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Genetics and Genomics of Forest Trees by Filippos A. (Phil) Aravanopoulos Pdf
Forest tree genetics and genomics are advancing at an accelerated rate, thanks to recent developments in high-throughput, next-generation sequencing capabilities, and novel biostatistical tools. Population and landscape genetics and genomics have seen the rise of new approaches implemented in large-scale studies that employ the use of genome-wide sampling. Such studies have started to discern the dynamics of neutral and adaptive variation in nature and the processes that underlie spatially explicit patterns of genetic and genomic variation in nature. The continuous development of genetic maps in forest trees and the expansion of QTL and association mapping approaches contribute to the unravelling of the genotype-phenotype relationship and lead to marker-assisted and genome-wide selection. However, major challenges lie ahead. Recent literature suggests that species demography and genetic diversity have been affected both by climatic oscillations and anthropogenically induced stresses in a way calls into question the possibility of future adaptation. Moreover, the pace of contemporary environmental change presents a great challenge to forest tree populations and their ability to adapt, taking into consideration their life history characteristics. Several questions emerge that include, but are not limited to, the interpretation of forest tree genome surveillance and their structural/functional properties, the adaptive and neutral processes that have shaped forest tree genomes, the analysis of phenotypic traits relevant to adaptation (especially adaptation under contemporary climate change), the link between epigenetics/epigenomics and phenotype/genotype, and the use of genetics/genomics as well as genetic monitoring to advance conservation priorities.
Genetics and Improvement of Forest Trees by Yuji Ide Pdf
Forest tree improvement has mainly been implemented to enhance the productivity of artificial forests. However, given the drastically changing global environment, improvement of various traits related to environmental adaptability is more essential than ever. This book focuses on genetic information, including trait heritability and the physiological mechanisms thereof, which facilitate tree improvement. Nineteen papers are included, reporting genetic approaches to improving various species, including conifers, broad-leaf trees, and bamboo. All of the papers in this book provide cutting-edge genetic information on tree genetics and suggest research directions for future tree improvement.
Forest Genomics and Biotechnology by Isabel Allona,Matias Kirst,Wout Boerjan,Steven Strauss,Ronald Sederoff Pdf
This Research Topic addresses research in genomics and biotechnology to improve the growth and quality of forest trees for wood, pulp, biorefineries and carbon capture. Forests are the world’s greatest repository of terrestrial biomass and biodiversity. Forests serve critical ecological services, supporting the preservation of fauna and flora, and water resources. Planted forests also offer a renewable source of timber, for pulp and paper production, and the biorefinery. Despite their fundamental role for society, thousands of hectares of forests are lost annually due to deforestation, pests, pathogens and urban development. As a consequence, there is an increasing need to develop trees that are more productive under lower inputs, while understanding how they adapt to the environment and respond to biotic and abiotic stress. Forest genomics and biotechnology, disciplines that study the genetic composition of trees and the methods required to modify them, began over a quarter of a century ago with the development of the first genetic maps and establishment of early methods of genetic transformation. Since then, genomics and biotechnology have impacted all research areas of forestry. Genome analyses of tree populations have uncovered genes involved in adaptation and response to biotic and abiotic stress. Genes that regulate growth and development have been identified, and in many cases their mechanisms of action have been described. Genetic transformation is now widely used to understand the roles of genes and to develop germplasm that is more suitable for commercial tree plantations. However, in contrast to many annual crops that have benefited from centuries of domestication and extensive genomic and biotechnology research, in forestry the field is still in its infancy. Thus, tremendous opportunities remain unexplored. This Research Topic aims to briefly summarize recent findings, to discuss long-term goals and to think ahead about future developments and how this can be applied to improve growth and quality of forest trees.
Molecular Genetics and Breeding of Forest Trees by Sandeep Kumar,Mattias Fladung Pdf
Scientists and researchers from top labs around the world share their expertise! This unique text integrates tree transgenesis, functional genomics, and structural genomics to present, for the first time, a unified approach to research on the molecular biology of forest trees. A distinguished panel of scientists, researchers, and educators from around the world have combined their efforts to present the most up-to-date information and make Molecular Genetics and Breeding of Forest Trees an important addition to your professional or teaching collection. Helpful tables and figures make important points easy to access and understand. To make it easier to find the specific information you’re looking for, Molecular Genetics and Breeding of Forest Trees is divided into four sections: Forest Tree Functional Genomics, Molecular Biology of Wood Formation, Forest Tree Transgenesis, and Genome Mapping in Forest Trees. Within these sections, you’ll find the most up-to-date information on: functional genomics EST databases proteomics in forest trees genomics of wood formation and in vitro systems for the study of wood formation genetic transformation of forest trees stable expression of foreign genes modification of flowering in forest trees genome mapping in forest trees microsatellite DNA markers in forest trees exploring the transcriptome of the ectomycorrhizal symbiosis in trees
Tropical Forest Genetics by Reiner Finkeldey,Hans Heinrich Hattemer Pdf
This book provides a solid scientific basis for researchers, practitioners and students interested in the application of genetic principles to tropical forest ecology and management. It presents a concise overview of genetic variation, evolutionary processes and the human impact on forest genetic resources in the tropics. In addition, modern tools to assess genetic diversity patterns and the dynamics of genetic structures are introduced to the non-specialist reader.
Molecular Genetics And Breeding Of Forest Trees Indian Reprint by Kumar S,Fladung M. Pdf
Forest tree functional genomics; Functional genomics in forest trees; Expressed sequence tag databases from forestry tree species; Proteomics for genetic and physiological studies in forest trees: application in maritime pine; Exploring the transcriptome of the ectomycorrhizal symbiosis; Molecular biology of wood formation; Genomics of wood formation; Molecular genetics of cellulose biosynthesis in trees; Tuning lignin metabolism through genetic engineering in trees; In vitro systems for the study of wood formation; Forest tree transgenesis; Genetic modification in conifer forestry: state of the art and future potential - a case study; Transgenic forest trees for insect resistance; Modification of flowering in forest trees; Stability of transgene expression in Aspen; Asexual production of marker-free transgenetic Aspen using MAT vector systems; Genome mapping in forest trees; High-density linkage maps in conifer species and their potential application; Microsatellites in forest tree species: characteristics, identifcation , and applicatons; Genome mapping in populus; Genetic mapping in Acacias.
Wild Crop Relatives: Genomic and Breeding Resources by Chittaranjan Kole Pdf
Wild crop relatives are now playing a significant part in the elucidation and improvement of the genomes of their cultivated counterparts. This work includes comprehensive examinations of the status, origin, distribution, morphology, cytology, genetic diversity and available genetic and genomic resources of numerous wild crop relatives, as well as of their evolution and phylogenetic relationship. Further topics include their role as model plants, genetic erosion and conservation efforts, and their domestication for the purposes of bioenergy, phytomedicines, nutraceuticals and phytoremediation. Wild Crop Relatives: Genomic and Breeding Resources comprises 10 volumes on Cereals, Millets and Grasses, Oilseeds, Legume Crops and Forages, Vegetables, Temperate Fruits, Tropical and Subtropical Fruits, Industrial Crops, Plantation and Ornamental Crops, and Forest Trees. It contains 125 chapters written by nearly 400 well-known authors from about 40 countries.
Population Genetics of Forest Trees by W.T. Adams,Steven H. Strauss,Donald L. Copes,A.R. Griffin Pdf
Tropical climates, which occur between 23°30'N and S latitude (Jacob 1988), encompass a wide variety of plant communities (Hartshorn 1983, 1988), many of which are diverse in their woody floras. Within this geographic region, temperature and the amount and seasonality of rainfall define habitat types (UNESCO 1978). The F AO has estimated that there 1 are about 19 million km of potentially forested area in the global tropics, of which 58% were estimated to still be in closed forest in the mid-1970s (Sommers 1976; UNESCO 1978). Of this potentially forested region, 42% is categorized as dry forest lifezone, 33% is tropical moist forest, and 25% is wet or rain forest (Lugo 1988). The species diversity of these tropical habitats is very high. Raven (1976, in Mooney 1988) estimated that 65% of the 250,000 or more plant species of the earth are found in tropical regions. Of this floristic assemblage, a large fraction are woody species. In the well-collected tropical moist forest of Barro Colorado Island, Panama, 39. 7% (481 of 1212 species) of the native phanerogams are woody, arborescent species (Croat 1978). Another 21. 9% are woody vines and lianas. Southeast Asian Dipterocarp forests may contain 120-200 species of trees per hectare (Whitmore 1984), and recent surveys in upper Amazonia re corded from 89 to 283 woody species ~ 10 cm dbh per hectare (Gentry 1988). Tropical communities thus represent a global woody flora of significant scope.
Forest Genetics by Timothy L. White,W. T. Adams,David B. Neale Pdf
This book, which contains 20 chapters, integrates the varied subdisciplines of genetics and their applications in gene conservation, tree improvement and biotechnology. Topics covered include: genetic variation in natural forests, the application of genetics in tree improvement and breeding programmes, and genomic sequences and molecular technologies. This book will be a valuable resource for students, scientists and professionals in the plant sciences, especially forest geneticists, tree breeders, forest managers and other natural resource specialists.
Tree Breeding: Principles and Strategies by G. Namkoong,H. C. Kang,J. S. Brouard Pdf
It has become apparent, during discussions with students and colleagues in forest genetics, that a universal concern is the achievement of diverse goals of forestry from fiber production in industrial as well as farm forests to conserving forest ecosystems. Although we generally have several breeding methods available and several species to breed, we seek to satisfy multiple-use goals on diverse sites by management techniques that at best can only partially control edaphic environmental variation. The dominant approach, which was agriculturally motivated, has involved inten sive effort with complicated breeding plans on single species for uniform adaptability and single-product plantations. However, this is obviously neither the only, nor necessarily the best, solution for the genetic management of tree species, and thus our intent in this volume is to develop ways to achieve multiple objectives in tree breeding. We include an array of breeding plans from simple iterated designs to sets of multiple populations capable of using gene actions for different traits in different environments for uncertain futures. The presentation is organized around the development of breeding from single-to multiple-option plans, from single to multiple traits, from single to mUltiple environ ments, and from single to multiple populations. However, it is not a complete "How To" book, and includes neither exercises nor instructions on data handling. It also does not include discussion of all modes of reproduction and inheritance encountered in plants.
THE STATE OF THE WORLD’s FOREST GENETIC RESOURCES by Food and Agriculture Organization of the United Nations Pdf
The publication was prepared based on information provided by 86 countries, outcomes from regional and subregional consultations and commissioned thematic studies. It includes: •an overview of definitions and concepts related to Forest Genetic Resources (FGR) and a review of their value; •a description of the main drivers of changes; •the presentation of key emerging technologies; •an analysis of the current status of FGR conservation, use and related developments; •recommendations addressing the challenges and needs. By the FAO Commission on Genetic Resources for Food and Agriculture.
Comparative and Evolutionary Genomics of Angiosperm Trees by Andrew Groover,Quentin Cronk Pdf
Marking the change in focus of tree genomics from single species to comparative approaches, this book covers biological, genomic, and evolutionary aspects of angiosperm trees that provide information and perspectives to support researchers broadening the focus of their research. The diversity of angiosperm trees in morphology, anatomy, physiology and biochemistry has been described and cataloged by various scientific disciplines, but the molecular, genetic, and evolutionary mechanisms underlying this diversity have only recently been explored. Excitingly, advances in genomic and sequencing technologies are ushering a new era of research broadly termed comparative genomics, which simultaneously exploits and describes the evolutionary origins and genetic regulation of traits of interest. Within tree genomics, this research is already underway, as the number of complete genome sequences available for angiosperm trees is increasing at an impressive pace and the number of species for which RNAseq data are available is rapidly expanding. Because they are extensively covered by other literature and are rapidly changing, technical and computational approaches—such as the latest sequencing technologies—are not a main focus of this book. Instead, this comprehensive volume provides a valuable, broader view of tree genomics whose relevance will outlive the particulars of current-day technical approaches. The first section of the book discusses background on the evolution and diversification of angiosperm trees, as well as offers description of the salient features and diversity of the unique physiology and wood anatomy of angiosperm trees. The second section explores the two most advanced model angiosperm tree species (poplars and eucalypts) as well as species that are soon to emerge as new models. The third section describes the structural features and evolutionary histories of angiosperm tree genomes, followed by a fourth section focusing on the genomics of traits of biological, ecological, and economic interest. In summary, this book is a timely and well-referenced foundational resource for the forest tree community looking to embrace comparative approaches for the study of angiosperm trees.
Forest Genetics and Sustainability by Csaba Mátyás Pdf
During the 4th International Consultation on Forest Genetics and Tree Building, held in 1998 in Beijing, China, leading scientists were invited to review past achievements, to redefine the role of forest genetics and breeding in contemporary forestry, and to set priorities for future research and development. On the basis of the invited presentations, the volume summarizes the state of knowledge in various fields, such as the impact of forest management and of changing environmental conditions on genetic resources, and the value of genetic markers as indicators for adaptational potential, as well as the tasks of conservation. Detailed reports from the different continents provide a comprehensive diagnosis of the global situation of forest genetics and tree breeding research. The book offers not only an overview of contemporary trends and expected future developments, but also identifies current main problems in funding and cooperation. It may prove therefore useful not only for scientists, university lecturers and advanced students in the field of forestry, ecology and conservation biology, but also for decision makers and managers in companies and conservation organizations.
Genetics, Genomics and Breeding of Conifers by Christophe Plomion,Jean Bousquet,Chittaranjan Kole Pdf
With contributions by internationally reputed researchers in the field, this book presents the implications of the genomic revolution for conifers—promoting a better understanding of the evolution of these organisms as well as new knowledge about the molecular basis of quantitative trait variation. Both of these discoveries play important roles in their domestication. Topics include cytogenetics, patterns of nucleotide diversity, genetic mapping, integration of molecular markers in breeding, transcriptomics, advances in proteomics and metabolomics in gymnosperms, and economic importance.