Experimental And Theoretical Advances In Biological Pattern Formation

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Experimental and Theoretical Advances in Biological Pattern Formation

Hans G. Othmer,Philip K. Maini,James D. Murray
Experimental and Theoretical Advances in Biological Pattern Formation Book PDF

Author : Hans G. Othmer,Philip K. Maini,James D. Murray
Publisher : Springer Science & Business Media
Page : 384 pages
File Size : 42,7 Mb
Release : 2012-12-06
Category : Science
ISBN : 9781461524335

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Experimental and Theoretical Advances in Biological Pattern Formation by Hans G. Othmer,Philip K. Maini,James D. Murray Pdf

This volume contains the proceedings of the NATO ARW on 'Biological Pattern Formation' held at Merton College, University of Oxford, on 27-31 August, 1992. The objective of the workshop was to bring together a select group of theoreticians and experimental biologists to present the latest results in the area of biological pattern formation and to foster interactiqn across dis- plines. The workshop was divided into 5 main areas: (i) limb development, (ii) Dictyostelium discoideum, (iii) Drosophila, (iv) cell movement, (v) g- eral pattern formation. We thank all the participants for their contributions, enthusiasm, and willingness to collaborate. There was a genuine, open, and extremely fru- ful interaction between the experimentalists and theoreticians which made the workshop a success. We also thank The Welcome Trust for providing additional funding. The local organization fell mainly on Denise McKittrick and Beverley Bhaskhare at the Mathematical Institute, Oxford, and Jeanette Hudson and the staff of Merton College. We greatly appreciate their help and patience. We also thank Jonathan Sherratt, Wendy Brandts and Debbie Benson for helping out in the conference and for providing a happy welcome to parti- pants on a typically cold, wet and windy English summer day.

Morphogenesis and Pattern Formation in Biological Systems

T. Sekimura,S. Noji,N. Ueno,Philip Maini
Morphogenesis and Pattern Formation in Biological Systems Book PDF

Author : T. Sekimura,S. Noji,N. Ueno,Philip Maini
Publisher : Springer Science & Business Media
Page : 391 pages
File Size : 53,6 Mb
Release : 2013-11-11
Category : Mathematics
ISBN : 9784431659587

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Morphogenesis and Pattern Formation in Biological Systems by T. Sekimura,S. Noji,N. Ueno,Philip Maini Pdf

A central goal of biology is to decode the mechanisms that underlie the processes of morphogenesis and pattern formation. Concerned with the analysis of those phenomena, this book integrates experimental and theoretical aspects of biology for the construction and investigation of models of complex processes. It offers an interdisciplinary approach to the pattern formation problems and provides a scope of forthcoming integrated biology including experiments and theories.

Symmetry Breaking in Cells and Tissues

Andrew B. Goryachev
Symmetry Breaking in Cells and Tissues Book PDF

Author : Andrew B. Goryachev
Publisher : MDPI
Page : 322 pages
File Size : 46,9 Mb
Release : 2021-03-12
Category : Science
ISBN : 9783036503387

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Symmetry Breaking in Cells and Tissues by Andrew B. Goryachev Pdf

“Symmetry Breaking in Cells and Tissues” presents a collection of seventeen reviews, opinions and original research papers contributed by theoreticians, physicists and mathematicians, as well as experimental biologists, united by a common interest in biological pattern formation and morphogenesis. The contributors discuss diverse manifestations of symmetry breaking in biology and showcase recent developments in experimental and theoretical approaches to biological morphogenesis and pattern formation on multiple scales.

Cellular Automaton Modeling of Biological Pattern Formation

Andreas Deutsch,Sabine Dormann
Cellular Automaton Modeling of Biological Pattern Formation Book PDF

Author : Andreas Deutsch,Sabine Dormann
Publisher : Birkhäuser
Page : 464 pages
File Size : 51,5 Mb
Release : 2018-03-09
Category : Mathematics
ISBN : 9781489979803

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Cellular Automaton Modeling of Biological Pattern Formation by Andreas Deutsch,Sabine Dormann Pdf

This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews

Mathematical Models for Biological Pattern Formation

Philip K. Maini,Hans G. Othmer
Mathematical Models for Biological Pattern Formation Book PDF

Author : Philip K. Maini,Hans G. Othmer
Publisher : Springer Science & Business Media
Page : 327 pages
File Size : 55,6 Mb
Release : 2012-12-06
Category : Mathematics
ISBN : 9781461301332

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Mathematical Models for Biological Pattern Formation by Philip K. Maini,Hans G. Othmer Pdf

This 121st IMA volume, entitled MATHEMATICAL MODELS FOR BIOLOGICAL PATTERN FORMATION is the first of a new series called FRONTIERS IN APPLICATION OF MATHEMATICS. The FRONTIERS volumes are motivated by IMA pro grams and workshops, but are specially planned and written to provide an entree to and assessment of exciting new areas for the application of mathematical tools and analysis. The emphasis in FRONTIERS volumes is on surveys, exposition and outlook, to attract more mathematicians and other scientists to the study of these areas and to focus efforts on the most important issues, rather than papers on the most recent research results aimed at an audience of specialists. The present volume of peer-reviewed papers grew out of the 1998-99 IMA program on "Mathematics in Biology," in particular the Fall 1998 em phasis on "Theoretical Problems in Developmental Biology and Immunol ogy." During that period there were two workshops on Pattern Formation and Morphogenesis, organized by Professors Murray, Maini and Othmer. James Murray was one of the principal organizers for the entire year pro gram. I am very grateful to James Murray for providing an introduction, and to Philip Maini and Hans Othmer for their excellent work in planning and preparing this first FRONTIERS volume. I also take this opportunity to thank the National Science Foundation, whose financial support of the IMA made the Mathematics in Biology pro gram possible.

Nonlinear Dynamics and Pattern Formation in the Natural Environment

A. Van Harten,A. Doelman
Nonlinear Dynamics and Pattern Formation in the Natural Environment Book PDF

Author : A. Van Harten,A. Doelman
Publisher : Taylor & Francis
Page : 350 pages
File Size : 43,6 Mb
Release : 2022-09-16
Category : Mathematics
ISBN : 9781351428262

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Nonlinear Dynamics and Pattern Formation in the Natural Environment by A. Van Harten,A. Doelman Pdf

This Research Note aims to provide an insight into recent developments in the theory of pattern formation. In the last decade there has been considerable progress in this field, both from a theoretical and a practical point of view. Recent mathematical developments concern the study of the nonlinear stability of systems at near-critical conditions by an appropriate system of modulation equations. The complexity of the original problem can be reduced drastically by this approximation. Moreover, it provides unifying point of view for a wide range of problems. New applications of the theory arise in a multitude of scientific areas such as hydrodynamics, reaction-diffusion problems, oceanography, meteorology, combustion, geophysical and biological morphodynamics and semi-conductors.This book is intended to show the interactions between the mathematical theory of nonlinear dynamics and the study of pattern generating phenomena in the natural environment. There is an intimate relationship between new insights in the mathematical aspects of nonlinear pattern formation and the comprehension of such phenomena. Therefore there are two partly overlapping main themes: one in which the emphasis is on generally applicable mathematical theories and techniques and one in which the phenomenology of pattern evolution in various areas is discussed.The book comprises 19 contributions by experts in the field. Although the emphasis changes considerably from paper to paper, in each contribution the same two themes are present; all the authors have aimed to achieve a suitable balance between the mathematical theory and the physical phenomena.

Cellular Automaton Modeling of Biological Pattern Formation

Andreas Deutsch,Sabine Dormann
Cellular Automaton Modeling of Biological Pattern Formation Book PDF

Author : Andreas Deutsch,Sabine Dormann
Publisher : Springer Science & Business Media
Page : 331 pages
File Size : 48,9 Mb
Release : 2007-12-26
Category : Science
ISBN : 9780817644154

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Cellular Automaton Modeling of Biological Pattern Formation by Andreas Deutsch,Sabine Dormann Pdf

This book focuses on a challenging application field of cellular automata: pattern formation in biological systems, such as the growth of microorganisms, dynamics of cellular tissue and tumors, and formation of pigment cell patterns. These phenomena, resulting from complex cellular interactions, cannot be deduced solely from experimental analysis, but can be more easily examined using mathematical models, in particular, cellular automaton models. While there are various books treating cellular automaton modeling, this interdisciplinary work is the first one covering biological applications. The book is aimed at researchers, practitioners, and students in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science interested in a cellular automaton approach to biological modeling.

Using the Mathematics Literature

Kristine K. Fowler
Using the Mathematics Literature Book PDF

Author : Kristine K. Fowler
Publisher : CRC Press
Page : 412 pages
File Size : 51,9 Mb
Release : 2004-05-25
Category : Language Arts & Disciplines
ISBN : 0824750357

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Using the Mathematics Literature by Kristine K. Fowler Pdf

This reference serves as a reader-friendly guide to every basic tool and skill required in the mathematical library and helps mathematicians find resources in any format in the mathematics literature. It lists a wide range of standard texts, journals, review articles, newsgroups, and Internet and database tools for every major subfield in mathematics and details methods of access to primary literature sources of new research, applications, results, and techniques. Using the Mathematics Literature is the most comprehensive and up-to-date resource on mathematics literature in both print and electronic formats, presenting time-saving strategies for retrieval of the latest information.

Nonlinear Dynamics and Pattern Formation in Semiconductors and Devices

Franz-Josef Niedernostheide
Nonlinear Dynamics and Pattern Formation in Semiconductors and Devices Book PDF

Author : Franz-Josef Niedernostheide
Publisher : Springer Science & Business Media
Page : 279 pages
File Size : 51,5 Mb
Release : 2013-03-08
Category : Technology & Engineering
ISBN : 9783642795060

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Nonlinear Dynamics and Pattern Formation in Semiconductors and Devices by Franz-Josef Niedernostheide Pdf

In Nonlinear Dynamics and Pattern Formation in Semiconductors and Devices the contributions of the International Conference on Nonlinear Dynamics and Pattern Formation in the Natural Environment (ICPF '94) in Noordwijkerhout, held by many internationally reknown experts, are compiled. To connect the field of semiconductor physics with the theory of nonequilibrium dissipative systems, the emphasis lies on the study of localized structures, their stability and bifurcation behaviour. A point of special interest is the evolution of dynamic structures and the investigation of more complex structures arising from interactions between these structures. Possible applications of nonlinear effects and self-organization phenomena with respect to signal processing are discussed.

Formal Descriptions of Developing Systems

James Nation,Irina Trofimova,John D. Rand,William Sulis
Formal Descriptions of Developing Systems Book PDF

Author : James Nation,Irina Trofimova,John D. Rand,William Sulis
Publisher : Springer Science & Business Media
Page : 306 pages
File Size : 42,8 Mb
Release : 2012-12-06
Category : Mathematics
ISBN : 9789401000642

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Formal Descriptions of Developing Systems by James Nation,Irina Trofimova,John D. Rand,William Sulis Pdf

A cutting-edge survey of formal methods directed specifically at dealing with the deep mathematical problems engendered by the study of developing systems, in particular dealing with developing phase spaces, changing components, structures and functionalities, and the problem of emergence. Several papers deal with the modelling of particular experimental situations in population biology, economics and plant and muscle developments in addition to purely theoretical approaches. Novel approaches include differential inclusions and viability theory, growth tensors, archetypal dynamics, ensembles with variable structures, and complex system models. The papers represent the work of theoreticians and experimental biologists, psychologists and economists. The areas covered embrace complex systems, the development of artificial life, mathematics, computer science, biology and psychology.

Physical Theory in Biology

Charles J Lumsden,Lynn E H Trainor,Wendy A Brandts
Physical Theory in Biology Book PDF

Author : Charles J Lumsden,Lynn E H Trainor,Wendy A Brandts
Publisher : World Scientific
Page : 504 pages
File Size : 48,6 Mb
Release : 1997-04-19
Category : Science
ISBN : 9789814546331

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Physical Theory in Biology by Charles J Lumsden,Lynn E H Trainor,Wendy A Brandts Pdf

What is the physics of life and why does it matter? The essays in this book probe this question, celebrating modern biology's vibrant dialog with theoretical physics — a scientific adventure in which biological understanding is enriched by physical theory without losing its own inherent traditions and perspectives. The book explores organic complexity and self-organization through research applications to embryology, cell biology, behavioral neuroscience, and evolution. The essays will excite the interest of physics students in thinking about biology's “grand challenges”, in part by means of self-contained introductions to theoretical computer science, symmetry methods in bifurcation theory, and evolutionary games. Seasoned investigators in both the physical and life sciences will also find challenging ideas and applications presented in this volume. This is a Print On Demand title. We no longer stock the original but will recreate a copy for you. While all efforts are made to ensure that quality is the same as the original, there may be differences in some areas of the design and packaging. Contents:Foundations:Emergence in Physics and Biology (L E H Trainor)Holism and Reduction (C J Lumsden)Complexity: A Pluralistic Approach (W A M Brandts)Dynamics, Complexity and Computation (P A Dufort & C J Lumsden)Development: Field Approaches to Pattern Formation:Vector Field Models of Morphogenesis (W A M Brandts & J Totafurno)Symmetry Breaking Bifurcations (T M Hart & L E H Trainor)Development: Principles of Self-Organization:Generic Dynamics of Morphogenesis (B Goodwin)Toward a Model of Growth and Form in Living Systems (F Cummings)Living Organization, the Coherence of Organisms and the Morphogenetic Field (M W Ho et al.)Is Spatial Pattern Formation Homologous in Unicellular and Multicellular Organisms? (J Frankel)Cellular and Organismic Biology:Statistical Mechanics of the Main Phase Transition in Lipid Bilayers (F P Jones & P Tevlin)Multi-Neuron Interactions in Neural Network Models of Associative Memory (A E Busch & L E H Trainor)Network Hierarchies in Neural Organization, Development and Pathology (J P Sutton)Category Switching — A Neural Network Approach (L E H Trainor et al.)Evolution:A Model of Molecular Evolution Based on the Statistical Analysis of Nucleotide Sequences (L Luo)Codon Space: Exploring the Origins and Development of the Genetic Code (L E H Trainor et al.)Evolution of Development: The Shuffling of Ancient Modules by Ubiquitous Bureaucracies (E W Larsen)Game Theory in Biology (G W A Rowe) Readership: Physicial scientists, biologists, engineers, applied mathematicians and philosophers. keywords:Holism and Reductionism;Complexity;Symmetry;Emergent Property;Patterns;Neural Interactions;Statistical Models;Game Theory;Biology;Morphogenesis;Morphogens;Pattern Formation;Development;Epithelia Folding;Biological Modeling;Complexity;Physical Theory;Biological Regulation;Pattern Formation;Nonlinear Dynamics;Evolution;Developmental Field;Neural Networks;Collective Behavior;Genetic Code;Emergence;Reductionism;Holism;Self-Organization;Bifurcation Theory;Morphogenetic Field;Regeneration;Phase Transitions in Bilayers;Task Switching;Nucleotide Sequences;Molecular Evolution “The important issue here is not what physics theory has done for biology (which is not very much), but what it can do in the future, and to this end the book does a marvellous job of defining the arena.” Nature “… the scope of the articles is broad … The book should be of interest to scientists coming from biological, physical and mathematical sciences.”Bulletin for Mathematical Biology

Evolving Pathways

Giuseppe Fusco
Evolving Pathways Book PDF

Author : Giuseppe Fusco
Publisher : Cambridge University Press
Page : 405 pages
File Size : 50,9 Mb
Release : 2008-01-10
Category : Science
ISBN : 9781139468275

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Evolving Pathways by Giuseppe Fusco Pdf

Evolutionary developmental biology, or 'evo-devo', is the study of the relationship between evolution and development. Dealing specifically with the generative mechanisms of organismal form, evo-devo goes straight to the core of the developmental origin of variation, the raw material on which natural selection (and random drift) can work. Evolving Pathways brings together contributions that represent a diversity of approaches. Topics range from developmental genetics to comparative morphology of animals and plants alike, and also include botany and palaeontology, two disciplines for which the potential to be examined from an evo-devo perspective has largely been ignored until now. Researchers and graduate students will find this book a valuable overview of current research as we begin to fill a major gap in our perception of evolutionary change.

The Shaping of Life

Lionel G. Harrison
The Shaping of Life Book PDF

Author : Lionel G. Harrison
Publisher : Cambridge University Press
Page : 273 pages
File Size : 52,7 Mb
Release : 2010-12-23
Category : Science
ISBN : 9781139494458

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The Shaping of Life by Lionel G. Harrison Pdf

Biological development, how organisms acquire their form, is one of the great frontiers in science. While a vast knowledge of the molecules involved in development has been gained in recent decades, big questions remain on the molecular organization and physics that shape cells, tissues and organisms. Physical scientists and biologists traditionally have very different backgrounds and perspectives, yet some of the fundamental questions in developmental biology will only be answered by combining expertise from a range of disciplines. This book is a personal account by Professor Lionel Harrison of an interdisciplinary approach to studying biological pattern formation. It articulates the power of studying dynamics in development: that to understand how an organism is made we must not only know the structure of its molecules; we must also understand how they interact and how fast they do so.

Vascular Morphogenesis: In Vivo, In Vitro, In Mente

Vladimir Mironov,Charles Little,Helen Sage
Vascular Morphogenesis In Vivo In Vitro In Mente Book PDF

Author : Vladimir Mironov,Charles Little,Helen Sage
Publisher : Springer Science & Business Media
Page : 271 pages
File Size : 46,8 Mb
Release : 2012-12-06
Category : Science
ISBN : 9781461241560

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Vascular Morphogenesis: In Vivo, In Vitro, In Mente by Vladimir Mironov,Charles Little,Helen Sage Pdf

The overall scope of this new series will be to evolve an understanding of the genetic basis of (1) how early mesoderm commits to cells of a heart lineage that progressively and irreversibly assemble into a segmented, primary heart tube that can be remodeled into a four-chambered organ, and (2) how blood vessels are derived and assembled both in the heart and in the body. Our central aim is to establish a four-dimensional, spatiotemporal foundation for the heart and blood vessels that can be genetically dissected for function and mechanism. Since Robert DeHaan's seminal chapter "Morphogenesis of the Vertebrate Heart" pub lished in Organogenesis (Holt Reinhart & Winston, NY) in 1965, there have been surprisingly few books devoted to the subject of cardiovascular morphogenesis, despite the enormous growth of interest that occurred nationally and internationally. Most writings on the subject have been schol arly compilations of the proceedings of major national or international symposia or multiauthored volumes, often without a specific theme. What is missing are the unifying concepts that can make sense out of a burgeoning database of facts. The Editorial Board of this new series believes the time has come for a book series dedicated to cardiovascular morphogenesis that will serve not only as an important archival and didactic reference source for those who have recently come into the field but also as a guide to the evolution of a field that is clearly coming of age.

Microbial Signalling and Communication

Society for General Microbiology. Symposium
Microbial Signalling and Communication Book PDF

Author : Society for General Microbiology. Symposium
Publisher : Cambridge University Press
Page : 386 pages
File Size : 42,7 Mb
Release : 1999-05-06
Category : Medical
ISBN : 0521652618

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Microbial Signalling and Communication by Society for General Microbiology. Symposium Pdf

Presents information at the forefront of this exciting field and includes contributions on a range of organisms and signalling molecules.