Genome Analysis Of Trembling Aspen And Bigtooth Aspen Using Molecular Genetic Markers

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Molecular Marker Techniques

Author : Nitish Kumar
Publisher : Springer Nature
Page : 367 pages
File Size : 53,6 Mb
Release : 2023-06-29
Category : Technology & Engineering
ISBN : 9789819916122

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Molecular Marker Techniques by Nitish Kumar Pdf

This edited book covers the applications of molecular markers in the genetic improvement of crop plants. Recent advances in molecular marker techniques such as the development of high-throughput genotyping platforms, marker-assisted selection, and non-coding RNA-based markers have been discussed. Essential information is provided on functional markers, genotype-by-sequencing, and association mapping methodologies that can facilitate accelerated crop breeding programs for increased yield, high nutritional quality, and tolerance to a variety of abiotic and biotic stresses. This volume presents basic information on molecular marker techniques from marker location up to gene cloning. The book includes a description of technical approaches in genome analysis such as comparison of marker systems, positional cloning, and array techniques. This book is of interest to teachers, researchers, and plant breeders. The book also serves as additional reading material for undergraduate and graduate students of agriculture, horticulture, and forestry.

Molecular Evolution, Producing the Biochemical Data

Author : Anonim
Publisher : Elsevier
Page : 896 pages
File Size : 54,6 Mb
Release : 2005-06-15
Category : Science
ISBN : 9780080455150

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Molecular Evolution, Producing the Biochemical Data by Anonim Pdf

The critically acclaimed laboratory standard, Methods in Enzymology, is one of the most highly respected publications in the field of biochemistry. Since 1955, each volume has been eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. The series contains much material still relevant today - truly an essential publication for researchers in all fields of life sciences. Molecular Evolution Producing the Biochemical Data part B is a continuation of methods published in Part A (1993, volume 224). The work is a very methodological look at markers, templates, genomes, datasets and analyses used in studies of biological diversity. * One of the most highly respected publications in the field of biochemistry since 1955 * Frequently consulted, and praised by researchers and reviewers alike * Truly an essential publication for anyone in any field of the life sciences

Molecular Markers in Plant Genetics and Biotechnology

Author : Domonique de Vienne
Publisher : CRC Press
Page : 248 pages
File Size : 46,7 Mb
Release : 2003-01-01
Category : Science
ISBN : 9781482279979

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Molecular Markers in Plant Genetics and Biotechnology by Domonique de Vienne Pdf

The first chapter details the different techniques of molecular markers, emphasizing genetic aspects, because these determine the type of use one can put it to. The construction of genetic linkage maps is the subject of the second chapter, where the advantages and disadvantages of the most common mapping populations are specified. The particular ca

Micropropagation, Genetic Engineering, and Molecular Biology of Populus

Author : Anonim
Publisher : Unknown
Page : 348 pages
File Size : 51,9 Mb
Release : 1997
Category : Forests and forestry
ISBN : MINN:31951D01562413D

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Micropropagation, Genetic Engineering, and Molecular Biology of Populus by Anonim Pdf

Thirty-four Populus biotechnology chapters, written by 85 authors, are comprised in 5 sections: 1) in vitro culture (micropropagation, somatic embryogenesis, protoplasts, somaclonal variation, and germplasm preservation); 2) transformation and foreign gene expression; 3) molecular biology (molecular/genetic characterization); 4) biotic and abiotic resistance (disease, insect, and pollution); and 5) biotechnological applications (wood properties, flowering, phytoremediation, breeding, commercialization, economics, and bioethics).

Genetic analysis of aspen (Populus tremula L. and Populus tremuloides Michx.) in a diversity experiment

Author : Chunxia Zhang
Publisher : Cuvillier Verlag
Page : 126 pages
File Size : 52,6 Mb
Release : 2012-08-28
Category : Science
ISBN : 9783736942042

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Genetic analysis of aspen (Populus tremula L. and Populus tremuloides Michx.) in a diversity experiment by Chunxia Zhang Pdf

Poplars are model tree species in ecological and genetic studies since they are widely distributed, easy to propagate, and since more genetic and genomic resources are available for poplars than for any other woody plant genus. The poplar diversity experiment (POPDIV) has been established with European and North American aspen (Populus tremula L., P. tremuloides Michx.) planted in plots representing either a single deme only or combinations of two, four and eight demes in order to test the influence of intraspecific genetic diversity on ecosystem functions and services. In the present study, the most commonly used molecular markers, SSRs (simple sequence repeats) and AFLPs (amplified fragment length polymorphisms), were applied to conduct the genetic analysis of the POPDIV experiment. Both markers identified clonal structures in one Swedish deme and these clones are non-randomly distributed in the POPDIV experimental field. Large differences with regard to the genetic diversity within aspen demes were observed. The genetic diversity estimates based on SSR and AFLP markers showed a high correlation. The North American P. tremuloides deme had the highest level of genetic diversity; most private alleles both at SSRs and AFLPs were also observed in this deme which confirmed that it represents another species different from the European P. tremula. An analysis of molecular variance (AMOVA) revealed that most of the total genetic diversity was found within demes by both SSR and AFLP markers, but the genetic differentiation among demes was also high. Pairwise FST values between demes showed highly significant differentiation at both SSRs and AFLPs. As expected, the P. tremuloides deme was strongly differentiated from the other P. tremula demes. UPGMA dendrograms based on genetic distances obtained from both markers showed that the North American P. tremuloides deme is obviously outgrouped from the other European P. tremula demes with high bootstrap support values. The complex patterns of genetic diversity and differentiation resulted in large differences of the genetic variation within plots. Genetic diversities within plots with a given number of demes were highly variable. Across all plots, those with a single German deme and those with two demes showed the lowest and highest level of genetic diversity, respectively. The plots containing the North American P. tremuloides deme showed higher levels of genetic diversity compared to the plots including only P. tremula demes, which was obviously shown at AFLPs. For the plots with a given number of demes (1, 2, 4, 8), their average genetic diversity values were increased with increasing number of demes included within plots. However, the genetic variation within plots strongly depended on the specific mixture, and the highest diversities were observed for plots with only two demes mixed. Paternity analysis revealed different numbers of paternal trees contributed to both German single tree progenies, the deme with a high number of pollen donors showed high level of genetic diversity. The sibship reconstruction revealed a higher number of full sibling groups for the North American P. tremuloides deme compared to other demes. Across demes, the genetic diversity revealed by AFLP markers showed a positive correlation with the number of full sibling groups, indicating that the number of full sibling groups reflects the effective number of population size which directly determines the level of genetic diversity. In conclusion, the high and variable levels of genetic diversity observed within all demes need to be considered in assessments of the impact of intraspecific diversity of poplars on the diversity of the associated organisms and ecosystem functions and services. The genetic diversity in a plot strongly depends on the specific combination of demes; the number of demes included within a plot is a poor predictor of its diversity.

Molecular Systematics and Plant Evolution

Author : Peter M. Hollingsworth,Richard M. Bateman,Richard J. Gornall
Publisher : CRC Press
Page : 508 pages
File Size : 40,9 Mb
Release : 1999-08-19
Category : Science
ISBN : 1439833273

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Molecular Systematics and Plant Evolution by Peter M. Hollingsworth,Richard M. Bateman,Richard J. Gornall Pdf

Molecular Systematics and Plant Evolution discusses the diversity and evolution of plants with a molecular approach. It looks at population genetics, phylogeny (history of evolution) and developmental genetics, to provide a framework from which to understand evolutionary patterns and relationships amongst plants. The international panel of contributors are all respected systematists and evolutionary biologists, who have brought together a wide range of topics from the forefront of research while keeping the text accessible to students. It has been written for senior undergraduates, postgraduates and researchers in the fields of botany, systematics, population / conservation genetics, phylogenetics and evolutionary biology.

General Technical Report RM.

Author : Anonim
Publisher : Unknown
Page : 576 pages
File Size : 50,7 Mb
Release : 1997
Category : Forests and forestry
ISBN : UOM:39015046277037

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General Technical Report RM. by Anonim Pdf

Molecular Tools for Screening Biodiversity

Author : A. Karp,D.S. Ingram,Peter G. Isaac
Publisher : Springer Science & Business Media
Page : 482 pages
File Size : 53,9 Mb
Release : 2012-12-06
Category : Nature
ISBN : 9789400900196

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Molecular Tools for Screening Biodiversity by A. Karp,D.S. Ingram,Peter G. Isaac Pdf

Mark Chase There are many literature resources available to molecular biologists wishing to assess genetic variation, but the myriad of techniques and approaches potentially available to the plant breeder and the evolutionary biologist is truly bewildering, and most have never been evaluated side-by-side on the same sets of samples. Additionally, it is often not recognized that tools that are useful for breeders can often be adapted for use in evolutionary studies and vice versa, but this is generally the case. The borderline between population genetics and phylogenetics is vague and difficult to assess, and a combination of both types of tools is best when it is not clear with which area one is dealing. Furthermore, it is not now appropriate to use just one type of marker in any kind of study; most markers have the potential to misinform under certain conditions, so it is always wise to incorporate at least two different types of assessments into any project. This volume is designed to facilitate this sort of multiple approach and provides comparative data on most currently available methods so that researchers can more intelligently select those appropriate to their area of interest, regardless of whether it is in the realm of breeding or evolutionary biology.

Textbook of Biodiversity

Author : K V Krishnamurthy
Publisher : CRC Press
Page : 276 pages
File Size : 48,6 Mb
Release : 2003-01-10
Category : Science
ISBN : 9781482280180

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Textbook of Biodiversity by K V Krishnamurthy Pdf

A comprehensive text and reference book covering all the aspects of biodiversity science for students and researchers of biodiversity, plant science, biotechnology, as well as zoology.

DNA Fingerprinting in Plants and Fungi

Author : Kurt Weising,Hilde Nybom,Markus Pfenninger,Kirsten Wolff,Wieland Meyer
Publisher : CRC Press
Page : 340 pages
File Size : 45,9 Mb
Release : 1994-11-22
Category : Science
ISBN : 0849389208

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DNA Fingerprinting in Plants and Fungi by Kurt Weising,Hilde Nybom,Markus Pfenninger,Kirsten Wolff,Wieland Meyer Pdf

This exciting new book describes the use of DNA fingerprinting and its application in a wide area of plant and fungal research. It presents a thorough theoretical introduction to DNA fingerprinting, the practical aspects of extraction of DNA from the plant or fungus under study, and the statistical analysis of the data. An overview presents all species to which DNA fingerprinting is currently being applied and highlights many future technical developments.

Genetics, Genomics and Breeding of Poplar

Author : C. P. Joshi,Stephen P. DiFazio,Chittaranjan Kole
Publisher : CRC Press
Page : 396 pages
File Size : 51,7 Mb
Release : 2011-03-29
Category : Science
ISBN : 9781439869178

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Genetics, Genomics and Breeding of Poplar by C. P. Joshi,Stephen P. DiFazio,Chittaranjan Kole Pdf

Written by researchers representing six countries and 28 institutions, this book highlights the development of the genus Populus as a model organism for tree genomics. Reflecting an impressive depth of coverage, the contributors' thorough reviews and analyses of Populus genomics provide insight into future discoveries about the basic biology of thi

Dissertation Abstracts International

Author : Anonim
Publisher : Unknown
Page : 796 pages
File Size : 49,7 Mb
Release : 1993
Category : Dissertations, Academic
ISBN : STANFORD:36105020027491

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Dissertation Abstracts International by Anonim Pdf

Genetics and Genomics of Populus

Author : Stefan Jansson,Rishikesh Bhalerao,Andrew Groover
Publisher : Springer
Page : 384 pages
File Size : 45,5 Mb
Release : 2010-03-02
Category : Science
ISBN : 9781441915412

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Genetics and Genomics of Populus by Stefan Jansson,Rishikesh Bhalerao,Andrew Groover Pdf

Genetics and Genomics of Populus provides an indepth description of the genetic and genomic tools and approaches for Populus, examines the biology that has been elucidated using genomics, and looks to the future of this unique model plant. This volume is designed to serve both experienced Populus researchers and newcomers to the field. Contributors to the volume are a blend of researchers, some who have spent most of their research career on Populus and others that have moved to Populus from other model systems. Research on Populus forms a useful complement to research on Arabidopsis. In fact, many plant species found in nature are – in terms of the life history and genetics – more similar to Populus than to Arabidopsis. Thus, the genetic and genomic strategies and tools developed by the Populus community, and showcased in this volume, will hopefully provide inspiration for researchers working in other, less well developed, systems.