Current Advances In Genomics And Gene Editing Tools For Crop Improvement In A Changing Climate Scenario

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Current advances in genomics and gene editing tools for crop improvement in a changing climate scenario

Author : Vijay Rani Rajpal,Deepmala Sehgal,Ravi Valluru,Sukhwinder Singh
Publisher : Frontiers Media SA
Page : 312 pages
File Size : 47,6 Mb
Release : 2023-07-10
Category : Science
ISBN : 9782832528112

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Current advances in genomics and gene editing tools for crop improvement in a changing climate scenario by Vijay Rani Rajpal,Deepmala Sehgal,Ravi Valluru,Sukhwinder Singh Pdf

Genome Editing

Author : Shabir Hussain Wani,Goetz Hensel
Publisher : Springer Nature
Page : 338 pages
File Size : 41,8 Mb
Release : 2022-11-08
Category : Science
ISBN : 9783031080722

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Genome Editing by Shabir Hussain Wani,Goetz Hensel Pdf

Over the last few decades, various techniques have been developed to alter the properties of plants and animals. While the targeted transfer of recombinant DNA into crop plants remains a valuable tool to achieve a desirable breeding outcome, integration of transgenes into the host genome has been random, which in part, leads to reduced acceptance of GMOs by the general population in some parts of the world. Likewise, methods of induced mutagenesis, such as TILLING, have the disadvantage that many mutations are induced per plant, which has to be removed again by expensive backcrossing. Advances in genome sequencing have provided more and more information on differences between susceptible and resistant varieties, which can now be directly targeted and modified using CRISPR/Cas9 technology. By selecting specific gRNAs occurrence of off-target modifications are comparatively low. ZFNs and TALENs- based approaches required re-engineering a new set of assembled polypeptides for every new target site for each experiment. The difficulty in cloning and protein engineering prevented these tools from being broadly adopted by the scientific community. Compared to these technologies, designing the CRISPR toolbox is much simpler and more flexible. CRISPR/Cas9 is versatile, less expensive and highly efficient. It has become the most widely used technology for genome editing in many organisms. Since its inception as a powerful genome-editing tool in late 2012, this breakthrough technology has completely changed how science is performed. The first few chapters in this book introduce the basic concept, design and implementation of CRISPR/Cas9 for different plant systems. They are followed by in-depth discussions on the legal and bio-safety issues accompanying commercialization and patenting of this emerging technology. Lastly, this book covers emerging areas of new tools and potential applications. We believe readers, novice and expert alike, will benefit from this all-in-one resource on genome editing for crop improvement. Chapter 17 is available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.

Molecular Plant Breeding and Genome Editing Tools for Crop Improvement

Author : Deka, Pradip Chandra
Publisher : IGI Global
Page : 489 pages
File Size : 42,9 Mb
Release : 2020-08-07
Category : Technology & Engineering
ISBN : 9781799843139

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Molecular Plant Breeding and Genome Editing Tools for Crop Improvement by Deka, Pradip Chandra Pdf

Plant breeders have used mutagenic agents to create variability for their use in crop improvement. However, application of mutagenic agents has its own drawbacks, such as non-specificity and random nature, simultaneous effect on large numbers of genes, and induction of chromosomal aberrations. To overcome these limitations, several genome editing systems have been developed with the aid of cutting-edge technology rooted in the expertise of several research fields. Molecular Plant Breeding and Genome Editing Tools for Crop Improvement is a pivotal reference source that provides an interdisciplinary approach to crop breeding through genetics. Featuring coverage of a broad range of topics including software, molecular markers, and plant variety identification, this book is ideally designed for agriculturalists, biologists, engineers, advocates, policymakers, researchers, academicians, and students.

Principles and Practices of OMICS and Genome Editing for Crop Improvement

Author : Channa S. Prakash,Sajid Fiaz,Shah Fahad
Publisher : Springer Nature
Page : 422 pages
File Size : 46,6 Mb
Release : 2022-07-18
Category : Science
ISBN : 9783030969257

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Principles and Practices of OMICS and Genome Editing for Crop Improvement by Channa S. Prakash,Sajid Fiaz,Shah Fahad Pdf

Global food security is increasingly challenging in light of population increase, the impact of climate change on crop production, and limited land available for agricultural expansion. Plant breeding and other agricultural technologies have contributed considerably for food and nutritional security over the last few decades. Genetic engineering approaches are powerful tools that we have at our disposal to overcome substantial obstacles in the way of efficiency and productivity of current agricultural practices. Genome engineering via CRISPR/Cas9, Cpf1, base editing and prime editing, and OMICs through genomics, transcriptomics, proteomics, phenomics, an metabolomics have helped to discover underlying mechanisms controlling traits of economic importance. Principle and Practices of OMICs and Genome Editing for Crop Improvement provides recent research from eminent scholars from around the world, from various geographical regions, with established expertise on genome editing and OMICs technologies. This book offers a wide range of information on OMICs techniques and their applications to develop biotic, abiotic and climate resilient crops, metabolomics and next generation sequencing for sustainable crop production, integration bioinformatics, and multi-omics for precision plant breeding. Other topics include application of genome editing technologies for food and nutritional security, speed breeding, hybrid seed production, resource use efficiency, epigenetic modifications, transgene free breeding, database and bioinformatics for genome editing, and regulations adopted by various countries around globe for genome edited crops. Both OMICs and genome editing are vigorously utilized by researchers for crop improvement programs; however, there is limited literature available in a single source. This book provides a valuable resource not only for students at undergraduate and postgraduate level but also for researchers, stakeholders, policy makers, and practitioners interested in the potential of genome editing and OMICs for crop improvement programs.

Crop Improvement

Author : Siti Nor Akmar Abdullah,Ho Chai-Ling,Carol Wagstaff
Publisher : Springer
Page : 388 pages
File Size : 53,6 Mb
Release : 2017-10-17
Category : Technology & Engineering
ISBN : 9783319650791

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Crop Improvement by Siti Nor Akmar Abdullah,Ho Chai-Ling,Carol Wagstaff Pdf

The book covers the latest development in the biosciences field covering key topics in crop improvement including ‘omic approaches to improving sustainable crop production, advancement in marker technology, strategies in genetic manipulation, crop quality and sustainability and plant microbe interaction detailing on proven technologies to address critical issue for agricultural sustainability which are beneficial for researchers and students. The book also includes aspects of preserving crops after harvest as this is a key factor in promoting sustainable crop quality in terms of addressing waste, choosing the appropriate packaging and moving crops through the food and industrial supply chain. An important strategy to overcome the challenges in providing food for the world population in a sustainable manner is through concerted efforts by crop scientists to embrace new technologies in increasing yield, quality and improving food safety while minimizing adverse environmental impact of the agricultural activities. Most of the proven molecular and genetic technologies in crop science have been tested and verified in model plants such as Arabidopsis and tomato. The technologies, when deployed on various plant species of importance for human nutrition and industrial applications, including cereals, vegetables, fruits, herbs, fibre and oil crops, face many challenges, not only due to their longer life cycle but many other physiological and environmental factors affecting yield and quality of plant products. Furthermore, major impacts on crop production due to catastrophic diseases and global climate change needs urgent and innovative solutions. Therefore a systematic approach, employing various leading-edge technologies that enable the functional elucidation of key pathway genes via ‘omics tools, genome wide association with desired phenotypes and development of cost effective and practicable molecular tools for selection, is vital. The International Conference on Crop Improvement was held to address these and other pressing issues. This volume summarizes the keynote presentations from the meeting and highlights addition discussions that are critical to crop improvement in a challenging time.

Advanced Crop Improvement, Volume 1

Author : Aamir Raina,Mohammad Rafiq Wani,Rafiul Amin Laskar,Nasya Tomlekova,Samiullah Khan
Publisher : Springer
Page : 0 pages
File Size : 50,5 Mb
Release : 2023-09-11
Category : Science
ISBN : 3031281454

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Advanced Crop Improvement, Volume 1 by Aamir Raina,Mohammad Rafiq Wani,Rafiul Amin Laskar,Nasya Tomlekova,Samiullah Khan Pdf

As per the reports of FAO, the human population will rise to 9 billion by the end of 2050 and 70% of more food must be produced over the next three decades to feed the additional population. The breeding approaches for crop improvement programs are dependent on the availability and accessibility of genetic variation, either spontaneous or induced by the mutagens. Plant breeders, agronomists, and geneticists are under constant pressure to expand food production by employing innovative breeding strategies to enhance yield, adaptability, nutrition, resistance to biotic and abiotic stresses. In conventional breeding approaches, introgression of genes in crop varieties is laborious and time-consuming. Nowadays, new innovative plant breeding techniques such as molecular breeding and plant biotechnology, supplement the traditional breeding approaches to achieve the desired goals of enhanced food production. With the advent of recent molecular tools like genomics, transgenics, molecular marker-assisted back-crossing, TILLING, Eco-TILLING, gene editing, CRISPR CAS, non-targeted protein abundant comparative proteomics, genome wide association studies have made possible mapping of important QTLs, insertion of transgenes, reduction of linkage drags, and manipulation of genome. In general, conventional and modern plant breeding approaches would be strategically ideal for developing new elite crop varieties to meet the feeding requirement of the increasing world population. This book highlights the latest progress in the field of plant breeding, and their applicability in crop improvement. The basic concept of this 2-volume work is to assess the use of modern breeding strategies in supplementing conventional breeding toward the development of elite crop varieties, for obtaining desired goals of food production.

OMICs-based Techniques for Global Food Security

Author : Sajid Fiaz,Channapatna S. Prakash
Publisher : John Wiley & Sons
Page : 324 pages
File Size : 55,8 Mb
Release : 2024-06-04
Category : Technology & Engineering
ISBN : 9781394209125

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OMICs-based Techniques for Global Food Security by Sajid Fiaz,Channapatna S. Prakash Pdf

Forward-thinking resource discussing how to integrate OMICs and novel genome editing technologies for sustainable crop production OMICS-based Techniques for Global Food Security provides an in-depth understanding of the mechanisms of OMICs techniques for crop improvement, details how OMICs techniques can contribute to identifying genes and traits with economic benefits, and explains how to develop crop plants with improved yield, quality, and resistance to stresses through genome editing technologies, providing evidence on the developments of climate resilient crops via applications of genome editing techniques throughout. The text covers the application of OMICs in crop plants, the integration of bioinformatics and multi-OMICs for precision breeding, de-novo domestication, CRISPR/Cas system for crop improvement, hybrid seed production, transgene free breeding, regulation for genome edit crops, bioinformatics and genome editing, and other topics related OMICs and genome editing. The text also includes a chapter on the global regulations for genome edited crops, and explains how these regulations influence novel plant breeding techniques in their adopted countries. Written by two highly qualified academics, OMICs-based Techniques for Global Food Security covers sample topics such as: Crops genome sequencing and their application for crop improvement, and functional characterization of cereals genome The role of OMICs based technologies in plant sciences and utilization of different multi-OMICs approaches for crop improvement Genomic database and genetic resource of cereals, speed breeding for rapid crop improvement, and evolution of genome editing technologies CRISPR system discovery, history, and future perspective, and CRISPR/Cas system for biotic and abiotic stress resistance in cereals Providing a collection of recent literature focusing on developments and applications of OMICs based technologies for crop improvement, OMICs-based Techniques for Global Food Security is an important read for plant breeders, molecular biologists, researchers, postdoctoral fellows, and students in disciplines for developing crops with high yield and nutritional potential.

Smart Plant Breeding for Field Crops in Post-genomics Era

Author : Devender Sharma,Saurabh Singh,Susheel K. Sharma,Rajender Singh
Publisher : Springer Nature
Page : 424 pages
File Size : 42,7 Mb
Release : 2023-04-28
Category : Science
ISBN : 9789811982187

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Smart Plant Breeding for Field Crops in Post-genomics Era by Devender Sharma,Saurabh Singh,Susheel K. Sharma,Rajender Singh Pdf

This book emphasizes on cutting-edge next-generation smart plant breeding approaches for maximizing the use of genomic resources generated by high-throughput genomics in the post-genomic era. Through this book the readers would learn about the recent development in the genomic approaches such as genotype by sequencing (GBS) for genomic analysis (SNPs, Single Nucleotide Polymorphism), whole-genome re-sequencing (WGRS) and RNAseq for transcriptomic analysis (DEGs, Differentially Expressed Genes). To maximize the genetic gains in the cereal/food crops, the book covers topics on transgenic breeding, genome editing, high-throughput phenotyping, reliable/precision phenotyping and genomic information-based analysis. In the era of climate change and the ever-increasing population, food security and nutritional security are the primary concern of plant breeders, growers, and policymakers to address the UN’s sustainable development goals. Chapters of this book cohere around these goals and covers techniques such as (QTL mapping, association studies, candidate gene identification), omics, RNAi [through micro RNA (miRNA), small interfering RNA (siRNA) and artificial micro RNA (amiRNA)]. It also covers other genomic techniques like antisense technology, genome editing (CRISPR/cas9, base editing) and epigenomics that assist the crop improvement programmes to fulfil the UNs sustainable development goals. It explores the influence of rapidly available sequencing data assisting in the next generation breeding programmes. This volume is a productive resource for the students, researchers, scientists, teachers, public and private sector stakeholders involved in the genetic enhancement of cereal crops.

Smart Breeding

Author : Kailash Chandra,Subhash Chand,Ravi Prakash Saini,Rohit Sharma
Publisher : CRC Press
Page : 489 pages
File Size : 54,8 Mb
Release : 2024-02-13
Category : Science
ISBN : 9781000825664

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Smart Breeding by Kailash Chandra,Subhash Chand,Ravi Prakash Saini,Rohit Sharma Pdf

This new volume focuses on novel breeding and biotechnological approaches for crop improvement, covering recent advances in molecular breeding and plant breeding, such as pre-breeding, reverse breeding, allele mining, next-generation sequencing, etc. The authors consider the important necessity and development of climate-resilient crops that can withstand hostility or adversities of climate without substantially compromising yield and discuss ways to mitigate plant stress. The recent developments in breeding and biotechnological approaches concerning crop improvement that are discussed in the book include molecular markers, their genesis, and their significant applications for crop improvement; QTL mapping, a modern breeding approach for mapping quantitative traits; pulse molecular breeding and genomics; and approaches for precise gene alterations in the genome of organisms by using genome editing. Other techniques include reverse breeding, a technique that allows breeders to develop parental lines directly from the heterozygous plant within a shorter time frame; pre-breeding approaches for biotic and abiotic stress management in crop plants; allele mining as a way to find existing variations in an organism’s gene pool by scanning the entire gene; marker-assisted selection, where molecular markers have played a significant role in accelerating breeding programs; and next-generation sequencing (NGS) platforms in crop improvement, where the authors summarize the technical know-how of each sequencing platform and its merits and demerits. The book introduces the design and importance of Mutmap and its variant in modern breeding, a novel gene mapping approaches that allows rapid identification of causal nucleotide changes of mutants by whole-genome resequencing. Examples and case studies of the various approaches are included as well, with several examples of marker-assisted selection of rice and maize crop and other agriculturally important crops. This informative volume will enhance readers’ knowledge about the recent developments in breeding and biotechnological approaches concerning crop improvement.

Genome Engineering for Crop Improvement

Author : Santosh Upadhyay
Publisher : John Wiley & Sons
Page : 416 pages
File Size : 47,6 Mb
Release : 2020-12-31
Category : Science
ISBN : 9781119672388

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Genome Engineering for Crop Improvement by Santosh Upadhyay Pdf

In recent years, significant advancements have been made in the management of nutritional deficiency using genome engineering—enriching the nutritional properties of agricultural and horticultural crop plants such as wheat, rice, potatoes, grapes, and bananas. To meet the demands of the rapidly growing world population, researchers are developing a range of new genome engineering tools and strategies, from increasing the nutraceuticals in cereals and fruits, to decreasing the anti-nutrients in crop plants to improve the bioavailability of minerals and vitamins. Genome Engineering for Crop Improvement provides an up-to-date view of the use of genome editing for crop bio-fortification, improved bioavailability of minerals and nutrients, and enhanced hypo-allergenicity and hypo-immunogenicity. This volume examines a diversity of important topics including mineral and nutrient localization, metabolic engineering of carotenoids and flavonoids, genome engineering of zero calorie potatoes and allergen-free grains, engineering for stress resistance in crop plants, and more. Helping readers deepen their knowledge of the application of genome engineering in crop improvement, this book: Presents genetic engineering methods for developing edible oil crops, mineral translocation in grains, increased flavonoids in tomatoes, and cereals with enriched iron bioavailability Describes current genome engineering methods and the distribution of nutritional and mineral composition in important crop plants Offers perspectives on emerging technologies and the future of genome engineering in agriculture Genome Engineering for Crop Improvement is an essential resource for academics, scientists, researchers, agriculturalists, and students of plant molecular biology, system biology, plant biotechnology, and functional genomics.

Genomics-Assisted Crop Improvement

Author : Rajeev K. Varshney,Roberto Tuberosa
Publisher : Springer Science & Business Media
Page : 517 pages
File Size : 43,6 Mb
Release : 2007-12-13
Category : Technology & Engineering
ISBN : 9781402062971

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Genomics-Assisted Crop Improvement by Rajeev K. Varshney,Roberto Tuberosa Pdf

This superb volume provides a critical assessment of genomics tools and approaches for crop breeding. Volume 1 presents the status and availability of genomic resources and platforms, and also devises strategies and approaches for effectively exploiting genomics research. Volume 2 goes into detail on a number of case studies of several important crop and plant species that summarize both the achievements and limitations of genomics research for crop improvement.

Targeted genome editing for crop improvement

Author : Kejian Wang,Shuangxia Jin,Maria Raffaella Ercolano
Publisher : Frontiers Media SA
Page : 248 pages
File Size : 51,8 Mb
Release : 2023-03-07
Category : Science
ISBN : 9782832516850

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Targeted genome editing for crop improvement by Kejian Wang,Shuangxia Jin,Maria Raffaella Ercolano Pdf

Advances and Applications of Cost-Effective, High-Throughput Genotyping Technologies for Sustainable Agriculture

Author : Nisha Singh,Sapna Langyan,Vandna Rai
Publisher : Frontiers Media SA
Page : 196 pages
File Size : 49,6 Mb
Release : 2023-12-28
Category : Science
ISBN : 9782832541869

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Advances and Applications of Cost-Effective, High-Throughput Genotyping Technologies for Sustainable Agriculture by Nisha Singh,Sapna Langyan,Vandna Rai Pdf

Recent advances in next-generation sequencing-driven mass production of genomic data and various other integrated techniques have considerably broadened and deepened our understanding of living organisms' molecular systems. Because complex quantitative traits are difficult to select due to low heritability, conventional plant breeding relies on phenotypic selection and breeder experience, it takes longer to develop a new, improved variety. For association studies to identify DNA markers linked to these complex traits, genotyping chip arrays allow genotyping of thousands of markers in a short amount of time. Plant breeding consistency and predictability have improved thanks to advances in genomics. NGS technologies bring new tools and concepts that can enhance the precision and efficiency of plant breeding such as cost-effective, high throughput genotyping technologies for sustainable agriculture. These genotyping technologies will be lowering the time and cost of developing high-quality food crops that are stress-resistant while still having a high nutritional value. This Research Topic focuses on recent advancements in NGS-related technologies, mainly the development of cost-effective high-throughput genotyping platforms with a wide range of bioinformatics tools, and possible translational multi-omics applications in crop breeding programs for sustainable agriculture.

Genome Editing Technologies for Crop Improvement

Author : Kaijun Zhao,Rukmini Mishra,Raj Kumar Joshi
Publisher : Springer Nature
Page : 447 pages
File Size : 47,7 Mb
Release : 2022-08-01
Category : Technology & Engineering
ISBN : 9789811906008

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Genome Editing Technologies for Crop Improvement by Kaijun Zhao,Rukmini Mishra,Raj Kumar Joshi Pdf

This book compiles the relevant information related to genome editing tools and their roles in crop improvement. The book contains a brief introduction about various genome editing tools and their application in major crops. It discusses the genome editing approaches and the strategies used for genome editing in different crops. Some of the chapters cover the detailed methodology of sgRNA design, vector construction and transformation in different crops followed by data analysis. A few chapters focus on the applications of genome editing tools towards crop improvement. This book will be of particular interest to plant biologists working in the field of genome editing and crop breeders. It will provide valuable information and useful material for our readers’ experimental work.

Genotyping by Sequencing for Crop Improvement

Author : Humira Sonah,Vinod Goyal,S. M. Shivaraj,Rupesh K. Deshmukh
Publisher : John Wiley & Sons
Page : 404 pages
File Size : 47,9 Mb
Release : 2022-03-29
Category : Science
ISBN : 9781119745679

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Genotyping by Sequencing for Crop Improvement by Humira Sonah,Vinod Goyal,S. M. Shivaraj,Rupesh K. Deshmukh Pdf

OGENOTYPING BY SEQUENCING FOR CROP IMPROVEMENT A thoroughly up-to-date exploration of genotyping-by-sequencing technologies and related methods in plant science In Genotyping by Sequencing for Crop Improvement, a team of distinguished researchers delivers an in-depth and current exploration of the latest advances in genotyping-by-sequencing (GBS) methods, the statistical approaches used to analyze GBS data, and its applications, including quantitative trait loci (QTL) mapping, genome-wide association studies (GWAS), and genomic selection (GS) in crop improvement. This edited volume includes insightful contributions on a variety of relevant topics, like advanced molecular markers, high-throughput genotyping platforms, whole genome resequencing, QTL mapping with advanced mapping populations, analytical pipelines for GBS analysis, and more. The distinguished contributors explore traditional and advanced markers used in plant genotyping in extensive detail, and advanced genotyping platforms that cater to unique research purposes are discussed, as is the whole-genome resequencing (WGR) methodology. The included chapters also examine the applications of these technologies in several different crop categories, including cereals, pulses, oilseeds, and commercial crops. Genotyping by Sequencing for Crop Improvement also offers: A thorough introduction to molecular marker techniques and recent advancements in the technology Comprehensive explorations of the genotyping of seeds while preserving their viability, as well as advances in genomic selection Practical discussions of opportunities and challenges relating to high throughput genotyping in polyploid crops In-depth examinations of recent advances and applications of GBS, GWAS, and GS in cereals, pulses, oilseeds, millets, and commercial crops Perfect for practicing plant scientists with an interest in genotyping-by-sequencing technology, Genotyping by Sequencing for Crop Improvement will also earn a place in the libraries of researchers and students seeking a one-stop reference on the foundational aspects of – and recent advances in – genotyping-by-sequencing, genome-wide association studies, and genomic selection.