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The proceedings were designed to bring together researchers who share a common interest in the quantitative description of the biological form. Participants came from very diverse disciplines such as agricultural genetics, botany, entomology, forensics, human anatomy, paleontology, human evolution, primatology, dentistry, etc. The participants applied various methodological approaches that are being increasingly used to describe aspects of the biological form. These techniques include neural networks, Fourier descriptors, shape mapping, genome-wide association studies (GWAS), Riemann curves, surface mapping, etc. A number of the contributions in the proceedings represent state of the art research that reflects advances in that discipline. Contents:Botanical Studies:Leaf StructuresAgricultural CropsEntomological ExplorationsGenomic Shape ConsiderationsZoological InquiriesHuman Morphological Investigations:Facial MorphologyCranial Structures in 3-DWhole Body Studies Readership: Graduate students and researchers in human biology, genetics and genomics, plant science and agricultural science, evolution biology and dentistry and sports medicine. Keywords:Biological Shape Analysis;Agricultural Genetics;Botany;Entomology;Forensics;Physical Anthropology;Paleontology;Human Anatomy;Fourier Analysis;Applied Mathematics;Morphometrics
This proceedings volume describes the current state of research dealing with biological shape analysis. The quantitative analysis of the shape of biological organisms represents a challenge that has now seen breakthroughs with new methodologies such as elliptical Fourier analysis, quantitative trait loci analysis (QTLs), thin plate splines, etc. The volume also illustrates the diversity of disciplines that are actively involved in the characterization and analysis of the biological shape. Some of the papers deal with the need to relate the underlying genome responsible for the actual observed characteristics of form. Moreover, many of the papers focus on the relationship of the shape to the processes that determine the biological form, an issue of major continuing concern in biology. This volume brings together for the second time practitioners from a variety of disciplines who have been concerned with the necessity of applying new methods to the analysis of biological shape. Previous methodologies based on the conventional metrical approach (distances, angles and ratios), have not been able to adequately capture OCo in quantitative terms OCo the subtleties and complexities of biological form due to its irregularity. This volume represents an initial attempt to quantitatively characterize the biological form in both two- and three-dimensions, as it is actually perceived. There is no volume available that deals with the subject matter of these Proceedings. The papers represent, as in the first proceedings, a unique look at: (1) new methodologies developed and used quantitatively describe the biological form; (2) the need to relate the observed biological shape to the underlying processes that determine the shape; and (3) the tremendous diversity of disciplines actively involved in the characterization and analysis of biological shapes. These range from physical anthropology, anatomy, genetics, botany, entomology, forensics, to applied mathematics, etc.
Biological Shape Analysis - Proceedings Of The 4th International Symposium by Lestrel Pete E Pdf
This volume represents an ongoing series entitled Biological Shape Analysis, of which this is the 4th Edition. These proceedings represent state-of-the-art research in the field of biology, broadly-based, that deal with the quantitative analysis of the shape of the biological form. These numerical analyses include Fourier analytic methods, wavelets, neural networks, machine vision, machine learning, median axis transforms, spectral clustering, genome-wide association studies, 3D surface mapping, as well as more traditional morphometric approaches. Studies included are drawn from research in agricultural genetics, anatomy, anthropology, botany, dentistry, entomology, forensics, human evolution, paleontology, primatology, to name a few. The shape of forms can be considered of central importance in terms of identification, comparison, and classification of biological organisms. These proceedings, of which this is the fourth one, are unique in that they deal extensively with a wide range of organisms in biology, including both fauna and flora. They bring together diverse practitioners from a wide variety of disciplines. This represents a major departure from the current emphasis on specialization in the biological sciences. It is of particular importance to note that these issues dealing with shape analysis of biological structures are found to be common across very diverse disciplines and these proceedings are the first ones to highlight this. There are no volumes currently available that are as broadly-based as these proceedings in dealing with the quantification of shape analysis. (1) These volumes are unique in their diversity in covering the biological disciplines; (2) The emphasis on numerical approaches; and (3) the numerous state-of-the-art research papers.
This volume represents an ongoing series entitled Biological Shape Analysis, of which this is the 4th Edition. These proceedings represent state-of-the-art research in the field of biology, broadly-based, that deal with the quantitative analysis of the shape of the biological form. These numerical analyses include Fourier analytic methods, wavelets, neural networks, machine vision, machine learning, median axis transforms, spectral clustering, genome-wide association studies, 3D surface mapping, as well as more traditional morphometric approaches. Studies included are drawn from research in agricultural genetics, anatomy, anthropology, botany, dentistry, entomology, forensics, human evolution, paleontology, primatology, to name a few. The shape of forms can be considered of central importance in terms of identification, comparison, and classification of biological organisms. These proceedings, of which this is the fourth one, are unique in that they deal extensively with a wide range of organisms in biology, including both fauna and flora. They bring together diverse practitioners from a wide variety of disciplines. This represents a major departure from the current emphasis on specialization in the biological sciences. It is of particular importance to note that these issues dealing with shape analysis of biological structures are found to be common across very diverse disciplines and these proceedings are the first ones to highlight this. There are no volumes currently available that are as broadly-based as these proceedings in dealing with the quantification of shape analysis. (1) These volumes are unique in their diversity in covering the biological disciplines; (2) The emphasis on numerical approaches; and (3) the numerous state-of-the-art research papers.
The Proceedings describe the current state of research dealing with biological shape analysis. The quantitative analysis of the shape of biological organisms represents a challenge that has now seen breakthroughs with new methodologies such as elliptical Fourier analysis, quantitative trait loci analysis (QTLs), chromosome segment substitution lines (CSSLs), thin plate splines, etc. The Proceedings also illustrate the diversity of disciplines that are actively involved in the characterization and analysis of biological shape. Moreover, many of the papers focus on the relationship of the shape to the processes that determine the biological form, an issue of major continuing concern in biology.
"This volume represents an ongoing series entitled Biological Shape Analysis, of which this is the 4th Edition. These proceedings represent state-of-the-art research in the field of biology, broadly-based, that deal with the quantitative analysis of the shape of the biological form. These numerical analyses include Fourier analytic methods, wavelets, neural networks, machine vision, machine learning, median axis transforms, spectral clustering, genome-wide association studies, 3D surface mapping, as well as more traditional morphometric approaches. Studies included are drawn from research in agricultural genetics, anatomy, anthropology, botany, dentistry, entomology, forensics, human evolution, paleontology, primatology, to name a few. The shape of forms can be considered of central importance in terms of identification, comparison, and classification of biological organisms. These proceedings, of which this is the fourth one, are unique in that they deal extensively with a wide range of organisms in biology, including both fauna and flora. They bring together diverse practitioners from a wide variety of disciplines. This represents a major departure from the current emphasis on specialization in the biological sciences. It is of particular importance to note that these issues dealing with shape analysis of biological structures are found to be common across very diverse disciplines and these proceedings are the first ones to highlight this. There are no volumes currently available that are as broadly-based as these proceedings in dealing with the quantification of shape analysis. (1) These volumes are unique in their diversity in covering the biological disciplines; (2) The emphasis on numerical approaches; and (3) the numerous state-of-the-art research papers."--Publisher's website.
The Proceedings describe the current state of research dealing with biological shape analysis. The quantitative analysis of the shape of biological organisms represents a challenge that has now seen breakthroughs with new methodologies such as elliptical Fourier analysis, quantitative trait loci analysis (QTLs), chromosome segment substitution lines (CSSLs), thin plate splines, etc. The Proceedings also illustrate the diversity of disciplines that are actively involved in the characterization and analysis of biological shape. Moreover, many of the papers focus on the relationship of the shape to the processes that determine the biological form, an issue of major continuing concern in biology. Contents:Botanical Studies:Flowers and Leaf StructuresAgricultural CropsEntomological Studies:Shape of Stag BeetlesHuman Morphological Shape Studies:In a Forensic ContextSkull and CraniumShape of the Eye OrbitsShape of Long BonesGeometric Models of Shape Readership: Students, professionals and the general public with an interest in biology. Keywords:Biological Shape Analysis;Agricultural Genetics;Botany;Entomology;Forensics;Physical Anthropology;Human Anatomy;Fourier Analysis;Applied Mathematics;GeometryKey Features:Highlights new methodologies developed and used quantitatively to describe the biological formRelates the observed biological shape to the underlying processes that determine the shapeShow cases the tremendous diversity of disciplines actively involved in the characterization and analysis of biological shapes
This proceedings volume describes the current state of research dealing with biological shape analysis. The quantitative analysis of the shape of biological organisms represents a challenge that has now seen breakthroughs with new methodologies such as elliptical Fourier analysis, quantitative trait loci analysis (QTLs), thin plate splines, etc. The volume also illustrates the diversity of disciplines that are actively involved in the characterization and analysis of the biological shape. Some of the papers deal with the need to relate the underlying genome responsible for the actual observed characteristics of form. Moreover, many of the papers focus on the relationship of the shape to the processes that determine the biological form, an issue of major continuing concern in biology. This volume brings together for the second time practitioners from a variety of disciplines who have been concerned with the necessity of applying new methods to the analysis of biological shape. Previous methodologies based on the conventional metrical approach (distances, angles and ratios), have not been able to adequately capture — in quantitative terms — the subtleties and complexities of biological form due to its irregularity. This volume represents an initial attempt to quantitatively characterize the biological form in both two- and three-dimensions, as it is actually perceived. There is no volume available that deals with the subject matter of these Proceedings. The papers represent, as in the first proceedings, a unique look at: (1) new methodologies developed and used quantitatively describe the biological form; (2) the need to relate the observed biological shape to the underlying processes that determine the shape; and (3) the tremendous diversity of disciplines actively involved in the characterization and analysis of biological shapes. These range from physical anthropology, anatomy, genetics, botany, entomology, forensics, to applied mathematics, etc. Contents:Agricultural Crop Selection:Can Machine Vision Substitute for Plant Breeders' Eye? A Case of Whole Crop Shape Selection in Soybean Breeding (Seishi Ninomiya)Entomological Studies:Genetic Architecture of the Developmental Buffering Machinery for Wing Shape in Fruit Flies (K H Takahashi)Effect of Male Genital Spines on Female Remating Propensity in the West Indian Sweet Potato Weevil, Euscepes postfasciatus (N Kumano, T Kuriwada, K Shiromoto and H Tatsuta)Morphometric Studies on the Variation of Male Lucanid Beetle Mandibles (H Tatsuta, H Iwata and K Goka)Human Morphological Studies:Skull and Cranium: Craniofacial Morphology in Human Genetics (T Yamaguchi, R Kimura, A Kawaguchi, Y Tomoyasu and K Maki)Vertebral Morphology: An Application of Fourier Transform of Two-dimensional Images: A Case Study of Human Vertebral Tuberculosis of Hokkaido Ainu (O Kondo)Mandibular Studies: Representation of the Mandible as a Curve in 3-space: A Preliminary Study Using Fourier Descriptors (R Khullar, P E Lestrel, W Moon and C A Wolfe)Mandibular Studies: Mandibular Shape Analysis of Plio-Pleistocene Hominins: Fourier Descriptors in Norma lateralis (P E Lestrel, C A Wolfe and A Bodt)Whole Body Studies: Assessment of Body Image Perception: A Preliminary Study Using Elliptic Fourier Descriptors (P E Lestrel, N Miyake, M Ishihara and C A Wolfe)Primate Studies:Craniofacial Covariation in Extant Great Apes: A Geometric Morphometric Study (D Neaux, F Guy, E Gilissen, W Coudyzer, P Vignaud and S Ducrocq) Readership: Students and researchers in human biology, genetics and genomics, plant science and agricultural science, evolution biology and dentistry and sports medicine. Keywords:Biological Shape Analysis;Agricultural Genetics;Botany;Entomology;Forensics;Physical Anthropology;Human Anatomy;Dentistry;Medicine;Fourier Analysis;Applied Mathematics;GeometryKey Features:New methodologies developed and used quantitatively describe the biological formThe need to relate the observed biological shape to the underlying processes that determine the shapeThe tremendous diversity of disciplines actively involved in the characterization and analysis of biological shapes. These range from physical anthropology, anatomy, genetics, botany, entomology, forensics, applied mathematics, etc.
Geometric Morphometrics for Biologists by Miriam Leah Zelditch,Donald L. Swiderski,H. David Sheets Pdf
The first edition of Geometric Morphometrics for Biologists has been the primary resource for teaching modern geometric methods of shape analysis to biologists who have a stronger background in biology than in multivariate statistics and matrix algebra. These geometric methods are appealing to biologists who approach the study of shape from a variety of perspectives, from clinical to evolutionary, because they incorporate the geometry of organisms throughout the data analysis. The second edition of this book retains the emphasis on accessible explanations, and the copious illustrations and examples of the first, updating the treatment of both theory and practice. The second edition represents the current state-of-the-art and adds new examples and summarizes recent literature, as well as provides an overview of new software and step-by-step guidance through details of carrying out the analyses. Contains updated coverage of methods, especially for sampling complex curves and 3D forms and a new chapter on applications of geometric morphometrics to forensics Offers a reorganization of chapters to streamline learning basic concepts Presents detailed instructions for conducting analyses with freely available, easy to use software Provides numerous illustrations, including graphical presentations of important theoretical concepts and demonstrations of alternative approaches to presenting results
Shape Classification and Analysis by Luciano da Fona Costa,Roberto Marcond Cesar, Jr. Pdf
Because the properties of objects are largely determined by their geometric features, shape analysis and classification are essential to almost every applied scientific and technological area. A detailed understanding of the geometrical features of real-world entities (e.g., molecules, organs, materials and components) can provide important clues about their origin and function. When properly and carefully applied, shape analysis offers an exceedingly rich potential to yield useful applications in diverse areas ranging from material sciences to biology and neuroscience. Get Access to the Authors’ Own Cutting-Edge Open-Source Software Projects—and Then Actually Contribute to Them Yourself! The authors of Shape Analysis and Classification: Theory and Practice, Second Edition have improved the bestselling first edition by updating the tremendous progress in the field. This exceptionally accessible book presents the most advanced imaging techniques used for analyzing general biological shapes, such as those of cells, tissues, organs, and organisms. It implements numerous corrections and improvements—many of which were suggested by readers of the first edition—to optimize understanding and create what can truly be called an interactive learning experience. New Material in This Second Edition Addresses Graph and complex networks Dimensionality reduction Structural pattern recognition Shape representation using graphs Graphically reformulated, this edition updates equations, figures, and references, as well as slides that will be useful in related courses and general discussion. Like the popular first edition, this text is applicable to many fields and certain to become a favored addition to any library. Visit http://www.vision.ime.usp.br/~cesar/shape/ for Useful Software, Databases, and Videos
Systematics and the Exploration of Life by Philippe Grandcolas,Marie-Christine Maurel Pdf
This book's aim is to obtain and organize knowledge about the diversity of living things. Their epistomological and methodological fundamentals are explained in the framework of the biology of evolution. The methods of construction and use of phylogenetic trees are presented as well as the classification and description of taxa with the nomenclature rules.
Shape Analysis and Classification by Luciano da Fontoura Costa,Roberto Marcond Cesar Jr. Pdf
Advances in shape analysis impact a wide range of disciplines, from mathematics and engineering to medicine, archeology, and art. Anyone just entering the field, however, may find the few existing books on shape analysis too specific or advanced, and for students interested in the specific problem of shape recognition and characterization, traditio
Statistical Shape Analysis by Ian L. Dryden,Kanti V. Mardia Pdf
A thoroughly revised and updated edition of this introduction to modern statistical methods for shape analysis Shape analysis is an important tool in the many disciplines where objects are compared using geometrical features. Examples include comparing brain shape in schizophrenia; investigating protein molecules in bioinformatics; and describing growth of organisms in biology. This book is a significant update of the highly-regarded `Statistical Shape Analysis’ by the same authors. The new edition lays the foundations of landmark shape analysis, including geometrical concepts and statistical techniques, and extends to include analysis of curves, surfaces, images and other types of object data. Key definitions and concepts are discussed throughout, and the relative merits of different approaches are presented. The authors have included substantial new material on recent statistical developments and offer numerous examples throughout the text. Concepts are introduced in an accessible manner, while retaining sufficient detail for more specialist statisticians to appreciate the challenges and opportunities of this new field. Computer code has been included for instructional use, along with exercises to enable readers to implement the applications themselves in R and to follow the key ideas by hands-on analysis. Statistical Shape Analysis: with Applications in R will offer a valuable introduction to this fast-moving research area for statisticians and other applied scientists working in diverse areas, including archaeology, bioinformatics, biology, chemistry, computer science, medicine, morphometics and image analysis .
