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R Primer, Second Edition by Claus Thorn Ekstrom Pdf
Newcomers to R are often intimidated by the command-line interface, the vast number of functions and packages, or the processes of importing data and performing a simple statistical analysis. The R Primer provides a collection of concise examples and solutions to R problems frequently encountered by new users of this statistical software. This new edition adds coverage of R Studio and reproducible research.
Newcomers to R are often intimidated by the command-line interface, the vast number of functions and packages, or the processes of importing data and performing a simple statistical analysis. The R Primer provides a collection of concise examples and solutions to R problems frequently encountered by new users of this statistical software.Rather tha
A Primer of Ecology with R by M. Henry Stevens Pdf
Provides simple explanations of the important concepts in population and community ecology. Provides R code throughout, to illustrate model development and analysis, as well as appendix introducing the R language. Interweaves ecological content and code so that either stands alone. Supplemental web site for additional code.
"Newcomers to R are often intimidated by the command-line interface, the vast number of functions and packages, or the processes of importing data and performing a simple statistical analysis. The R Primer provides a collection of concise examples and solutions to R problems frequently encountered by new users of this statistical software. This new edition adds coverage of R Studio and reproducible research."--Provided by publisher.
Praise for the first edition: "This book provides a good introduction to R, using a clear layout and detailed, reproducible examples. An ideal tool for any new R user. A wide range of topics are covered, making the book suitable for a variety of readers, from undergraduate students to professionals new to R an extremely helpful introduction to a very useful statistical package." -Claire Keeble, Journal of Applied Statistics, 2012 The R Primer provides a collection of concise examples with solutions and interpretations of R problems frequently encountered by new users of this statistical software. Maintaining all the material from the first edition and adding substantial new material, the 2nd edition of The R Primer contains numerous examples that illustrate a specific situation, topic, or problem, including data importing, data management, classical statistical analyses, and high-quality graphical production. Each example is self-contained and includes R code that can be run exactly as shown, enabling results from the book to be replicated. New to the Second Edition: Completely revised and updated with suggestions for using new and improved R packages Expanded with over 100 more pages New solutions for covering areas from web scraping over data wrangling to waffle plots and hanging rootograms. Additional intermediate and advanced topics in statistical data analysis including non-parametric statistics, random forests, penalized regression and curve smoothing. Claus Thorn Ekstrom is Professor at the Section of Biostatistics, University of Copenhagen where he teaches courses on statistics and R for beginners and advanced users. Professor Ekstrom s primary research interests lie within statistical genetics, genetic epidemiology, and bioinformatics, in particular genetic association studies, image analysis of microarray scans, and integrated analysis of gene expression and metabolic profile data. "
A Primer in Biological Data Analysis and Visualization Using R by Gregg Hartvigsen Pdf
R is the most widely used open-source statistical and programming environment for the analysis and visualization of biological data. Drawing on Gregg Hartvigsen's extensive experience teaching biostatistics and modeling biological systems, this text is an engaging, practical, and lab-oriented introduction to R for students in the life sciences. Underscoring the importance of R and RStudio in organizing, computing, and visualizing biological statistics and data, Hartvigsen guides readers through the processes of entering data into R, working with data in R, and using R to visualize data using histograms, boxplots, barplots, scatterplots, and other common graph types. He covers testing data for normality, defining and identifying outliers, and working with non-normal data. Students are introduced to common one- and two-sample tests as well as one- and two-way analysis of variance (ANOVA), correlation, and linear and nonlinear regression analyses. This volume also includes a section on advanced procedures and a chapter introducing algorithms and the art of programming using R.
C++ Primer Plus, Sixth Edition New C++11 Coverage C++ Primer Plus is a carefully crafted, complete tutorial on one of the most significant and widely used programming languages today. An accessible and easy-to-use self-study guide, this book is appropriate for both serious students of programming as well as developers already proficient in other languages. The sixth edition of C++ Primer Plus has been updated and expanded to cover the latest developments in C++, including a detailed look at the new C++11 standard. Author and educator Stephen Prata has created an introduction to C++ that is instructive, clear, and insightful. Fundamental programming concepts are explained along with details of the C++ language. Many short, practical examples illustrate just one or two concepts at a time, encouraging readers to master new topics by immediately putting them to use. Review questions and programming exercises at the end of each chapter help readers zero in on the most critical information and digest the most difficult concepts. In C++ Primer Plus, you’ll find depth, breadth, and a variety of teaching techniques and tools to enhance your learning: A new detailed chapter on the changes and additional capabilities introduced in the C++11 standard Complete, integrated discussion of both basic C language and additional C++ features Clear guidance about when and why to use a feature Hands-on learning with concise and simple examples that develop your understanding a concept or two at a time Hundreds of practical sample programs Review questions and programming exercises at the end of each chapter to test your understanding Coverage of generic C++ gives you the greatest possible flexibility Teaches the ISO standard, including discussions of templates, the Standard Template Library, the string class, exceptions, RTTI, and namespaces Table of Contents 1: Getting Started with C++ 2: Setting Out to C++ 3: Dealing with Data 4: Compound Types 5: Loops and Relational Expressions 6: Branching Statements and Logical Operators 7: Functions: C++’s Programming Modules 8: Adventures in Functions 9: Memory Models and Namespaces 10: Objects and Classes 11: Working with Classes 12: Classes and Dynamic Memory Allocation 13: Class Inheritance 14: Reusing Code in C++ 15: Friends, Exceptions, and More 16: The string Class and the Standard Template Library 17: Input, Output, and Files 18: The New C++11 Standard A Number Bases B C++ Reserved Words C The ASCII Character Set D Operator Precedence E Other Operators F The stringTemplate Class G The Standard Template Library Methods and Functions H Selected Readings and Internet Resources I Converting to ISO Standard C++ J Answers to Chapter Reviews
C++ Primer by Stanley B. Lippman,Josée Lajoie,Barbara E. Moo Pdf
Bestselling Programming Tutorial and Reference Completely Rewritten for the New C++11 Standard Fully updated and recast for the newly released C++11 standard, this authoritative and comprehensive introduction to C++ will help you to learn the language fast, and to use it in modern, highly effective ways. Highlighting today’s best practices, the authors show how to use both the core language and its standard library to write efficient, readable, and powerful code. C++ Primer, Fifth Edition, introduces the C++ standard library from the outset, drawing on its common functions and facilities to help you write useful programs without first having to master every language detail. The book’s many examples have been revised to use the new language features and demonstrate how to make the best use of them. This book is a proven tutorial for those new to C++, an authoritative discussion of core C++ concepts and techniques, and a valuable resource for experienced programmers, especially those eager to see C++11 enhancements illuminated. Start Fast and Achieve More Learn how to use the new C++11 language features and the standard library to build robust programs quickly, and get comfortable with high-level programming Learn through examples that illuminate today’s best coding styles and program design techniques Understand the “rationale behind the rules”: why C++11 works as it does Use the extensive crossreferences to help you connect related concepts and insights Benefit from up-to-date learning aids and exercises that emphasize key points, help you to avoid pitfalls, promote good practices, and reinforce what you’ve learned Access the source code for the extended examples from informit.com/title/0321714113 C++ Primer, Fifth Edition, features an enhanced, layflat binding, which allows the book to stay open more easily when placed on a flat surface. This special binding method—notable by a small space inside the spine—also increases durability.
R for Conservation and Development Projects by Nathan Whitmore Pdf
This book is aimed at conservation and development practitioners who need to learn and use R in a part-time professional context. It gives people with a non-technical background a set of skills to graph, map, and model in R. It also provides background on data integration in project management and covers fundamental statistical concepts. The book aims to demystify R and give practitioners the confidence to use it. Key Features: • Viewing data science as part of a greater knowledge and decision making system • Foundation sections on inference, evidence, and data integration • Plain English explanations of R functions • Relatable examples which are typical of activities undertaken by conservation and development organisations in the developing world • Worked examples showing how data analysis can be incorporated into project reports
Primer to Analysis of Genomic Data Using R by Cedric Gondro Pdf
Through this book, researchers and students will learn to use R for analysis of large-scale genomic data and how to create routines to automate analytical steps. The philosophy behind the book is to start with real world raw datasets and perform all the analytical steps needed to reach final results. Though theory plays an important role, this is a practical book for graduate and undergraduate courses in bioinformatics and genomic analysis or for use in lab sessions. How to handle and manage high-throughput genomic data, create automated workflows and speed up analyses in R is also taught. A wide range of R packages useful for working with genomic data are illustrated with practical examples. The key topics covered are association studies, genomic prediction, estimation of population genetic parameters and diversity, gene expression analysis, functional annotation of results using publically available databases and how to work efficiently in R with large genomic datasets. Important principles are demonstrated and illustrated through engaging examples which invite the reader to work with the provided datasets. Some methods that are discussed in this volume include: signatures of selection, population parameters (LD, FST, FIS, etc); use of a genomic relationship matrix for population diversity studies; use of SNP data for parentage testing; snpBLUP and gBLUP for genomic prediction. Step-by-step, all the R code required for a genome-wide association study is shown: starting from raw SNP data, how to build databases to handle and manage the data, quality control and filtering measures, association testing and evaluation of results, through to identification and functional annotation of candidate genes. Similarly, gene expression analyses are shown using microarray and RNAseq data. At a time when genomic data is decidedly big, the skills from this book are critical. In recent years R has become the de facto tool for analysis of gene expression data, in addition to its prominent role in analysis of genomic data. Benefits to using R include the integrated development environment for analysis, flexibility and control of the analytic workflow. Included topics are core components of advanced undergraduate and graduate classes in bioinformatics, genomics and statistical genetics. This book is also designed to be used by students in computer science and statistics who want to learn the practical aspects of genomic analysis without delving into algorithmic details. The datasets used throughout the book may be downloaded from the publisher’s website.
3D Math Primer for Graphics and Game Development, 2nd Edition by Fletcher Dunn,Ian Parberry Pdf
This engaging book presents the essential mathematics needed to describe, simulate, and render a 3D world. Reflecting both academic and in-the-trenches practical experience, the authors teach you how to describe objects and their positions, orientations, and trajectories in 3D using mathematics. The text provides an introduction to mathematics for game designers, including the fundamentals of coordinate spaces, vectors, and matrices. It also covers orientation in three dimensions, calculus and dynamics, graphics, and parametric curves.
Master linear regression techniques with a new edition of a classic text Reviews of the Second Edition: "I found it enjoyable reading and so full of interesting material that even the well-informed reader will probably find something new . . . a necessity for all of those who do linear regression." —Technometrics, February 1987 "Overall, I feel that the book is a valuable addition to the now considerable list of texts on applied linear regression. It should be a strong contender as the leading text for a first serious course in regression analysis." —American Scientist, May–June 1987 Applied Linear Regression, Third Edition has been thoroughly updated to help students master the theory and applications of linear regression modeling. Focusing on model building, assessing fit and reliability, and drawing conclusions, the text demonstrates how to develop estimation, confidence, and testing procedures primarily through the use of least squares regression. To facilitate quick learning, the Third Edition stresses the use of graphical methods in an effort to find appropriate models and to better understand them. In that spirit, most analyses and homework problems use graphs for the discovery of structure as well as for the summarization of results. The Third Edition incorporates new material reflecting the latest advances, including: Use of smoothers to summarize a scatterplot Box-Cox and graphical methods for selecting transformations Use of the delta method for inference about complex combinations of parameters Computationally intensive methods and simulation, including the bootstrap method Expanded chapters on nonlinear and logistic regression Completely revised chapters on multiple regression, diagnostics, and generalizations of regression Readers will also find helpful pedagogical tools and learning aids, including: More than 100 exercises, most based on interesting real-world data Web primers demonstrating how to use standard statistical packages, including R, S-Plus®, SPSS®, SAS®, and JMP®, to work all the examples and exercises in the text A free online library for R and S-Plus that makes the methods discussed in the book easy to use With its focus on graphical methods and analysis, coupled with many practical examples and exercises, this is an excellent textbook for upper-level undergraduates and graduate students, who will quickly learn how to use linear regression analysis techniques to solve and gain insight into real-life problems.
This book aims at meeting the growing demand in the field by introducing the basic spatial econometrics methodologies to a wide variety of researchers. It provides a practical guide that illustrates the potential of spatial econometric modelling, discusses problems and solutions and interprets empirical results.
A Mathematical Primer for Social Statistics by John Fox Pdf
A Mathematical Primer for Social Statistics, Second Edition presents mathematics central to learning and understanding statistical methods beyond the introductory level: the basic "language" of matrices and linear algebra and its visual representation, vector geometry; differential and integral calculus; probability theory; common probability distributions; statistical estimation and inference, including likelihood-based and Bayesian methods. The volume concludes by applying mathematical concepts and operations to a familiar case, linear least-squares regression. The Second Edition pays more attention to visualization, including the elliptical geometry of quadratic forms and its application to statistics. It also covers some new topics, such as an introduction to Markov-Chain Monte Carlo methods, which are important in modern Bayesian statistics. A companion website includes materials that enable readers to use the R statistical computing environment to reproduce and explore computations and visualizations presented in the text. The book is an excellent companion to a "math camp" or a course designed to provide foundational mathematics needed to understand relatively advanced statistical methods.
A Primer of Real Analytic Functions by KRANTZ,PARKS Pdf
The subject of real analytic functions is one of the oldest in mathe matical analysis. Today it is encountered early in ones mathematical training: the first taste usually comes in calculus. While most work ing mathematicians use real analytic functions from time to time in their work, the vast lore of real analytic functions remains obscure and buried in the literature. It is remarkable that the most accessible treatment of Puiseux's theorem is in Lefschetz's quite old Algebraic Geometry, that the clearest discussion of resolution of singularities for real analytic manifolds is in a book review by Michael Atiyah, that there is no comprehensive discussion in print of the embedding prob lem for real analytic manifolds. We have had occasion in our collaborative research to become ac quainted with both the history and the scope of the theory of real analytic functions. It seems both appropriate and timely for us to gather together this information in a single volume. The material presented here is of three kinds. The elementary topics, covered in Chapter 1, are presented in great detail. Even results like a real ana lytic inverse function theorem are difficult to find in the literature, and we take pains here to present such topics carefully. Topics of middling difficulty, such as separate real analyticity, Puiseux series, the FBI transform, and related ideas (Chapters 2-4), are covered thoroughly but rather more briskly.
