An Invariant Approach To Statistical Analysis Of Shapes
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An Invariant Approach to Statistical Analysis of Shapes by Subhash R. Lele,Joan T. Richtsmeier Pdf
Natural scientists perceive and classify organisms primarily on the basis of their appearance and structure- their form , defined as that characteristic remaining invariant after translation, rotation, and possibly reflection of the object. The quantitative study of form and form change comprises the field of morphometrics. For morphometrics to suc
Statistics and Analysis of Shapes by Hamid Krim,Anthony Yezzi Pdf
The subject of pattern analysis and recognition pervades many aspects of our daily lives, including user authentication in banking, object retrieval from databases in the consumer sector, and the omnipresent surveillance and security measures around sensitive areas. Shape analysis, a fundamental building block in many approaches to these applications, is also used in statistics, biomedical applications (Magnetic Resonance Imaging), and many other related disciplines. With contributions from some of the leading experts and pioneers in the field, this self-contained, unified volume is the first comprehensive treatment of theory, methods, and algorithms available in a single resource. Developments are discussed from a rapidly increasing number of research papers in diverse fields, including the mathematical and physical sciences, engineering, and medicine.
Parametric and Nonparametric Inference for Statistical Dynamic Shape Analysis with Applications by Chiara Brombin,Luigi Salmaso,Lara Fontanella,Luigi Ippoliti,Caterina Fusilli Pdf
This book considers specific inferential issues arising from the analysis of dynamic shapes with the attempt to solve the problems at hand using probability models and nonparametric tests. The models are simple to understand and interpret and provide a useful tool to describe the global dynamics of the landmark configurations. However, because of the non-Euclidean nature of shape spaces, distributions in shape spaces are not straightforward to obtain. The book explores the use of the Gaussian distribution in the configuration space, with similarity transformations integrated out. Specifically, it works with the offset-normal shape distribution as a probability model for statistical inference on a sample of a temporal sequence of landmark configurations. This enables inference for Gaussian processes from configurations onto the shape space. The book is divided in two parts, with the first three chapters covering material on the offset-normal shape distribution, and the remaining chapters covering the theory of NonParametric Combination (NPC) tests. The chapters offer a collection of applications which are bound together by the theme of this book. They refer to the analysis of data from the FG-NET (Face and Gesture Recognition Research Network) database with facial expressions. For these data, it may be desirable to provide a description of the dynamics of the expressions, or testing whether there is a difference between the dynamics of two facial expressions or testing which of the landmarks are more informative in explaining the pattern of an expression.
Permutation Tests in Shape Analysis by LUIGI SALMASO,Chiara Brombin Pdf
Statistical shape analysis is a geometrical analysis from a set of shapes in which statistics are measured to describe geometrical properties from similar shapes or different groups, for instance, the difference between male and female Gorilla skull shapes, normal and pathological bone shapes, etc. Some of the important aspects of shape analysis are to obtain a measure of distance between shapes, to estimate average shapes from a (possibly random) sample and to estimate shape variability in a sample[1]. One of the main methods used is principal component analysis. Specific applications of shape analysis may be found in archaeology, architecture, biology, geography, geology, agriculture, genetics, medical imaging, security applications such as face recognition, entertainment industry (movies, games), computer-aided design and manufacturing. This is a proposal for a new Brief on statistical shape analysis and the various new parametric and non-parametric methods utilized to facilitate shape analysis.
Statistical Shape Analysis by Ian L. Dryden,Kanti V. Mardia Pdf
A thoroughly revised and updated edition of this introduction to modern statistical methods for shape analysis Shape analysis is an important tool in the many disciplines where objects are compared using geometrical features. Examples include comparing brain shape in schizophrenia; investigating protein molecules in bioinformatics; and describing growth of organisms in biology. This book is a significant update of the highly-regarded `Statistical Shape Analysis’ by the same authors. The new edition lays the foundations of landmark shape analysis, including geometrical concepts and statistical techniques, and extends to include analysis of curves, surfaces, images and other types of object data. Key definitions and concepts are discussed throughout, and the relative merits of different approaches are presented. The authors have included substantial new material on recent statistical developments and offer numerous examples throughout the text. Concepts are introduced in an accessible manner, while retaining sufficient detail for more specialist statisticians to appreciate the challenges and opportunities of this new field. Computer code has been included for instructional use, along with exercises to enable readers to implement the applications themselves in R and to follow the key ideas by hands-on analysis. Statistical Shape Analysis: with Applications in R will offer a valuable introduction to this fast-moving research area for statisticians and other applied scientists working in diverse areas, including archaeology, bioinformatics, biology, chemistry, computer science, medicine, morphometics and image analysis .
Elastic Shape Analysis of Three-Dimensional Objects by Ian H. Jermyn,Sebastian Kurtek,Hamid Laga,Anuj Srivastava Pdf
Statistical analysis of shapes of 3D objects is an important problem with a wide range of applications. This analysis is difficult for many reasons, including the fact that objects differ in both geometry and topology. In this manuscript, we narrow the problem by focusing on objects with fixed topology, say objects that are diffeomorphic to unit spheres, and develop tools for analyzing their geometries. The main challenges in this problem are to register points across objects and to perform analysis while being invariant to certain shape-preserving transformations. We develop a comprehensive framework for analyzing shapes of spherical objects, i.e., objects that are embeddings of a unit sphere in ℝ, including tools for: quantifying shape differences, optimally deforming shapes into each other, summarizing shape samples, extracting principal modes of shape variability, and modeling shape variability associated with populations. An important strength of this framework is that it is elastic: it performs alignment, registration, and comparison in a single unified framework, while being invariant to shape-preserving transformations. The approach is essentially Riemannian in the following sense. We specify natural mathematical representations of surfaces of interest, and impose Riemannian metrics that are invariant to the actions of the shape-preserving transformations. In particular, they are invariant to reparameterizations of surfaces. While these metrics are too complicated to allow broad usage in practical applications, we introduce a novel representation, termed square-root normal fields (SRNFs), that transform a particular invariant elastic metric into the standard L2 metric. As a result, one can use standard techniques from functional data analysis for registering, comparing, and summarizing shapes. Specifically, this results in: pairwise registration of surfaces; computation of geodesic paths encoding optimal deformations; computation of Karcher means and covariances under the shape metric; tangent Principal Component Analysis (PCA) and extraction of dominant modes of variability; and finally, modeling of shape variability using wrapped normal densities. These ideas are demonstrated using two case studies: the analysis of surfaces denoting human bodies in terms of shape and pose variability; and the clustering and classification of the shapes of subcortical brain structures for use in medical diagnosis. This book develops these ideas without assuming advanced knowledge in differential geometry and statistics. We summarize some basic tools from differential geometry in the appendices, and introduce additional concepts and terminology as needed in the individual chapters.
Progress in Geomathematics by Graeme Bonham-Carter,Cheng Qiuming Pdf
Celebrating Frits Agterberg’s half-century of publication activity in geomathematics, this volume’s 28 timely papers, written by his friends and colleagues, treat a variety of subjects of current interest, many of them also studied by Frits, including: spatial analysis in mineral resource assessment, quantitative stratigraphy, nonlinear multifractal models, compositional data analysis, time series analysis, image analysis, and geostatistics. Professor Agterberg published his first paper as a graduate student in 1958 and has since produced (and continues to publish) a steady stream of research papers on a wide variety of subjects of interest to geomathematical practitioners. Most of the papers included here address methodology and feature practical case studies, so that the book likely has broad appeal to those interested in mathematical geosciences, both to academic researchers seeking a comprehensive overview and also to practitioners of geomathematical approaches in industry.
Structural, Syntactic, and Statistical Pattern Recognition by Dit-Yan Yeung,James T. Kwok,Ana Fred,Fabio Roli,Dick de Ridder Pdf
This is the proceedings of the 11th International Workshop on Structural and Syntactic Pattern Recognition, SSPR 2006 and the 6th International Workshop on Statistical Techniques in Pattern Recognition, SPR 2006, held in Hong Kong, August 2006 alongside the Conference on Pattern Recognition, ICPR 2006. 38 revised full papers and 61 revised poster papers are included, together with 4 invited papers covering image analysis, character recognition, bayesian networks, graph-based methods and more.
Modern Morphometrics in Physical Anthropology by Dennis E. Slice Pdf
Morphometrics has undergone a revolutionary transformation in the past two decades as new methods have been developed to address shortcomings in the traditional multivirate analysis of linear distances, angles, and indices. While there is much active research in the field, the new approaches to shape analysis are already making significant and ever-increasing contributions to biological research, including physical anthropology. Modern Morphometrics in Physical Anthropology highlights the basic machinery of the most important methods, while introducing novel extensions to these methods and illustrating how they provide enhanced results compared to more traditional approaches. Modern Morphometrics in Physical Anthropology provides a comprehensive sampling of the applications of modern, sophisticated methods of shape analysis in anthropology, and serves as a starting point for the exploration of these practices by students and researchers who might otherwise lack the local expertise or training to get started. This text is an important resource for the general morphometric community that includes ecologists, evolutionary biologists, systematists, and medical researchers.
Morphology of Condensed Matter by Klaus R. Mecke,Dietrich Stoyan Pdf
The morphology of spatially stuctured materials is a rapidly growing field of research at the interface of statistical physics, applied mathematics and materials science. A wide spectrum of applications encompasses the flow through porous and composite materials as well as microemulsions and foams. Written as a set of lectures and tutorial reviews leading up to the forefront of research, this book will be both a compendium for the experienced researcher as well as a high level introductory text for postgraduate students and nonspecialist researchers working in related areas.
With the rapid advances of technology, visualisation in the sciences using computers, is a rapidly expanding and evolving area. Visualisation in its broadest sense represents how objects, situations, applications, methodologies and information can be seen and presented. This proposal is to incorporate work in the field of biomedical visualisation and will encompass techniques of using computers to visualise information. This will include photogrammetry, virtual and augmented reality, 3D printing, e-tutorial and website design and digital reconstructions and animations. It will showcase research, innovations and current work in the field of biomedicine, life sciences, veterinary medicine and computing sciences presenting data in an innovative and engaging way to showcase complex data and information in an easier to access format.
"John Russ is the master of explaining how image processing gets applied to real-world situations. With Brent Neal, he’s done it again in Measuring Shape, this time explaining an expanded toolbox of techniques that includes useful, state-of-the-art methods that can be applied to the broad problem of understanding, characterizing, and measuring shape. He has a gift for finding the kernel of a particular algorithm, explaining it in simple terms, then giving concrete examples that are easily understood. His perspective comes from solving real-world problems and separating out what works in practice from what is just an abstract curiosity." —Tom Malzbender, Hewlett-Packard Laboratories, Palo Alto, California, USA Useful for those working in fields including industrial quality control, research, and security applications, Measuring Shape is a handbook for the practical application of shape measurement. Covering a wide range of shape measurements likely to be encountered in the literature and in software packages, this book presents an intentionally diverse set of examples that illustrate and enable readers to compare methods used for measurement and quantitative description of 2D and 3D shapes. It stands apart through its focus on examples and applications, which help readers quickly grasp the usefulness of presented techniques without having to approach them through the underlying mathematics. An elusive concept, shape is a principal governing factor in determining the behavior of objects and structures. Essential to recognizing and classifying objects, it is the central link in manmade and natural processes. Shape dictates everything from the stiffness of a construction beam, to the ability of a leaf to catch water, to the marketing and packaging of consumer products. This book emphasizes techniques that are quantitative and produce a meaningful yet compact set of numerical values that can be used for statistical analysis, comparison, correlation, classification, and identification. Written by two renowned authors from both industry and academia, this resource explains why users should select a particular method, rather than simply discussing how to use it. Showcasing each process in a clear, accessible, and well-organized way, they explore why a particular one might be appropriate in a given situation, yet a poor choice in another. Providing extensive examples, plus full mathematical descriptions of the various measurements involved, they detail the advantages and limitations of each method and explain the ways they can be implemented to discover important correlations between shape and object history or behavior. This uncommon assembly of information also includes sets of data on real-world objects that are used to compare the performance and utility of the various presented approaches.
Advances in Case-Based Reasoning by Peter Funk,Pedro A. González Calero Pdf
This book constitutes the refereed proceedings of the 7th European Conference on Case-Based Reasoning, ECCBR 2004, held in Madrid, Spain in August/September 2004. The 56 revised full papers presented together with an invited paper and the abstract of an invited talk were carefully reviewed and selected from 85 submissions. All current issues in case-based reasoning, ranging from theoretical and methodological issues to advanced applications in various fields are addressed.
Clothing for Children and Teenagers by Norsaadah Zakaria Pdf
Clothing for Children and Teenagers: Anthropometry, Sizing and Fit addresses the complexities of developing size specifications for clothing aimed at seven to seventeen year olds. Children and teenagers experience rapid physical growth and alterations in body shape as they develop—changes that pose significant challenges in creating apparel sizing systems. The book begins by introducing the principles of apparel fit and sizing systems. Drawing on the author’s own fieldwork, it goes on to discuss methods of conducting anthropometric surveys in children and teenagers, and techniques for analyzing the resulting data in order to produce successful sizing systems. Introduces the principles of apparel fit and sizing systems, and discusses methods of conducting anthropometric surveys in children and teenagers Offers systematic and comprehensive coverage of the complexities associated with clothing for children and teenagers Reviews techniques in analysis and classification of children and teenagers' body shapes and sizes Covers the development, designation, and validation of an apparel sizing system for children and teenagers
Geometric Morphometrics for Biologists by Miriam Zelditch,Donald L. Swiderski,H. David Sheets Pdf
The first edition of Geometric Morphometrics for Biologists has been the primary resource for teaching modern geometric methods of shape analysis to biologists who have a stronger background in biology than in multivariate statistics and matrix algebra. These geometric methods are appealing to biologists who approach the study of shape from a variety of perspectives, from clinical to evolutionary, because they incorporate the geometry of organisms throughout the data analysis. The second edition of this book retains the emphasis on accessible explanations, and the copious illustrations and examples of the first, updating the treatment of both theory and practice. The second edition represents the current state-of-the-art and adds new examples and summarizes recent literature, as well as provides an overview of new software and step-by-step guidance through details of carrying out the analyses. Contains updated coverage of methods, especially for sampling complex curves and 3D forms and a new chapter on applications of geometric morphometrics to forensics Offers a reorganization of chapters to streamline learning basic concepts Presents detailed instructions for conducting analyses with freely available, easy to use software Provides numerous illustrations, including graphical presentations of important theoretical concepts and demonstrations of alternative approaches to presenting results