Omics For Environmental Engineering And Microbiology Systems

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Omics for Environmental Engineering and Microbiology Systems

Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas
Omics for Environmental Engineering and Microbiology Systems Book PDF

Author : Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas
Publisher : CRC Press
Page : 630 pages
File Size : 41,5 Mb
Release : 2022-11-07
Category : Medical
ISBN : 9781000737240

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Omics for Environmental Engineering and Microbiology Systems by Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas Pdf

Bioremediation using microbes is a sustainable technology for biodegradation of target compounds, and an omics approach gives more clarity on these microbial communities. This book provides insights into the complex behavior of microbial communities and identifies enzymes/metabolites and their degradation pathways. It describes the application of microbes and their derivatives for the bioremediation of potentially toxic and novel compounds. It highlights the existing technologies along with industrial practices and real-life case studies. Features: Includes recent research and development in the areas of omics and microbial bioremediation. Covers the broad environmental pollution control approaches such as metagenomics, metabolomics, fluxomics, bioremediation, and biodegradation of industrial wastes. Reviews metagenomics and waste management, and recycling for environmental cleanup. Describes the metagenomic methodologies and best practices, from sample collection to data analysis for taxonomies. Explores various microbial degradation pathways and detoxification mechanisms for organic and inorganic contaminants of wastewater with their gene expression. This book is aimed at graduate students and researchers in environmental engineering, soil remediation, hazardous waste management, environmental modeling, and wastewater treatment.

Environmental Microbiology for Engineers

Volodymyr Ivanov
Environmental Microbiology for Engineers Book PDF

Author : Volodymyr Ivanov
Publisher : CRC Press
Page : 438 pages
File Size : 50,7 Mb
Release : 2016-04-19
Category : Science
ISBN : 9781439895009

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Environmental Microbiology for Engineers by Volodymyr Ivanov Pdf

This book enables engineering students to understand how microbiology can be applied to environmental research and practical applications. Written specifically for senior undergraduate to graduate level civil and environmental engineering students, the textbook encompasses both fundamental and applied principles and covers topics such as the microbiology of water, wastewater, soil, and air biotreatment systems used in environmental engineering. It also covers civil engineering topics such as biocementation, biocorrosion, biofouling and biodeterioration of materials. Suitable for environmental engineers with little to no biology training, this book provides a thoroughly up-to-date introduction to current trends in environmental microbiology and engineering. Microbial classification is represented as a periodic table with theoretical connections between all prokaryotic groups and highlighting their environmental applications. The textbook includes quizzes for each chapter, tutorials and exam questions. A separate solutions manual is available with qualifying course adoption. Combining microbiological knowledge and environmental biotechnology principles in a readable fashion, the book includes topics such as Structures and functions of microbial cell and cell aggregates Applied microbial genetics and molecular biology Diversity and function of microorganisms in environmental engineering systems Environmental bioengineering processes Microbiological monitoring of environmental engineering systems Microbiology of water and wastewater treatment Biocementation and bioc1ogging of soil Biocorrosion of constructions Biodeterioration of materials Biopollution of indoor environment Bioremediation and biotransformation of solid waste and soil Ancillary Instructional Material: Quiz and Exam Bank As an instructor and an active participant in the environmental and civil engineering community, the author has recognized the need for field-specific microbiology instructional material, and has constructed a concise, relevant text for both students and professionals.

Omics Insights in Environmental Bioremediation

Vineet Kumar,Indu Shekhar Thakur
Omics Insights in Environmental Bioremediation Book PDF

Author : Vineet Kumar,Indu Shekhar Thakur
Publisher : Springer Nature
Page : 706 pages
File Size : 50,6 Mb
Release : 2022-09-26
Category : Science
ISBN : 9789811943201

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Omics Insights in Environmental Bioremediation by Vineet Kumar,Indu Shekhar Thakur Pdf

Environmental pollution emanating from rapid industrialization, population growth, and urbanization has been considered a major problem in recent years that affects biodiversity, ecosystems, and human health by contaminating soil and water. This book brings out a comprehensive collection of information on valuable insights into different cutting-edge omics technologies, such as metagenomics, metatranscriptomics, metaproteomics, and metabolomics, along with advanced next-generation sequencing technologies as well as bioinformatic tools, which led to a better understanding of microbial communities and their adaptability to a wide range of contaminants and underlying their mechanisms in bioremediation and biodegradation of environmental pollutants. In addition, this edited volume provides critical insight into of potent microbial communities endowed with unique functional attributes through their unique metabolism catalyzed by ‘signature’ enzymes and degradation pathways. Step-by-step descriptions are provided of various microbial metabolic pathways of degradation and biotransformation of environmental contaminants by numerous illustrations which make the information easier to understand for the readers. Each chapter is devoted to selected examples of microbial bioremediation supported by tables, and an extensive list of references for readers interested in learning further details about the subject matter. This book is of interest to teachers, researchers to professionals, policymakers, stockholders, practitioners, environmental engineers, soil scientists, and policymakers. In addition, the book serves as additional comprehensive material for undergraduate, graduate, and doctoral students who require a working knowledge and knowhow of ‘Omics’ involved in and required for environmental remediation of legacy and emerging contaminants, will also find this to be a useful read.

Microbial Community Studies in Industrial Wastewater Treatment

Maulin P. Shah
Microbial Community Studies in Industrial Wastewater Treatment Book PDF

Author : Maulin P. Shah
Publisher : CRC Press
Page : 253 pages
File Size : 47,6 Mb
Release : 2022-12-30
Category : Technology & Engineering
ISBN : 9781000815078

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Microbial Community Studies in Industrial Wastewater Treatment by Maulin P. Shah Pdf

Describes the state-of-the-art techniques and the application of omics tools in wastewater treatment reactors (WWTRs) Includes both the theoretical and practical knowledge on the fundamental roles of microorganisms in WWTRs Discusses environmental microbial community proteomics Covers relating function and community structure of complex microbial systems using neural networks Reviews the economics of wastewater treatment and the development of suitable alternatives in terms of performance and cost effectiveness

Machine Learning Methods for Multi-Omics Data Integration

Abedalrhman Alkhateeb,Luis Rueda
Machine Learning Methods for Multi Omics Data Integration Book PDF

Author : Abedalrhman Alkhateeb,Luis Rueda
Publisher : Springer Nature
Page : 171 pages
File Size : 41,9 Mb
Release : 2023-12-15
Category : Science
ISBN : 9783031365027

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Machine Learning Methods for Multi-Omics Data Integration by Abedalrhman Alkhateeb,Luis Rueda Pdf

The advancement of biomedical engineering has enabled the generation of multi-omics data by developing high-throughput technologies, such as next-generation sequencing, mass spectrometry, and microarrays. Large-scale data sets for multiple omics platforms, including genomics, transcriptomics, proteomics, and metabolomics, have become more accessible and cost-effective over time. Integrating multi-omics data has become increasingly important in many research fields, such as bioinformatics, genomics, and systems biology. This integration allows researchers to understand complex interactions between biological molecules and pathways. It enables us to comprehensively understand complex biological systems, leading to new insights into disease mechanisms, drug discovery, and personalized medicine. Still, integrating various heterogeneous data types into a single learning model also comes with challenges. In this regard, learning algorithms have been vital in analyzing and integrating these large-scale heterogeneous data sets into one learning model. This book overviews the latest multi-omics technologies, machine learning techniques for data integration, and multi-omics databases for validation. It covers different types of learning for supervised and unsupervised learning techniques, including standard classifiers, deep learning, tensor factorization, ensemble learning, and clustering, among others. The book categorizes different levels of integrations, ranging from early, middle, or late-stage among multi-view models. The underlying models target different objectives, such as knowledge discovery, pattern recognition, disease-related biomarkers, and validation tools for multi-omics data. Finally, the book emphasizes practical applications and case studies, making it an essential resource for researchers and practitioners looking to apply machine learning to their multi-omics data sets. The book covers data preprocessing, feature selection, and model evaluation, providing readers with a practical guide to implementing machine learning techniques on various multi-omics data sets.

Processing of Biomass Waste

Angana Sarkar,Ulla Lassi
Processing of Biomass Waste Book PDF

Author : Angana Sarkar,Ulla Lassi
Publisher : Elsevier
Page : 447 pages
File Size : 48,5 Mb
Release : 2024-04-26
Category : Technology & Engineering
ISBN : 9780323951807

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Processing of Biomass Waste by Angana Sarkar,Ulla Lassi Pdf

Processing of Biomass Waste: Technological Upgradation and Advancement focuses on the exploitation of various waste management technologies and their associated process (microbial/chemical/physical) as tools to simultaneously generate value during treatment processes, including degradation/detoxification/stabilization toxic and hazardous contaminants. The book explores wastes as a veritable resource for wealth creation, with particular focus on resources recoverable from diverse wastes using special intervention of biotechnological tools. Other sections highlight recent technologies of waste bioprocessing in biorefinery approaches and enlighten on different approaches. The book encompasses advanced and updated information as well as future directions for young researchers and scientists who are working in the field of waste management, with a focus on sustainable value generation. Includes cutting-edge technologies in waste bioprocessing Focuses on applications of molecular biotechnological tools in waste bioprocessing Provides natural and eco-friendly solutions to deal with the problem of pollution aiming value generation Details underlying mechanisms of waste bioprocessing approaches that cover microbes for the simultaneous value generation and removal of emerging contaminants Includes field studies on the application of biorefinery approach for eco-restoration of contaminated sites Presents recent advances and challenges in waste bioprocessing research and applications for sustainable development

Environmental Microbiology

Ian T. Paulsen,Andrew J. Holmes
Environmental Microbiology Book PDF

Author : Ian T. Paulsen,Andrew J. Holmes
Publisher : Humana
Page : 0 pages
File Size : 48,5 Mb
Release : 2016-08-27
Category : Science
ISBN : 1493959034

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Environmental Microbiology by Ian T. Paulsen,Andrew J. Holmes Pdf

An up-to-date view of molecular mechanisms for investigating microbial communities and their biological activities, this new volume of Environmental Microbiology: Methods and Protocols looks at recent advances that are having a big impact on the field such as metagenomics and other “omics” technologies, NanoSIMS, as well as stable isotope probing and more. Conveniently divided into four parts, the first section looks at methods involved in sampling environmental microorganisms, the second profiles different methods for investigating the diversity and composition of microbial communities, the third focuses on techniques for analyzing biological activities in situ, and the final section examines high throughput “omics” approaches for the characterization of environmental microbial communities. This book was written as part of the highly successful Methods in Molecular Biology series, and, as such, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Fully updated and authoritative, Environmental Microbiology: Methods and Protocols, Second Edition aims to provide an unprecedented glimpse into the structure, composition, and activity of microbial communities across diverse environments and illuminate their impact on global ecological processes.

Omics Technologies and Bio-engineering

Debmalya Barh,Vasco Ariston De Car Azevedo
Omics Technologies and Bio engineering Book PDF

Author : Debmalya Barh,Vasco Ariston De Car Azevedo
Publisher : Academic Press
Page : 645 pages
File Size : 49,9 Mb
Release : 2017-12-01
Category : Technology & Engineering
ISBN : 9780128047491

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Omics Technologies and Bio-engineering by Debmalya Barh,Vasco Ariston De Car Azevedo Pdf

Omics Technologies and Bio-Engineering: Towards Improving Quality of Life, Volume 1 is a unique reference that brings together multiple perspectives on omics research, providing in-depth analysis and insights from an international team of authors. The book delivers pivotal information that will inform and improve medical and biological research by helping readers gain more direct access to analytic data, an increased understanding on data evaluation, and a comprehensive picture on how to use omics data in molecular biology, biotechnology and human health care. Covers various aspects of biotechnology and bio-engineering using omics technologies Focuses on the latest developments in the field, including biofuel technologies Provides key insights into omics approaches in personalized and precision medicine Provides a complete picture on how one can utilize omics data in molecular biology, biotechnology and human health care

Advances in Plant Microbiome Research for Climate-Resilient Agriculture

Ashwani Kumar
Advances in Plant Microbiome Research for Climate Resilient Agriculture Book PDF

Author : Ashwani Kumar
Publisher : CRC Press
Page : 302 pages
File Size : 50,5 Mb
Release : 2024-08-07
Category : Science
ISBN : 9781040098530

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Advances in Plant Microbiome Research for Climate-Resilient Agriculture by Ashwani Kumar Pdf

This new book, Advances in Plant Microbiome Research for Climate-Resilient Agriculture: Toward Sustainable Farming, covers important aspects of plant microbiome research through contributions from scientists with the latest information available in this area of research. The book provides an introduction to the concept of plant microbiome and its importance for climate-resistant crop plants and discusses the tools and techniques to analyze plant microbiome for sustainable agriculture productivity. It covers microbial endophytes as warriors for plant defense against abiotic and biotic stress. The book also highlights the importance of phyto-microbiomes and presents an overview of the role of metabolomics in bioremediation for sustainable crop production, introducing various metabolomics tools such as GC-MS, LC-MS, and NMR for the sustainable remediation of toxic pollutants from the environment. Web sources and software for metabolomics data interpretation are included as well. The book discusses abiotic and biotic stresses and their effects on crops, the concept and strategies of the rhizosphere microbiome manipulation in crop improvement, the microbial traits in plant stress tolerance and their importance for agriculture, exogenous applications of several compounds and phyto-microbiomes that mitigate the negative effects of salt stress on maize, and the beneficial plant microbial association for sustainable agriculture. With its coverage of the recent research on the current methods and technological advancements for increasing plant resilience to adverse climate scenarios, this volume will be a rich resource for botanists, plant specialists, and researchers concerned with crop science, plant physiology, and plant protection.

Environmental Pollution Control Microbiology

Ross E. McKinney
Environmental Pollution Control Microbiology Book PDF

Author : Ross E. McKinney
Publisher : CRC Press
Page : 390 pages
File Size : 51,9 Mb
Release : 2004-03-11
Category : Technology & Engineering
ISBN : 9780824757977

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Environmental Pollution Control Microbiology by Ross E. McKinney Pdf

Compiling knowledge gained through more than 50 years of experience in environmental engineering technology, this book illustrates the application of fundamental concepts in microbiology to provide a sound basis for the design and operation of various biological systems used in solving environmental challenges in the air, water, and soil. Environmental Pollution Control Microbiology emphasizes the quantitative relationships of microbial growth and metabolism, beginning an examination of the overall metabolism and resulting growth of bacteria, fungi, algae, protozoa, rotifers, and other microorganisms and explains how bacteria bring about the stabilization of biodegradable organic pollutants.

Emerging Technologies in Applied and Environmental Microbiology

Maulin P Shah,B.R.M. Vyas
Emerging Technologies in Applied and Environmental Microbiology Book PDF

Author : Maulin P Shah,B.R.M. Vyas
Publisher : Elsevier
Page : 252 pages
File Size : 41,6 Mb
Release : 2023-01-06
Category : Science
ISBN : 9780323911436

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Emerging Technologies in Applied and Environmental Microbiology by Maulin P Shah,B.R.M. Vyas Pdf

Emerging Technologies in Applied and Environmental Microbiology describes various problems and solutions that arise in applied and environmental microbiology using scientific technologies. The book summarizes the main omic-based methods currently used to characterize environmental microorganisms, as well as approaches to analyzing and interpreting the bio information generated by experimentally based studies. Sections explore the current understanding of bacterial signaling through examples of communication systems that include signaling in gram-positive and gram-negative bacteria, along with discussions on how microorganisms interact with each other, with other organisms, and with the environment. In addition, this comprehensive resource highlights the importance of various emerging technologies for cleaning up pollution in the environment caused by human activities. Final sections assess the potential application of several existing, applied and environmental microbiological techniques and introduces new and emerging technologies through applied aspects. Describes various problems and solutions that arise in applied and environmental microbiology using scientific technologies Summarizes the main omics-based methods currently used to characterize environmental microorganisms, as well as approaches to analyzing and interpreting the bio information generated by experimentally based studies Explores the current understanding of bacterial signaling through examples of communication systems that include signaling in gram-positive and gram-negative bacteria Shows the presence of all kinds of microbes in the natural environment for the removal of organic pollutants through various emerging technologies

Microbiology and Parasitology for Environmental Engineering

Charles Monterio
Microbiology and Parasitology for Environmental Engineering Book PDF

Author : Charles Monterio
Publisher : Discovery Publishing House (India)
Page : 0 pages
File Size : 55,5 Mb
Release : 2024-04
Category : Fiction
ISBN : 8119205685

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Microbiology and Parasitology for Environmental Engineering by Charles Monterio Pdf

This book focuses on the practical understanding of microorganisms in civil and environmental engineering processes. It is designed for environmental engineers who work in wastewater treatment, solid waste treatment, soil remediation, and ground improvement. The chapters in the book are written by prominent leaders and scientists in the field of environmental microbiology and microbial technologies. The book provides insight into the functions of microorganisms in environmental engineering systems and their role in solving environmental pollution problems worldwide. It covers the latest developments in environmental microbiology and microbial technologies, providing readers with up-to-date information and research. Environmental engineers play a critical role in managing and protecting the environment. Microorganisms are essential components of environmental engineering systems, and understanding their functions is crucial for effective environmental management. This book provides valuable information on the use of microorganisms in environmental engineering systems and their role in solving environmental pollution problems.

OMICS

Debmalya Barh,Vasudeo Zambare,Vasco Azevedo
OMICS Book PDF

Author : Debmalya Barh,Vasudeo Zambare,Vasco Azevedo
Publisher : CRC Press
Page : 721 pages
File Size : 47,6 Mb
Release : 2013-03-26
Category : Medical
ISBN : 9781466562813

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OMICS by Debmalya Barh,Vasudeo Zambare,Vasco Azevedo Pdf

With the advent of new technologies and acquired knowledge, the number of fields in omics and their applications in diverse areas are rapidly increasing in the postgenomics era. Such emerging fields—including pharmacogenomics, toxicogenomics, regulomics, spliceomics, metagenomics, and environomics—present budding solutions to combat global challenges in biomedicine, agriculture, and the environment. OMICS: Applications in Biomedical, Agricultural, and Environmental Sciences provides valuable insights into the applications of modern omics technologies to real-world problems in the life sciences. Filling a gap in the literature, it offers a broad, multidisciplinary view of current and emerging applications of omics in a single volume. Written by highly experienced active researchers, each chapter describes a particular area of omics and the associated technologies and applications. Topics covered include: Proteomics, epigenomics, and pharmacogenomics Toxicogenomics and the assessment of environmental pollutants Applications of plant metabolomics Nutrigenomics and its therapeutic applications Microalgal omics and omics approaches in biofuel production Next-generation sequencing and omics technology for transgenic plant analysis Omics approaches in crop improvement Engineering dark-operative chlorophyll synthesis Computational regulomics Omics techniques for the analysis of RNA splicing New fields, including metagenomics, glycomics, and miRNA Breast cancer biomarkers for early detection Environomics strategies for environmental sustainability This timely book explores a wide range of omics application areas in the biomedical, agricultural, and environmental sciences. Throughout, it highlights working solutions as well as open problems and future challenges. Demonstrating the diversity of omics, it introduces readers to state-of-the-art developments and trends in omics-driven research.

Using Genomics, Metagenomics and Other "Omics" to Assess Valuable Microbial Ecosystem Services and Novel Biotechnological Applications

Diana Elizabeth Marco,Florence Abram
Using Genomics Metagenomics and Other Omics to Assess Valuable Microbial Ecosystem Services and Novel Biotechnological Applications Book PDF

Author : Diana Elizabeth Marco,Florence Abram
Publisher : Frontiers Media SA
Page : 674 pages
File Size : 41,7 Mb
Release : 2019-05-15
Category : Electronic
ISBN : 9782889458141

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Using Genomics, Metagenomics and Other "Omics" to Assess Valuable Microbial Ecosystem Services and Novel Biotechnological Applications by Diana Elizabeth Marco,Florence Abram Pdf

Most ecosystem services and goods human populations use and consume are provided by microbial populations and communities. Indeed, numerous provisioning services (e.g. food and enzymes for industrial processes), regulating services (e.g. water quality, contamination alleviation and biological processes such as plant-microbial symbioses), and supporting services (e.g. nutrient cycling, agricultural production and biodiversity) are mediated by microbes. The fast development of metagenomics and other meta-omics technologies is expanding our understanding of microbial diversity, ecology, evolution and functioning. This enhanced knowledge directly translates into the emergence of new applications in an unlimited variety of areas across all microbial ecosystem services and goods. The varied topics addressed in this Research Topic include the development of innovative industrial processes, the discovery of novel natural products, the advancement of new agricultural methods, the amelioration of negative effects of productive or natural microbiological processes, as well as food security and human health, and archeological conservation. The articles compiled provide an updated, high-quality overview of current work in the field. This body of research makes a valuable contribution to the understanding of microbial ecosystem services, and expands the horizon for finding and developing new and more efficient biotechnological applications.

Environmental Microbiology for Engineers, Second Edition

Volodymyr Ivanov
Environmental Microbiology for Engineers Second Edition Book PDF

Author : Volodymyr Ivanov
Publisher : CRC Press
Page : 0 pages
File Size : 47,6 Mb
Release : 2015-11-30
Category : Science
ISBN : 1498702120

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Environmental Microbiology for Engineers, Second Edition by Volodymyr Ivanov Pdf

This book enables engineering students to understand how microbiology can be applied to environmental research and practical applications. Written specifically for senior undergraduate to graduate level civil and environmental engineering students, the textbook encompasses both fundamental and applied principles and covers topics such as the microbiology of water, wastewater, soil and air biotreatment systems used in environmental engineering. This new, updated edition adds three entirely new chapters (environmental bionanotechnology, microbial geotechnology and environmental engineering of closed microbial ecosystems).