Introduction To Nonparametric Statistics For The Biological Sciences Using R
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Introduction to Nonparametric Statistics for the Biological Sciences Using R by Thomas W. MacFarland,Jan M. Yates Pdf
This book contains a rich set of tools for nonparametric analyses, and the purpose of this text is to provide guidance to students and professional researchers on how R is used for nonparametric data analysis in the biological sciences: To introduce when nonparametric approaches to data analysis are appropriate To introduce the leading nonparametric tests commonly used in biostatistics and how R is used to generate appropriate statistics for each test To introduce common figures typically associated with nonparametric data analysis and how R is used to generate appropriate figures in support of each data set The book focuses on how R is used to distinguish between data that could be classified as nonparametric as opposed to data that could be classified as parametric, with both approaches to data classification covered extensively. Following an introductory lesson on nonparametric statistics for the biological sciences, the book is organized into eight self-contained lessons on various analyses and tests using R to broadly compare differences between data sets and statistical approach.
Nonparametric Statistics with Applications to Science and Engineering with R by Paul Kvam,Brani Vidakovic,Seong-joon Kim Pdf
NONPARAMETRIC STATISTICS WITH APPLICATIONS TO SCIENCE AND ENGINEERING WITH R Introduction to the methods and techniques of traditional and modern nonparametric statistics, incorporating R code Nonparametric Statistics with Applications to Science and Engineering with R presents modern nonparametric statistics from a practical point of view, with the newly revised edition including custom R functions implementing nonparametric methods to explain how to compute them and make them more comprehensible. Relevant built-in functions and packages on CRAN are also provided with a sample code. R codes in the new edition not only enable readers to perform nonparametric analysis easily, but also to visualize and explore data using R’s powerful graphic systems, such as ggplot2 package and R base graphic system. The new edition includes useful tables at the end of each chapter that help the reader find data sets, files, functions, and packages that are used and relevant to the respective chapter. New examples and exercises that enable readers to gain a deeper insight into nonparametric statistics and increase their comprehension are also included. Some of the sample topics discussed in Nonparametric Statistics with Applications to Science and Engineering with R include: Basics of probability, statistics, Bayesian statistics, order statistics, Kolmogorov–Smirnov test statistics, rank tests, and designed experiments Categorical data, estimating distribution functions, density estimation, least squares regression, curve fitting techniques, wavelets, and bootstrap sampling EM algorithms, statistical learning, nonparametric Bayes, WinBUGS, properties of ranks, and Spearman coefficient of rank correlation Chi-square and goodness-of-fit, contingency tables, Fisher exact test, MC Nemar test, Cochran’s test, Mantel–Haenszel test, and Empirical Likelihood Nonparametric Statistics with Applications to Science and Engineering with R is a highly valuable resource for graduate students in engineering and the physical and mathematical sciences, as well as researchers who need a more comprehensive, but succinct understanding of modern nonparametric statistical methods.
Using R for Biostatistics by Thomas W. MacFarland,Jan M. Yates Pdf
This book introduces the open source R software language that can be implemented in biostatistics for data organization, statistical analysis, and graphical presentation. In the years since the authors’ 2014 work Introduction to Data Analysis and Graphical Presentation in Biostatistics with R, the R user community has grown exponentially and the R language has increased in maturity and functionality. This updated volume expands upon skill-sets useful for students and practitioners in the biological sciences by describing how to work with data in an efficient manner, how to engage in meaningful statistical analyses from multiple perspectives, and how to generate high-quality graphics for professional publication of their research. A common theme for research in the diverse biological sciences is that decision-making depends on the empirical use of data. Beginning with a focus on data from a parametric perspective, the authors address topics such as Student t-Tests for independent samples and matched pairs; oneway and twoway analyses of variance; and correlation and linear regression. The authors also demonstrate the importance of a nonparametric perspective for quality assurance through chapters on the Mann-Whitney U Test, Wilcoxon Matched-Pairs Signed-Ranks test, Kruskal-Wallis H-Test for Oneway Analysis of Variance, and the Friedman Twoway Analysis of Variance. To address the element of data presentation, the book also provides an extensive review of the many graphical functions available with R. There are now perhaps more than 15,000 external packages available to the R community. The authors place special emphasis on graphics using the lattice package and the ggplot2 package, as well as less common, but equally useful, figures such as bean plots, strip charts, and violin plots. A robust package of supplementary material, as well as an introduction of the development of both R and the discipline of biostatistics, makes this ideal for novice learners as well as more experienced practitioners.
Biostatistics with R is designed around the dynamic interplay among statistical methods, their applications in biology, and their implementation. The book explains basic statistical concepts with a simple yet rigorous language. The development of ideas is in the context of real applied problems, for which step-by-step instructions for using R and R-Commander are provided. Topics include data exploration, estimation, hypothesis testing, linear regression analysis, and clustering with two appendices on installing and using R and R-Commander. A novel feature of this book is an introduction to Bayesian analysis. This author discusses basic statistical analysis through a series of biological examples using R and R-Commander as computational tools. The book is ideal for instructors of basic statistics for biologists and other health scientists. The step-by-step application of statistical methods discussed in this book allows readers, who are interested in statistics and its application in biology, to use the book as a self-learning text.
Nonparametric Statistics for Health Care Research by Marjorie A. Pett Pdf
What do you do when you realize that the data set from the study that you have just completed violates the sample size or other requirements needed to apply parametric statistics? Nonparametric Statistics for Health Care Research by Marjorie A. Pett was developed for such scenarios—research undertaken with limited funds, often using a small sample size, with the primary objective of improving client care and obtaining better client outcomes. Covering the most commonly used nonparametric statistical techniques available in statistical packages and on open-resource statistical websites, this well-organized and accessible Second Edition helps readers, including those beyond the health sciences field, to understand when to use a particular nonparametric statistic, how to generate and interpret the resulting computer printouts, and how to present the results in table and text format.
An Introduction to Statistical Analysis in Research, Optimized Edition by Kathleen F. Weaver,Vanessa C. Morales,Sarah L. Dunn,Kanya Godde,Pablo F. Weaver Pdf
Provides well-organized coverage of statistical analysis and applications in biology, kinesiology, and physical anthropology with comprehensive insights into the techniques and interpretations of R, SPSS®, Excel®, and Numbers® output An Introduction to Statistical Analysis in Research: With Applications in the Biological and Life Sciences develops a conceptual foundation in statistical analysis while providing readers with opportunities to practice these skills via research-based data sets in biology, kinesiology, and physical anthropology. Readers are provided with a detailed introduction and orientation to statistical analysis as well as practical examples to ensure a thorough understanding of the concepts and methodology. In addition, the book addresses not just the statistical concepts researchers should be familiar with, but also demonstrates their relevance to real-world research questions and how to perform them using easily available software packages including R, SPSS®, Excel®, and Numbers®. Specific emphasis is on the practical application of statistics in the biological and life sciences, while enhancing reader skills in identifying the research questions and testable hypotheses, determining the appropriate experimental methodology and statistical analyses, processing data, and reporting the research outcomes. In addition, this book: • Aims to develop readers’ skills including how to report research outcomes, determine the appropriate experimental methodology and statistical analysis, and identify the needed research questions and testable hypotheses • Includes pedagogical elements throughout that enhance the overall learning experience including case studies and tutorials, all in an effort to gain full comprehension of designing an experiment, considering biases and uncontrolled variables, analyzing data, and applying the appropriate statistical application with valid justification • Fills the gap between theoretically driven, mathematically heavy texts and introductory, step-by-step type books while preparing readers with the programming skills needed to carry out basic statistical tests, build support figures, and interpret the results • Provides a companion website that features related R, SPSS, Excel, and Numbers data sets, sample PowerPoint® lecture slides, end of the chapter review questions, software video tutorials that highlight basic statistical concepts, and a student workbook and instructor manual An Introduction to Statistical Analysis in Research: With Applications in the Biological and Life Sciences is an ideal textbook for upper-undergraduate and graduate-level courses in research methods, biostatistics, statistics, biology, kinesiology, sports science and medicine, health and physical education, medicine, and nutrition. The book is also appropriate as a reference for researchers and professionals in the fields of anthropology, sports research, sports science, and physical education. KATHLEEN F. WEAVER, PhD, is Associate Dean of Learning, Innovation, and Teaching and Professor in the Department of Biology at the University of La Verne. The author of numerous journal articles, she received her PhD in Ecology and Evolutionary Biology from the University of Colorado. VANESSA C. MORALES, BS, is Assistant Director of the Academic Success Center at the University of La Verne. SARAH L. DUNN, PhD, is Associate Professor in the Department of Kinesiology at the University of La Verne and is Director of Research and Sponsored Programs. She has authored numerous journal articles and received her PhD in Health and Exercise Science from the University of New South Wales. KANYA GODDE, PhD, is Assistant Professor in the Department of Anthropology and is Director/Chair of Institutional Review Board at the University of La Verne. The author of numerous j
An Introduction to Nonparametric Statistics by John E. Kolassa Pdf
This textbook presents techniques for statistical analysis in the absence of strong assumptions about the distributions generating the data. Rank-based and resampling techniques are heavily represented, but robust techniques are considered as well. These techniques include one-sample testing and estimation, multi-sample testing and estimation, and regression. Attention is payed to the intellectual development of the field, with a thorough review of bibliographical references. Computational tools, in R and SAS, are developed and illustrated via examples. Exercises designed to reinforce examples are included. Important techniques covered include Rank-based techniques, including sign, Kruskal-Wallis, Friedman, Mann-Whitney and Wilcoxon tests, are presented. Tests are inverted to produce estimates and confidence intervals. Multivariate tests are explored. Techniques reflecting the dependence of a response variable on explanatory variables are presented. Density estimation is explored. The bootstrap and jackknife are discussed. This text is intended for a graduate student in applied statistics. The course is best taken after an introductory course in statistical methodology, a course in elementary probability, and a course in regression. Mathematical prerequisites include calculus through multivariate differentiation and integration, and, ideally, a course in matrix algebra.
Nonparametric Statistical Methods by Myles Hollander,Douglas A. Wolfe,Eric Chicken Pdf
Praise for the Second Edition “This book should be an essential part of the personal library of every practicing statistician.”—Technometrics Thoroughly revised and updated, the new edition of Nonparametric Statistical Methods includes additional modern topics and procedures, more practical data sets, and new problems from real-life situations. The book continues to emphasize the importance of nonparametric methods as a significant branch of modern statistics and equips readers with the conceptual and technical skills necessary to select and apply the appropriate procedures for any given situation. Written by leading statisticians, Nonparametric Statistical Methods, Third Edition provides readers with crucial nonparametric techniques in a variety of settings, emphasizing the assumptions underlying the methods. The book provides an extensive array of examples that clearly illustrate how to use nonparametric approaches for handling one- or two-sample location and dispersion problems, dichotomous data, and one-way and two-way layout problems. In addition, the Third Edition features: The use of the freely available R software to aid in computation and simulation, including many new R programs written explicitly for this new edition New chapters that address density estimation, wavelets, smoothing, ranked set sampling, and Bayesian nonparametrics Problems that illustrate examples from agricultural science, astronomy, biology, criminology, education, engineering, environmental science, geology, home economics, medicine, oceanography, physics, psychology, sociology, and space science Nonparametric Statistical Methods, Third Edition is an excellent reference for applied statisticians and practitioners who seek a review of nonparametric methods and their relevant applications. The book is also an ideal textbook for upper-undergraduate and first-year graduate courses in applied nonparametric statistics.
Applied Statistics with R by Justin C. Touchon Pdf
The statistical analyses that students of the life-sciences are being expected to perform are becoming increasingly advanced. Whether at the undergraduate, graduate, or post-graduate level, this book provides the tools needed to properly analyze your data in an efficient, accessible, plainspoken, frank, and occasionally humorous manner, ensuring that readers come away with the knowledge of which analyses they should use and when they should use them. The book uses the statistical language R, which is the choice of ecologists worldwide and is rapidly becoming the 'go-to' stats program throughout the life-sciences. Furthermore, by using a single, real-world dataset throughout the book, readers are encouraged to become deeply familiar with an imperfect but realistic set of data. Indeed, early chapters are specifically designed to teach basic data manipulation skills and build good habits in preparation for learning more advanced analyses. This approach also demonstrates the importance of viewing data through different lenses, facilitating an easy and natural progression from linear and generalized linear models through to mixed effects versions of those same analyses. Readers will also learn advanced plotting and data-wrangling techniques, and gain an introduction to writing their own functions. Applied Statistics with R is suitable for senior undergraduate and graduate students, professional researchers, and practitioners throughout the life-sciences, whether in the fields of ecology, evolution, environmental studies, or computational biology.
Nonparametric Statistics by Jean Dickinson Gibbons Pdf
Through the use of actual research investigations that have appeared in recent social science journals, Gibbons shows the reader the specific methodology and logical rationale for many of the best-known and most frequently used nonparametric methods that are applicable to most small and large sample sizes. The methods are organized according to the type of sample structure that produced the data to be analyzed, and the inference types covered are limited to location tests, such as the sign test, the Mann-Whitney-Wilcoxon test, the Kruskal-Wallis test and Friedman's test. The formal introduction of each test is followed by a data example, calculated first by hand and then by computer.
Nonparametric Statistics for Non-Statisticians by Gregory W. Corder,Dale I. Foreman Pdf
A practical and understandable approach to nonparametric statistics for researchers across diverse areas of study As the importance of nonparametric methods in modern statistics continues to grow, these techniques are being increasingly applied to experimental designs across various fields of study. However, researchers are not always properly equipped with the knowledge to correctly apply these methods. Nonparametric Statistics for Non-Statisticians: A Step-by-Step Approach fills a void in the current literature by addressing nonparametric statistics in a manner that is easily accessible for readers with a background in the social, behavioral, biological, and physical sciences. Each chapter follows the same comprehensive format, beginning with a general introduction to the particular topic and a list of main learning objectives. A nonparametric procedure is then presented and accompanied by context-based examples that are outlined in a step-by-step fashion. Next, SPSS® screen captures are used to demonstrate how to perform and recognize the steps in the various procedures. Finally, the authors identify and briefly describe actual examples of corresponding nonparametric tests from diverse fields. Using this organized structure, the book outlines essential skills for the application of nonparametric statistical methods, including how to: Test data for normality and randomness Use the Wilcoxon signed rank test to compare two related samples Apply the Mann-Whitney U test to compare two unrelated samples Compare more than two related samples using the Friedman test Employ the Kruskal-Wallis H test to compare more than two unrelated samples Compare variables of ordinal or dichotomous scales Test for nominal scale data A detailed appendix provides guidance on inputting and analyzing the presented data using SPSS®, and supplemental tables of critical values are provided. In addition, the book's FTP site houses supplemental data sets and solutions for further practice. Extensively classroom tested, Nonparametric Statistics for Non-Statisticians is an ideal book for courses on nonparametric statistics at the upper-undergraduate and graduate levels. It is also an excellent reference for professionals and researchers in the social, behavioral, and health sciences who seek a review of nonparametric methods and relevant applications.
Nonparametric Statistics with Applications to Science and Engineering with R by Paul Kvam,Brani Vidakovic,Seong-joon Kim Pdf
NONPARAMETRIC STATISTICS WITH APPLICATIONS TO SCIENCE AND ENGINEERING WITH R Introduction to the methods and techniques of traditional and modern nonparametric statistics, incorporating R code Nonparametric Statistics with Applications to Science and Engineering with R presents modern nonparametric statistics from a practical point of view, with the newly revised edition including custom R functions implementing nonparametric methods to explain how to compute them and make them more comprehensible. Relevant built-in functions and packages on CRAN are also provided with a sample code. R codes in the new edition not only enable readers to perform nonparametric analysis easily, but also to visualize and explore data using R’s powerful graphic systems, such as ggplot2 package and R base graphic system. The new edition includes useful tables at the end of each chapter that help the reader find data sets, files, functions, and packages that are used and relevant to the respective chapter. New examples and exercises that enable readers to gain a deeper insight into nonparametric statistics and increase their comprehension are also included. Some of the sample topics discussed in Nonparametric Statistics with Applications to Science and Engineering with R include: Basics of probability, statistics, Bayesian statistics, order statistics, Kolmogorov–Smirnov test statistics, rank tests, and designed experiments Categorical data, estimating distribution functions, density estimation, least squares regression, curve fitting techniques, wavelets, and bootstrap sampling EM algorithms, statistical learning, nonparametric Bayes, WinBUGS, properties of ranks, and Spearman coefficient of rank correlation Chi-square and goodness-of-fit, contingency tables, Fisher exact test, MC Nemar test, Cochran’s test, Mantel–Haenszel test, and Empirical Likelihood Nonparametric Statistics with Applications to Science and Engineering with R is a highly valuable resource for graduate students in engineering and the physical and mathematical sciences, as well as researchers who need a more comprehensive, but succinct understanding of modern nonparametric statistical methods.
Recipient of a 2021 Most Promising New Textbook Award from the Textbook & Academic Authors Association (TAA) "Statistics with R is easily the most accessible and almost fun introduction to statistics and R that I have read. Even the most hesitant student is likely to embrace the material with this text." —David A.M. Peterson, Department of Political Science, Iowa State University Drawing on examples from across the social and behavioral sciences, Statistics with R: Solving Problems Using Real-World Data introduces foundational statistics concepts with beginner-friendly R programming in an exploration of the world’s tricky problems faced by the "R Team" characters. Inspired by the programming group "R Ladies," the R Team works together to master the skills of statistical analysis and data visualization to untangle real-world, messy data using R. The storylines draw students into investigating contemporary issues such as marijuana legalization, voter registration, and the opioid epidemic, and lead them step-by-step through full-color illustrations of R statistics and interactive exercises. Included with this title: The password-protected Instructor Resource Site (formally known as SAGE Edge) offers access to all text-specific resources, including a test bank and editable, chapter-specific PowerPoint® slides.
Nonparametric Statistical Methods Using R by John Kloke,Joseph McKean Pdf
Praise for the first edition: “This book would be especially good for the shelf of anyone who already knows nonparametrics, but wants a reference for how to apply those techniques in R.” -The American Statistician This thoroughly updated and expanded second edition of Nonparametric Statistical Methods Using R covers traditional nonparametric methods and rank-based analyses. Two new chapters covering multivariate analyses and big data have been added. Core classical nonparametrics chapters on one- and two-sample problems have been expanded to include discussions on ties as well as power and sample size determination. Common machine learning topics --- including k-nearest neighbors and trees --- have also been included in this new edition. Key Features: Covers a wide range of models including location, linear regression, ANOVA-type, mixed models for cluster correlated data, nonlinear, and GEE-type. Includes robust methods for linear model analyses, big data, time-to-event analyses, timeseries, and multivariate. Numerous examples illustrate the methods and their computation. R packages are available for computation and datasets. Contains two completely new chapters on big data and multivariate analysis. The book is suitable for advanced undergraduate and graduate students in statistics and data science, and students of other majors with a solid background in statistical methods including regression and ANOVA. It will also be of use to researchers working with nonparametric and rank-based methods in practice.
Introduction to Nonparametric Regression by K. Takezawa Pdf
An easy-to-grasp introduction to nonparametric regression This book's straightforward, step-by-step approach provides an excellent introduction to the field for novices of nonparametric regression. Introduction to Nonparametric Regression clearly explains the basic concepts underlying nonparametric regression and features: * Thorough explanations of various techniques, which avoid complex mathematics and excessive abstract theory to help readers intuitively grasp the value of nonparametric regression methods * Statistical techniques accompanied by clear numerical examples that further assist readers in developing and implementing their own solutions * Mathematical equations that are accompanied by a clear explanation of how the equation was derived The first chapter leads with a compelling argument for studying nonparametric regression and sets the stage for more advanced discussions. In addition to covering standard topics, such as kernel and spline methods, the book provides in-depth coverage of the smoothing of histograms, a topic generally not covered in comparable texts. With a learning-by-doing approach, each topical chapter includes thorough S-Plus? examples that allow readers to duplicate the same results described in the chapter. A separate appendix is devoted to the conversion of S-Plus objects to R objects. In addition, each chapter ends with a set of problems that test readers' grasp of key concepts and techniques and also prepares them for more advanced topics. This book is recommended as a textbook for undergraduate and graduate courses in nonparametric regression. Only a basic knowledge of linear algebra and statistics is required. In addition, this is an excellent resource for researchers and engineers in such fields as pattern recognition, speech understanding, and data mining. Practitioners who rely on nonparametric regression for analyzing data in the physical, biological, and social sciences, as well as in finance and economics, will find this an unparalleled resource.