Phylogenomic Discordance In Plant Systematics

Author : Stefan Wanke,Susann Wicke
Publisher : Frontiers Media SA
Page : 233 pages
File Size : 45,8 Mb
Release : 2023-11-15
Category : Science
ISBN : 9782832538999

Get Book

Phylogenomic Discordance in Plant Systematics by Stefan Wanke,Susann Wicke Pdf

Phylogenetics often uncovers contradicting hypotheses regarding the relationships within the same group of organisms, a phenomenon known since the beginning of the molecular systematics era. While, historically, single marker-based analyses produced discordance, nowadays entire cellular genomes or portions of the same genomic compartment conflict with others or the rest, respectively. In contrast to the beginning of the molecular systematics era, when adding markers and taxa offered a way out of systematic errors, genome inference-based incongruences cannot be addressed and explained easily. Disagreeing phylogenomic hypotheses might originate from various evolutionary processes, including but not limited to hybridization or incomplete lineage sorting, thereby leading to gene tree-versus species tree-associated discrepancies. Today, this can be expanded to genome discordance, where phylogenomic signals of organellar genomes (plastid, mitochondrial) and the nuclear genome disagree due to intrinsically different coalescent paths or phenomena like organelle capture.

Author : Walter S. Judd
Publisher : Sinauer Associates, Incorporated
Page : 636 pages
File Size : 48,6 Mb
Release : 2008
Category : Science
ISBN : UOM:39015070711919

Get Book

Plant Systematics by Walter S. Judd Pdf

A comprehensive introduction to vascular plant phylogeny, the third edition of "Plant Systematics" reflects changes in the circumscription of many orders and families to represent monophyletic groups, following the most recent classification of the Angiosperm Phylogeny Group. Molecular taxonomic methods are fully presented, as are the results of many recent studies, both molecular and morphological.

Author : Albert E. Radford
Publisher : HarperCollins Publishers
Page : 520 pages
File Size : 50,7 Mb
Release : 1986
Category : Science
ISBN : STANFORD:36105032317948

Get Book

Fundamentals of Plant Systematics by Albert E. Radford Pdf

Author : Peter M. Hollingsworth,Richard M. Bateman,Richard J. Gornall
Publisher : CRC Press
Page : 508 pages
File Size : 46,7 Mb
Release : 1999-08-19
Category : Science
ISBN : 1439833273

Get Book

Molecular Systematics and Plant Evolution by Peter M. Hollingsworth,Richard M. Bateman,Richard J. Gornall Pdf

Molecular Systematics and Plant Evolution discusses the diversity and evolution of plants with a molecular approach. It looks at population genetics, phylogeny (history of evolution) and developmental genetics, to provide a framework from which to understand evolutionary patterns and relationships amongst plants. The international panel of contributors are all respected systematists and evolutionary biologists, who have brought together a wide range of topics from the forefront of research while keeping the text accessible to students. It has been written for senior undergraduates, postgraduates and researchers in the fields of botany, systematics, population / conservation genetics, phylogenetics and evolutionary biology.

Author : Pamela Soltis,J.J. Doyle
Publisher : Springer Science & Business Media
Page : 586 pages
File Size : 41,8 Mb
Release : 2012-12-06
Category : Science
ISBN : 9781461554196

Get Book

Molecular Systematics of Plants II by Pamela Soltis,J.J. Doyle Pdf

In the five years since the publication of Molecular Systematics of Plants, the field of molecular systematics has advanced at an astonishing pace. This period has been marked by a volume of new empirical data and advances in theoretical and analytical issues related to DNA. Comparative DNA sequencing, facilitated by the amplification of DNA via the polymerase chain reaction (PCR), has become the tool of choice for molecular systematics. As a result, large portions of the Molecular Systematics of Plants have become outdated. Molecular Systematics of Plants II summarizes these recent achievements in plant molecular systematics. Like its predecessor, this completely revised work illustrates the potential of DNA markers for addressing a wide variety of phylogenetic and evolutionary questions. The volume provides guidance in choosing appropriate techniques, as well as appropriate genes for sequencing, for given levels of systematic inquiry. More than a review of techniques and previous work, Molecular Systematics of Plants II provides a stimulus for developing future research in this rapidly evolving field. Molecular Systematics of Plants II is not only written for systematists (faculty, graduate students, and researchers), but also for evolutionary biologists, botanists, and paleobotanists interested in reviewing current theory and practice in plant molecular systematics.

Author : Walter Stephen Judd,Christopher S. Campbell,Elizabeth Anne Kellogg,Peter Francis Stevens,Michael John Donoghue
Publisher : Unknown
Page : 0 pages
File Size : 42,7 Mb
Release : 2023
Category : Plants
ISBN : 0197764843

Get Book

Plant Systematics by Walter Stephen Judd,Christopher S. Campbell,Elizabeth Anne Kellogg,Peter Francis Stevens,Michael John Donoghue Pdf

Incorporating phylogenetic principles and methods throughout, this text moves from the careful explanation of phylogenetic methods and principles to the taxonomic survey of vascular plant families. It assumes no prerequisites other than introductory botany or biology.

Author : Tod F. Stuessy,Elvira Hörandl,Veronika Mayer,International Association for Plant Taxonomy
Publisher : Unknown
Page : 418 pages
File Size : 50,7 Mb
Release : 2001
Category : Botany
ISBN : UOM:39015056305991

Get Book

Plant Systematics by Tod F. Stuessy,Elvira Hörandl,Veronika Mayer,International Association for Plant Taxonomy Pdf

Author : Wenpan Dong,Lianming Gao,Peter Poczai,Chao Xu,Yu Song
Publisher : Frontiers Media SA
Page : 133 pages
File Size : 43,9 Mb
Release : 2023-06-23
Category : Science
ISBN : 9782832527245

Get Book

Rise to the challenges in plastome phylogenomics by Wenpan Dong,Lianming Gao,Peter Poczai,Chao Xu,Yu Song Pdf

Author : Daniel J. Crawford
Publisher : Wiley-Interscience
Page : 404 pages
File Size : 48,9 Mb
Release : 1990-04-24
Category : Science
ISBN : MINN:31951D000000253

Get Book

Plant Molecular Systematics by Daniel J. Crawford Pdf

Describes how the primary chemicals (protein, DNA) found in plants are used in determining plant taxonomic and evolutionary relationships--a growing area reflecting the application of molecular biologic techniques in macromolecular systematic research. Topics include seed protein electrophoresis, electrophoretic studies of Rubisco, enzyme electrophoresis, amino acid sequencing, and systematic serology. Emphasizes evaluation of the systematic potential of the various kinds of data made available by new technology. Includes case studies and discussion of trends and directions in molecular systematics.

Author : V. V. Sivarajan
Publisher : Cambridge University Press
Page : 312 pages
File Size : 54,6 Mb
Release : 1991-08-30
Category : Science
ISBN : 0521356792

Get Book

Introduction to the Principles of Plant Taxonomy by V. V. Sivarajan Pdf

A revised and fully updated edition encourages the reader to view existing classification systems objectively as it reflects upon the rapid advances that have occurred since the first edition's publication.

Author : Pamela Soltis,J.J. Doyle
Publisher : Springer
Page : 574 pages
File Size : 42,9 Mb
Release : 1998-06-30
Category : Science
ISBN : 0412111217

Get Book

Molecular Systematics of Plants II by Pamela Soltis,J.J. Doyle Pdf

In the five years since the publication of Molecular Systematics of Plants, the field of molecular systematics has advanced at an astonishing pace. This period has been marked by a volume of new empirical data and advances in theoretical and analytical issues related to DNA. Comparative DNA sequencing, facilitated by the amplification of DNA via the polymerase chain reaction (PCR), has become the tool of choice for molecular systematics. As a result, large portions of the Molecular Systematics of Plants have become outdated. Molecular Systematics of Plants II summarizes these recent achievements in plant molecular systematics. Like its predecessor, this completely revised work illustrates the potential of DNA markers for addressing a wide variety of phylogenetic and evolutionary questions. The volume provides guidance in choosing appropriate techniques, as well as appropriate genes for sequencing, for given levels of systematic inquiry. More than a review of techniques and previous work, Molecular Systematics of Plants II provides a stimulus for developing future research in this rapidly evolving field. Molecular Systematics of Plants II is not only written for systematists (faculty, graduate students, and researchers), but also for evolutionary biologists, botanists, and paleobotanists interested in reviewing current theory and practice in plant molecular systematics.

Author : Tod F. Stuessy,Daniel J. Crawford,Douglas E. Soltis,Pamela S. Soltis
Publisher : Unknown
Page : 425 pages
File Size : 44,8 Mb
Release : 2014
Category : Plants
ISBN : 3874294528

Get Book

Plant Systematics by Tod F. Stuessy,Daniel J. Crawford,Douglas E. Soltis,Pamela S. Soltis Pdf

Deals with biodiversity from evolution and interpretation of evolution as well as taxonomy. The relationships of Plant Systematics to Biodiversity is in the conclusion has an index to Taxa Index to subjects

Author : Michael G. Simpson
Publisher : Academic Press
Page : 776 pages
File Size : 51,5 Mb
Release : 2019-11-10
Category : Science
ISBN : 9780128126295

Get Book

Plant Systematics by Michael G. Simpson Pdf

Plant Systematics, Third Edition, has made substantial contributions to plant systematics courses at the upper-undergraduate and first year graduate level, with the first edition winning The New York Botanical Garden's Henry Allan Gleason Award for outstanding recent publication in plant taxonomy, plant ecology or plant geography. This third edition continues to provide the basis for teaching an introduction to the morphology, evolution and classification of land plants. A foundation of the approach, methods, research goals, evidence and terminology of plant systematics are presented, along with the most recent knowledge of evolutionary relationships of plants and practical information vital to the field. In this new edition, the author includes greatly expanded treatments on families of flowering plants, as well as tropical trees (all with full-color plates), and an updated explanation of maximum likelihood and Bayesian inference algorithms. Chapters on morphology and plant nomenclature have also been enhanced with new material. Covers research developments in plant molecular biology Features clear, detailed cladograms, drawings and photos Includes major revisions to chapters on phylogenetic systematics and plant morphology

Author : E. O. Wiley,Bruce S. Lieberman
Publisher : John Wiley & Sons
Page : 444 pages
File Size : 51,6 Mb
Release : 2011-06-07
Category : Science
ISBN : 9780470905968

Get Book

Phylogenetics by E. O. Wiley,Bruce S. Lieberman Pdf

The long-awaited revision of the industry standard on phylogenetics Since the publication of the first edition of this landmark volume more than twenty-five years ago, phylogenetic systematics has taken its place as the dominant paradigm of systematic biology. It has profoundly influenced the way scientists study evolution, and has seen many theoretical and technical advances as the field has continued to grow. It goes almost without saying that the next twenty-five years of phylogenetic research will prove as fascinating as the first, with many exciting developments yet to come. This new edition of Phylogenetics captures the very essence of this rapidly evolving discipline. Written for the practicing systematist and phylogeneticist, it addresses both the philosophical and technical issues of the field, as well as surveys general practices in taxonomy. Major sections of the book deal with the nature of species and higher taxa, homology and characters, trees and tree graphs, and biogeography—the purpose being to develop biologically relevant species, character, tree, and biogeographic concepts that can be applied fruitfully to phylogenetics. The book then turns its focus to phylogenetic trees, including an in-depth guide to tree-building algorithms. Additional coverage includes: Parsimony and parsimony analysis Parametric phylogenetics including maximum likelihood and Bayesian approaches Phylogenetic classification Critiques of evolutionary taxonomy, phenetics, and transformed cladistics Specimen selection, field collecting, and curating Systematic publication and the rules of nomenclature Providing a thorough synthesis of the field, this important update to Phylogenetics is essential for students and researchers in the areas of evolutionary biology, molecular evolution, genetics and evolutionary genetics, paleontology, physical anthropology, and zoology.

Author : Jim Leebens-Mack,Gerald Matthias Schneeweiss
Publisher : Frontiers Media SA
Page : 207 pages
File Size : 42,5 Mb
Release : 2022-08-09
Category : Science
ISBN : 9782889767502

Get Book

Insights in Plant Systematics and Evolution: 2021 by Jim Leebens-Mack,Gerald Matthias Schneeweiss Pdf