Bayesian Ideas And Data Analysis

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Bayesian Ideas and Data Analysis

Author : Ronald Christensen,Wesley Johnson,Adam Branscum,Timothy E Hanson
Publisher : CRC Press
Page : 518 pages
File Size : 45,6 Mb
Release : 2011-07-07
Category : Mathematics
ISBN : 9781439803554

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Bayesian Ideas and Data Analysis by Ronald Christensen,Wesley Johnson,Adam Branscum,Timothy E Hanson Pdf

Emphasizing the use of WinBUGS and R to analyze real data, Bayesian Ideas and Data Analysis: An Introduction for Scientists and Statisticians presents statistical tools to address scientific questions. It highlights foundational issues in statistics, the importance of making accurate predictions, and the need for scientists and statisticians to collaborate in analyzing data. The WinBUGS code provided offers a convenient platform to model and analyze a wide range of data. The first five chapters of the book contain core material that spans basic Bayesian ideas, calculations, and inference, including modeling one and two sample data from traditional sampling models. The text then covers Monte Carlo methods, such as Markov chain Monte Carlo (MCMC) simulation. After discussing linear structures in regression, it presents binomial regression, normal regression, analysis of variance, and Poisson regression, before extending these methods to handle correlated data. The authors also examine survival analysis and binary diagnostic testing. A complementary chapter on diagnostic testing for continuous outcomes is available on the book’s website. The last chapter on nonparametric inference explores density estimation and flexible regression modeling of mean functions. The appropriate statistical analysis of data involves a collaborative effort between scientists and statisticians. Exemplifying this approach, Bayesian Ideas and Data Analysis focuses on the necessary tools and concepts for modeling and analyzing scientific data. Data sets and codes are provided on a supplemental website.

Bayesian Data Analysis, Third Edition

Author : Andrew Gelman,John B. Carlin,Hal S. Stern,David B. Dunson,Aki Vehtari,Donald B. Rubin
Publisher : CRC Press
Page : 677 pages
File Size : 40,8 Mb
Release : 2013-11-01
Category : Mathematics
ISBN : 9781439840955

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Bayesian Data Analysis, Third Edition by Andrew Gelman,John B. Carlin,Hal S. Stern,David B. Dunson,Aki Vehtari,Donald B. Rubin Pdf

Now in its third edition, this classic book is widely considered the leading text on Bayesian methods, lauded for its accessible, practical approach to analyzing data and solving research problems. Bayesian Data Analysis, Third Edition continues to take an applied approach to analysis using up-to-date Bayesian methods. The authors—all leaders in the statistics community—introduce basic concepts from a data-analytic perspective before presenting advanced methods. Throughout the text, numerous worked examples drawn from real applications and research emphasize the use of Bayesian inference in practice. New to the Third Edition Four new chapters on nonparametric modeling Coverage of weakly informative priors and boundary-avoiding priors Updated discussion of cross-validation and predictive information criteria Improved convergence monitoring and effective sample size calculations for iterative simulation Presentations of Hamiltonian Monte Carlo, variational Bayes, and expectation propagation New and revised software code The book can be used in three different ways. For undergraduate students, it introduces Bayesian inference starting from first principles. For graduate students, the text presents effective current approaches to Bayesian modeling and computation in statistics and related fields. For researchers, it provides an assortment of Bayesian methods in applied statistics. Additional materials, including data sets used in the examples, solutions to selected exercises, and software instructions, are available on the book’s web page.

Bayesian Data Analysis, Second Edition

Author : Andrew Gelman,John B. Carlin,Hal S. Stern,Donald B. Rubin
Publisher : CRC Press
Page : 717 pages
File Size : 47,9 Mb
Release : 2003-07-29
Category : Mathematics
ISBN : 9781420057294

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Bayesian Data Analysis, Second Edition by Andrew Gelman,John B. Carlin,Hal S. Stern,Donald B. Rubin Pdf

Incorporating new and updated information, this second edition of THE bestselling text in Bayesian data analysis continues to emphasize practice over theory, describing how to conceptualize, perform, and critique statistical analyses from a Bayesian perspective. Its world-class authors provide guidance on all aspects of Bayesian data analysis and include examples of real statistical analyses, based on their own research, that demonstrate how to solve complicated problems. Changes in the new edition include: Stronger focus on MCMC Revision of the computational advice in Part III New chapters on nonlinear models and decision analysis Several additional applied examples from the authors' recent research Additional chapters on current models for Bayesian data analysis such as nonlinear models, generalized linear mixed models, and more Reorganization of chapters 6 and 7 on model checking and data collection Bayesian computation is currently at a stage where there are many reasonable ways to compute any given posterior distribution. However, the best approach is not always clear ahead of time. Reflecting this, the new edition offers a more pluralistic presentation, giving advice on performing computations from many perspectives while making clear the importance of being aware that there are different ways to implement any given iterative simulation computation. The new approach, additional examples, and updated information make Bayesian Data Analysis an excellent introductory text and a reference that working scientists will use throughout their professional life.

Bayesian Methods for Statistical Analysis

Author : Borek Puza
Publisher : ANU Press
Page : 698 pages
File Size : 53,5 Mb
Release : 2015-10-01
Category : Mathematics
ISBN : 9781921934261

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Bayesian Methods for Statistical Analysis by Borek Puza Pdf

Bayesian Methods for Statistical Analysis is a book on statistical methods for analysing a wide variety of data. The book consists of 12 chapters, starting with basic concepts and covering numerous topics, including Bayesian estimation, decision theory, prediction, hypothesis testing, hierarchical models, Markov chain Monte Carlo methods, finite population inference, biased sampling and nonignorable nonresponse. The book contains many exercises, all with worked solutions, including complete computer code. It is suitable for self-study or a semester-long course, with three hours of lectures and one tutorial per week for 13 weeks.

Data Analysis

Author : Devinderjit Sivia,John Skilling
Publisher : OUP Oxford
Page : 264 pages
File Size : 42,9 Mb
Release : 2006-06-02
Category : Mathematics
ISBN : 9780191546709

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Data Analysis by Devinderjit Sivia,John Skilling Pdf

One of the strengths of this book is the author's ability to motivate the use of Bayesian methods through simple yet effective examples. - Katie St. Clair MAA Reviews.

Doing Bayesian Data Analysis

Author : John Kruschke
Publisher : Academic Press
Page : 776 pages
File Size : 53,9 Mb
Release : 2014-11-11
Category : Mathematics
ISBN : 9780124059160

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Doing Bayesian Data Analysis by John Kruschke Pdf

Doing Bayesian Data Analysis: A Tutorial with R, JAGS, and Stan, Second Edition provides an accessible approach for conducting Bayesian data analysis, as material is explained clearly with concrete examples. Included are step-by-step instructions on how to carry out Bayesian data analyses in the popular and free software R and WinBugs, as well as new programs in JAGS and Stan. The new programs are designed to be much easier to use than the scripts in the first edition. In particular, there are now compact high-level scripts that make it easy to run the programs on your own data sets. The book is divided into three parts and begins with the basics: models, probability, Bayes’ rule, and the R programming language. The discussion then moves to the fundamentals applied to inferring a binomial probability, before concluding with chapters on the generalized linear model. Topics include metric-predicted variable on one or two groups; metric-predicted variable with one metric predictor; metric-predicted variable with multiple metric predictors; metric-predicted variable with one nominal predictor; and metric-predicted variable with multiple nominal predictors. The exercises found in the text have explicit purposes and guidelines for accomplishment. This book is intended for first-year graduate students or advanced undergraduates in statistics, data analysis, psychology, cognitive science, social sciences, clinical sciences, and consumer sciences in business. Accessible, including the basics of essential concepts of probability and random sampling Examples with R programming language and JAGS software Comprehensive coverage of all scenarios addressed by non-Bayesian textbooks: t-tests, analysis of variance (ANOVA) and comparisons in ANOVA, multiple regression, and chi-square (contingency table analysis) Coverage of experiment planning R and JAGS computer programming code on website Exercises have explicit purposes and guidelines for accomplishment Provides step-by-step instructions on how to conduct Bayesian data analyses in the popular and free software R and WinBugs

Bayesian Analysis for Population Ecology

Author : Ruth King,Byron Morgan,Olivier Gimenez,Steve Brooks
Publisher : CRC Press
Page : 457 pages
File Size : 47,9 Mb
Release : 2009-10-30
Category : Mathematics
ISBN : 9781439811887

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Bayesian Analysis for Population Ecology by Ruth King,Byron Morgan,Olivier Gimenez,Steve Brooks Pdf

Novel Statistical Tools for Conserving and Managing PopulationsBy gathering information on key demographic parameters, scientists can often predict how populations will develop in the future and relate these parameters to external influences, such as global warming. Because of their ability to easily incorporate random effects, fit state-space mode

Doing Bayesian Data Analysis

Author : John Kruschke
Publisher : Academic Press
Page : 673 pages
File Size : 54,6 Mb
Release : 2010-11-25
Category : Mathematics
ISBN : 9780123814869

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Doing Bayesian Data Analysis by John Kruschke Pdf

There is an explosion of interest in Bayesian statistics, primarily because recently created computational methods have finally made Bayesian analysis tractable and accessible to a wide audience. Doing Bayesian Data Analysis, A Tutorial Introduction with R and BUGS, is for first year graduate students or advanced undergraduates and provides an accessible approach, as all mathematics is explained intuitively and with concrete examples. It assumes only algebra and ‘rusty’ calculus. Unlike other textbooks, this book begins with the basics, including essential concepts of probability and random sampling. The book gradually climbs all the way to advanced hierarchical modeling methods for realistic data. The text provides complete examples with the R programming language and BUGS software (both freeware), and begins with basic programming examples, working up gradually to complete programs for complex analyses and presentation graphics. These templates can be easily adapted for a large variety of students and their own research needs.The textbook bridges the students from their undergraduate training into modern Bayesian methods. Accessible, including the basics of essential concepts of probability and random sampling Examples with R programming language and BUGS software Comprehensive coverage of all scenarios addressed by non-bayesian textbooks- t-tests, analysis of variance (ANOVA) and comparisons in ANOVA, multiple regression, and chi-square (contingency table analysis). Coverage of experiment planning R and BUGS computer programming code on website Exercises have explicit purposes and guidelines for accomplishment

Bayesian Statistics the Fun Way

Author : Will Kurt
Publisher : No Starch Press
Page : 258 pages
File Size : 47,7 Mb
Release : 2019-07-09
Category : Mathematics
ISBN : 9781593279561

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Bayesian Statistics the Fun Way by Will Kurt Pdf

Fun guide to learning Bayesian statistics and probability through unusual and illustrative examples. Probability and statistics are increasingly important in a huge range of professions. But many people use data in ways they don't even understand, meaning they aren't getting the most from it. Bayesian Statistics the Fun Way will change that. This book will give you a complete understanding of Bayesian statistics through simple explanations and un-boring examples. Find out the probability of UFOs landing in your garden, how likely Han Solo is to survive a flight through an asteroid shower, how to win an argument about conspiracy theories, and whether a burglary really was a burglary, to name a few examples. By using these off-the-beaten-track examples, the author actually makes learning statistics fun. And you'll learn real skills, like how to: - How to measure your own level of uncertainty in a conclusion or belief - Calculate Bayes theorem and understand what it's useful for - Find the posterior, likelihood, and prior to check the accuracy of your conclusions - Calculate distributions to see the range of your data - Compare hypotheses and draw reliable conclusions from them Next time you find yourself with a sheaf of survey results and no idea what to do with them, turn to Bayesian Statistics the Fun Way to get the most value from your data.

Bayes Rules!

Author : Alicia A. Johnson,Miles Q. Ott,Mine Dogucu
Publisher : CRC Press
Page : 606 pages
File Size : 44,9 Mb
Release : 2022-03-03
Category : Mathematics
ISBN : 9781000529562

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Bayes Rules! by Alicia A. Johnson,Miles Q. Ott,Mine Dogucu Pdf

Praise for Bayes Rules!: An Introduction to Applied Bayesian Modeling “A thoughtful and entertaining book, and a great way to get started with Bayesian analysis.” Andrew Gelman, Columbia University “The examples are modern, and even many frequentist intro books ignore important topics (like the great p-value debate) that the authors address. The focus on simulation for understanding is excellent.” Amy Herring, Duke University “I sincerely believe that a generation of students will cite this book as inspiration for their use of – and love for – Bayesian statistics. The narrative holds the reader’s attention and flows naturally – almost conversationally. Put simply, this is perhaps the most engaging introductory statistics textbook I have ever read. [It] is a natural choice for an introductory undergraduate course in applied Bayesian statistics." Yue Jiang, Duke University “This is by far the best book I’ve seen on how to (and how to teach students to) do Bayesian modeling and understand the underlying mathematics and computation. The authors build intuition and scaffold ideas expertly, using interesting real case studies, insightful graphics, and clear explanations. The scope of this book is vast – from basic building blocks to hierarchical modeling, but the authors’ thoughtful organization allows the reader to navigate this journey smoothly. And impressively, by the end of the book, one can run sophisticated Bayesian models and actually understand the whys, whats, and hows.” Paul Roback, St. Olaf College “The authors provide a compelling, integrated, accessible, and non-religious introduction to statistical modeling using a Bayesian approach. They outline a principled approach that features computational implementations and model assessment with ethical implications interwoven throughout. Students and instructors will find the conceptual and computational exercises to be fresh and engaging.” Nicholas Horton, Amherst College An engaging, sophisticated, and fun introduction to the field of Bayesian statistics, Bayes Rules!: An Introduction to Applied Bayesian Modeling brings the power of modern Bayesian thinking, modeling, and computing to a broad audience. In particular, the book is an ideal resource for advanced undergraduate statistics students and practitioners with comparable experience. Bayes Rules! empowers readers to weave Bayesian approaches into their everyday practice. Discussions and applications are data driven. A natural progression from fundamental to multivariable, hierarchical models emphasizes a practical and generalizable model building process. The evaluation of these Bayesian models reflects the fact that a data analysis does not exist in a vacuum. Features • Utilizes data-driven examples and exercises. • Emphasizes the iterative model building and evaluation process. • Surveys an interconnected range of multivariable regression and classification models. • Presents fundamental Markov chain Monte Carlo simulation. • Integrates R code, including RStan modeling tools and the bayesrules package. • Encourages readers to tap into their intuition and learn by doing. • Provides a friendly and inclusive introduction to technical Bayesian concepts. • Supports Bayesian applications with foundational Bayesian theory.

A First Course in Bayesian Statistical Methods

Author : Peter D. Hoff
Publisher : Springer Science & Business Media
Page : 271 pages
File Size : 47,6 Mb
Release : 2009-06-02
Category : Mathematics
ISBN : 9780387924076

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A First Course in Bayesian Statistical Methods by Peter D. Hoff Pdf

A self-contained introduction to probability, exchangeability and Bayes’ rule provides a theoretical understanding of the applied material. Numerous examples with R-code that can be run "as-is" allow the reader to perform the data analyses themselves. The development of Monte Carlo and Markov chain Monte Carlo methods in the context of data analysis examples provides motivation for these computational methods.

Missing Data in Longitudinal Studies

Author : Michael J. Daniels,Joseph W. Hogan
Publisher : CRC Press
Page : 328 pages
File Size : 40,5 Mb
Release : 2008-03-11
Category : Mathematics
ISBN : 1420011189

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Missing Data in Longitudinal Studies by Michael J. Daniels,Joseph W. Hogan Pdf

Drawing from the authors’ own work and from the most recent developments in the field, Missing Data in Longitudinal Studies: Strategies for Bayesian Modeling and Sensitivity Analysis describes a comprehensive Bayesian approach for drawing inference from incomplete data in longitudinal studies. To illustrate these methods, the authors employ several data sets throughout that cover a range of study designs, variable types, and missing data issues. The book first reviews modern approaches to formulate and interpret regression models for longitudinal data. It then discusses key ideas in Bayesian inference, including specifying prior distributions, computing posterior distribution, and assessing model fit. The book carefully describes the assumptions needed to make inferences about a full-data distribution from incompletely observed data. For settings with ignorable dropout, it emphasizes the importance of covariance models for inference about the mean while for nonignorable dropout, the book studies a variety of models in detail. It concludes with three case studies that highlight important features of the Bayesian approach for handling nonignorable missingness. With suggestions for further reading at the end of most chapters as well as many applications to the health sciences, this resource offers a unified Bayesian approach to handle missing data in longitudinal studies.

Bayesian Reasoning in Data Analysis

Author : Giulio D'Agostini
Publisher : World Scientific
Page : 352 pages
File Size : 48,8 Mb
Release : 2003-06-13
Category : Mathematics
ISBN : 9789814486095

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Bayesian Reasoning in Data Analysis by Giulio D'Agostini Pdf

This book provides a multi-level introduction to Bayesian reasoning (as opposed to “conventional statistics”) and its applications to data analysis. The basic ideas of this “new” approach to the quantification of uncertainty are presented using examples from research and everyday life. Applications covered include: parametric inference; combination of results; treatment of uncertainty due to systematic errors and background; comparison of hypotheses; unfolding of experimental distributions; upper/lower bounds in frontier-type measurements. Approximate methods for routine use are derived and are shown often to coincide — under well-defined assumptions! — with “standard” methods, which can therefore be seen as special cases of the more general Bayesian methods. In dealing with uncertainty in measurements, modern metrological ideas are utilized, including the ISO classification of uncertainty into type A and type B. These are shown to fit well into the Bayesian framework. Contents: Critical Review and Outline of the Bayesian Alternative:Uncertainty in Physics and the Usual Methods of Handling ItA Probabilistic Theory of Measurement UncertaintyA Bayesian Primer:Subjective Probability and Bayes' TheoremProbability Distributions (A Concise Reminder)Bayesian Inference of Continuous QuantitiesGaussian LikelihoodCounting ExperimentsBypassing Bayes' Theorem for Routine ApplicationsBayesian UnfoldingFurther Comments, Examples and Applications:Miscellanea on General Issues in Probability and InferenceCombination of Experimental Results: A Closer LookAsymmetric Uncertainties and Nonlinear PropagationWhich Priors for Frontier Physics?Conclusion:Conclusions and Bibliography Readership: Graduate students and researchers interested in probability and statistics and their applications in science, particularly the evaluation of uncertainty in measurements. Keywords:Probability;Bayesian Statistics;Error Theory;Measurement Uncertainty;MetrologyReviews:“… statistics textbooks must take seriously the need to teach the foundations of statistical reasoning from the beginning … D'Agostini's new book does this admirably, building an edifice of Bayesian statistical reasoning in the physical sciences on solid foundations.”Journal of the American Statistical Association

A Student’s Guide to Bayesian Statistics

Author : Ben Lambert
Publisher : SAGE
Page : 744 pages
File Size : 43,9 Mb
Release : 2018-04-20
Category : Social Science
ISBN : 9781526418265

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A Student’s Guide to Bayesian Statistics by Ben Lambert Pdf

Supported by a wealth of learning features, exercises, and visual elements as well as online video tutorials and interactive simulations, this book is the first student-focused introduction to Bayesian statistics. Without sacrificing technical integrity for the sake of simplicity, the author draws upon accessible, student-friendly language to provide approachable instruction perfectly aimed at statistics and Bayesian newcomers. Through a logical structure that introduces and builds upon key concepts in a gradual way and slowly acclimatizes students to using R and Stan software, the book covers: An introduction to probability and Bayesian inference Understanding Bayes′ rule Nuts and bolts of Bayesian analytic methods Computational Bayes and real-world Bayesian analysis Regression analysis and hierarchical methods This unique guide will help students develop the statistical confidence and skills to put the Bayesian formula into practice, from the basic concepts of statistical inference to complex applications of analyses.

Bayesian Statistics for the Social Sciences

Author : David Kaplan
Publisher : Guilford Publications
Page : 275 pages
File Size : 47,8 Mb
Release : 2023-10-02
Category : Social Science
ISBN : 9781462553556

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Bayesian Statistics for the Social Sciences by David Kaplan Pdf

The second edition of this practical book equips social science researchers to apply the latest Bayesian methodologies to their data analysis problems. It includes new chapters on model uncertainty, Bayesian variable selection and sparsity, and Bayesian workflow for statistical modeling. Clearly explaining frequentist and epistemic probability and prior distributions, the second edition emphasizes use of the open-source RStan software package. The text covers Hamiltonian Monte Carlo, Bayesian linear regression and generalized linear models, model evaluation and comparison, multilevel modeling, models for continuous and categorical latent variables, missing data, and more. Concepts are fully illustrated with worked-through examples from large-scale educational and social science databases, such as the Program for International Student Assessment and the Early Childhood Longitudinal Study. Annotated RStan code appears in screened boxes; the companion website (www.guilford.com/kaplan-materials) provides data sets and code for the book's examples. New to This Edition *Utilizes the R interface to Stan--faster and more stable than previously available Bayesian software--for most of the applications discussed. *Coverage of Hamiltonian MC; Cromwell’s rule; Jeffreys' prior; the LKJ prior for correlation matrices; model evaluation and model comparison, with a critique of the Bayesian information criterion; variational Bayes as an alternative to Markov chain Monte Carlo (MCMC) sampling; and other new topics. *Chapters on Bayesian variable selection and sparsity, model uncertainty and model averaging, and Bayesian workflow for statistical modeling.