Molecular Ecology And Evolution The Organismal Side

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Molecular Ecology and Evolution

Author : John C. Avise
Publisher : World Scientific
Page : 584 pages
File Size : 53,6 Mb
Release : 2010
Category : Science
ISBN : 9789814317757

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Molecular Ecology and Evolution by John C. Avise Pdf

This volume is a reprinted collection of 69 ?classics? from the Avise laboratory, chosen to illustrate a trademark brand of research that harnesses molecular markers to scientific studies of natural history and evolution in the wild. Spanning the early 1970s through the late 2000s, these articles trace how the author and his colleagues have used molecular genetics techniques to address multifarious conceptual topics in genetics, ecology, and evolution, in a fascinating menagerie of creatures with oft-peculiar lifestyles. The organisms described in this volume range from blind cavefish to male-pregnant pipefishes and sea spiders, from clonal armadillos to natal-homing marine turtles, from hermaphroditic sea snails to hybridizing monkeys and tree frogs, from clonal marine sponges to pseudohermaphroditic mollusks to introgressing oysters, and from endangered pocket gophers, terrapins, and sparrows to unisexual (all-female) fish species to ?living-fossil? horseshoe crabs, and even to a strange little fish that routinely mates with itself. The conceptual and molecular topics addressed in this volume are also universal, ranging from punctuated equilibrium to coalescent theory to the need for greater standardization in taxonomy, from cytonuclear disequilibrium statistics to the ideas of speciation duration and sympatric speciation, from historical population demography to phylogenetic reconstructions of males' sexual ornaments, from the population genetic consequences of inbreeding to Pleistocene effects on phylogeography, and from the molecular underpinnings of null alleles to the notion of clustered mutations that arise in groups to compelling empirical evidence for the unanticipated processes of gene conversion and concerted evolution in animal mitochondrial DNA. Overall, this collection includes many of the best, most influential, sometimes controversial, occasionally provocative, always intriguing, or otherwise entertaining publications to have emerged from the Avise laboratory over the last four decades. Thus, this book conveys, through the eyes of one of the field's longstanding pioneers, what ?the organismal side? of molecular ecology and evolution really means.

An Introduction to Molecular Ecology

Author : Trevor Beebee,Graham Rowe
Publisher : Oxford University Press
Page : 418 pages
File Size : 49,7 Mb
Release : 2008
Category : Juvenile Nonfiction
ISBN : 9780199292059

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An Introduction to Molecular Ecology by Trevor Beebee,Graham Rowe Pdf

How do we know whether a particular species is monogamous or promiscuous? How can we monitor the illegal trafficking of wildlife? How can we differentiate between the many similar species making up a microbial community? An Introduction to Molecular Ecology introduces the latest molecular concepts and techniques, demonstrating how genetic markers and molecular tools can be used to answer such ecological questions. Such questions, whose answers were previously out of our reach, can now be probed, thereby revolutionizing our understanding of ecological systems and phenomena. Blending conceptual detail with the most instructive examples, An Introduction to Molecular Ecology is an ideal resource for those new to the subject needing to develop a strong working understanding of the field. The book captures the broad scope of the subject, exploring the use of molecular tools in the context of topics including behavioral genetics, phylogeography, microbial ecology, and conservation. Features - Demonstrates the power of molecular ecology as a research tool in a style ideally suited for an undergraduate audience - Uses practical examples to demonstrate the latest methods and concepts rather than relying exclusively on theoretical models - Blends factual content with tools for active learning

Sketches of Nature

Author : John C. Avise
Publisher : Academic Press
Page : 280 pages
File Size : 48,6 Mb
Release : 2015-09-09
Category : Science
ISBN : 9780128019603

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Sketches of Nature by John C. Avise Pdf

This visually appealing book recounts the history of molecular ecology and evolution as seen through the personal lens of one of its most prolific practitioners, who has studied a panorama of creatures ranging from corals, sponges, and other invertebrates to a wide variety of vertebrate animals including numerous birds, mammals, herps, and fishes. The sketches are of two types: evocative drawings of the animals themselves, and more than 230 written abstracts summarizing the author’s eclectic research on ecological-genetic topics spanning the microevolutionary to macroevolutionary. With the abstracts arranged by organismal group and placed in chronological order, the chapters in this book lead readers on a fascinating historical journey into the realm of molecular genetics as applied across the past four decades to intriguing questions in ecology, evolution, animal behavior, and natural history. Encapsulates salient genetic findings on a diverse array of creatures in nature Recounts the history of technological and conceptual developments in ecological genetics Includes approximately 80 beautiful line drawings of the animals themselves Provides context by preceding each abstract with an anecdote or historical backdrop Concludes each abstract with an addendum that further contextualizes the research findings Written by a world-leading authority in molecular ecology and evolution

Molecular Approaches to Ecology and Evolution

Author : R. deSalle,B. Schierwater
Publisher : Birkhäuser
Page : 371 pages
File Size : 47,8 Mb
Release : 2012-12-06
Category : Science
ISBN : 9783034889483

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Molecular Approaches to Ecology and Evolution by R. deSalle,B. Schierwater Pdf

Four years ago we edited a volume of 36 papers entitled Molecular Approaches to Ecology and Evolution (Schierwater et ai. , 1994), in which we attempted to put to gether a diverse array of papers that demonstrated the impact that the technologi cal revolution ofmolecular biology has had on the field ofevolutionary biologyand ecology. The present volume borrows from that theme but attempts to focus more sharply on the impact that molecular biology has had on our understanding of dif ferent hierarchical levels important in evolutionary and ecological studies. Because DNA sequence variation is at the heart ofeverypaper in the present volume, we feel it necessary to examine how DNA has affected study at various levels of biological organization. The majority of the chapters in the present volume follow themes es tablished in the earlier volume; all chapters by authors in the previous volume are either fully updated or entirely new and expand into areas that we felt were impor tant for a more complete understanding of the impact of DNA technology on ecol ogy and evolution. The collection of papers in this volume cover a diverse array of ecological and evolutionary questions and demonstrates the breadth of coverage molecular tech nology has imparted on modern evolutionary biology. There are also a broad range of hierarchical questions approached by the 17 papers in this volume.

The Triple Helix

Author : Richard C. Lewontin
Publisher : Harvard University Press
Page : 152 pages
File Size : 49,9 Mb
Release : 2000
Category : Philosophy
ISBN : 0674006771

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The Triple Helix by Richard C. Lewontin Pdf

One of our most brilliant evolutionary biologists, Richard Lewontin here provides a concise, accessible account of what his work has taught him about biology and about its relevance to human affairs. In the process, he exposes some of the common and troubling misconceptions that misdirect and stall our understanding of biology and evolution.

Molecular Markers, Natural History and Evolution

Author : J. C. Avise
Publisher : Springer Science & Business Media
Page : 522 pages
File Size : 50,9 Mb
Release : 2012-12-06
Category : Science
ISBN : 9781461523819

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Molecular Markers, Natural History and Evolution by J. C. Avise Pdf

Molecular approaches have opened new windows on a host of ecological and evolutionary disciplines, ranging from population genetics and behavioral ecology to conservation biology and systematics. Molecular Markers, Natural History and Evolution summarizes the multi-faceted discoveries about organisms in nature that have stemmed from analyses of genetic markers provided by polymorphic proteins and DNAs. The first part of the book introduces rationales for the use of molecular markers, provides a history of molecular phylogenetics, and describes a wide variety of laboratory methods and interpretative tools in the field. The second and major portion of the book provides a cornucopia of biological applications for molecular markers, organized along a scale from micro-evolutionary topics (such as forensics, parentage, kinship, population structure, and intra-specific phylogeny) to macro-evolutionary themes (including species relationships and the deeper phylogenetic structure in the tree of life). Unlike most prior books in molecular evolution, the focus is on organismal natural history and evolution, with the macromolecules being the means rather than the ends of scientific inquiry. Written as an intellectual stimulus for the advanced undergraduate, graduate student, or the practicing biologist desiring a wellspring of research ideas at the interface of molecular and organismal biology, this book presents material in a manner that is both technically straightforward, yet rich with concepts and with empirical examples from the world of nature.

Molecular Ecology and Evolution: Approaches and Applications

Author : Bernd Schierwater,Bruno Streit,G.P. Wagner,Rob DeSalle
Publisher : Birkhäuser
Page : 626 pages
File Size : 50,9 Mb
Release : 2013-10-03
Category : Science
ISBN : 3034875290

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Molecular Ecology and Evolution: Approaches and Applications by Bernd Schierwater,Bruno Streit,G.P. Wagner,Rob DeSalle Pdf

In the last 25 years, we have witnessed a revolution in the way that ecologists and evolutionary biologists approach their disciplines. This revolution has been fueled by the ability to dissect the genetic and molecular basis of variation that is partly the currency of these disci plines. Using modern molecular techniques, we have begun to restruc ture the spectrum of questions that can be addressed in studying the mechanisms and consequences of the ecology and evolution of living organisms. The molecular revolution has co me in waves, so to speak, with three particularly important developments. The first concerns the establish ment and widespread use of pro tein analysis. Microcomplement fixation and isozyme e1ectrophoresis were the techniques around which much of the genetic work in ecology and evolution were once based. The next wave started with the development of recombinant DNA technology and centered around the use of restriction fragment length polymor phisms (RFLPs) and sequencing of DNAs cloned in bacteria. This technology was the first to actually examine and accumulate genetic information at the nucleotide level. The most recent wave of technology that we are currently experiencing is based on our ability to amplify DNA sequences enzymatically via the Polymerase Chain Reaction (PCR). Several techniques re1ated to PCR have been developed and used extensively in ecological and evolutionary studies.

Molecular Ecology

Author : Joanna R. Freeland
Publisher : John Wiley & Sons
Page : 403 pages
File Size : 50,6 Mb
Release : 2006-03-30
Category : Science
ISBN : 9780470090633

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Molecular Ecology by Joanna R. Freeland Pdf

Molecular Ecology provides a comprehensive introduction to the many diverse aspects of this subject. The book unites theory with examples from a wide range of taxa in a logical and progressive manner, and its accessible writing style makes subjects such as population genetics and phylogenetics highly comprehensible to its readers. The first part of the book introduces the essential underpinnings of molecular ecology, starting with a review of genetics and a discussion of the molecular markers that are most frequently used in ecological research. This leads into an overview of population genetics in ecology. The second half of the book then moves on to specific applications of molecular ecology, covering phylogeography, behavioural ecology and conservation genetics. The final chapter looks at molecular ecology in a wider context by using a number of case studies that are relevant to various economic and social concerns, including wildlife forensics, agriculture, and overfishing * comprehensive overview of the different aspects of molecular ecology * attention to both theoretical and applied concerns * accessible writing style and logical structure * numerous up-to-date examples and references This will be an invaluable reference for those studying molecular ecology, population genetics, evolutionary biology, conservation genetics and behavioural ecology, as well as researchers working in these fields.

Hermaphroditism

Author : John C. Avise
Publisher : Columbia University Press
Page : 251 pages
File Size : 52,9 Mb
Release : 2011-03-18
Category : Science
ISBN : 9780231527156

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Hermaphroditism by John C. Avise Pdf

While it is true that members of most sexually reproducing species can be defined as either male or female, those who belong to the rest of the biological world are not so simply understood. Hermaphroditic creatures reproduce both as male and as female individuals, providing a fascinating glimpse into alternative sexual practices in nature and their ecological and evolutionary successes and failures. Eloquently written by an award-winning biologist and pioneer in molecular ecology, this primer on hermaphroditism traces the phenomenon throughout Earth's myriad species, accounting for the adaptive significance of alternative sexual systems. Accessible and richly illustrated, the text maps the evolutionary origins of hermaphroditism, as well as its historical instances and fictional representations, underscoring the relevance of dual sexuality to our biological, intellectual, and cultural making. John C. Avise describes the genetics, ecology, phylogeny, and natural history of hermaphroditic plants, fish, and invertebrate animals and details organisms that either reproduce simultaneously as male and female or switch routinely between one sex and the other. Filled with surprising creatures and compelling revelations, this textbook stands alone in its clear yet comprehensive treatment of hermaphroditism and its unique challenge to the supremacy of separate sexes.

Origination of Organismal Form

Author : Gerd B. Muller,Stuart A. Newman
Publisher : MIT Press
Page : 354 pages
File Size : 45,9 Mb
Release : 2003-01-03
Category : Science
ISBN : 0262134195

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Origination of Organismal Form by Gerd B. Muller,Stuart A. Newman Pdf

A more comprehensive version of evolutionary theory that focuses as much on the origin of biological form as on its diversification. The field of evolutionary biology arose from the desire to understand the origin and diversity of biological forms. In recent years, however, evolutionary genetics, with its focus on the modification and inheritance of presumed genetic programs, has all but overwhelmed other aspects of evolutionary biology. This has led to the neglect of the study of the generative origins of biological form. Drawing on work from developmental biology, paleontology, developmental and population genetics, cancer research, physics, and theoretical biology, this book explores the multiple factors responsible for the origination of biological form. It examines the essential problems of morphological evolution—why, for example, the basic body plans of nearly all metazoans arose within a relatively short time span, why similar morphological design motifs appear in phylogenetically independent lineages, and how new structural elements are added to the body plan of a given phylogenetic lineage. It also examines discordances between genetic and phenotypic change, the physical determinants of morphogenesis, and the role of epigenetic processes in evolution. The book discusses these and other topics within the framework of evolutionary developmental biology, a new research agenda that concerns the interaction of development and evolution in the generation of biological form. By placing epigenetic processes, rather than gene sequence and gene expression changes, at the center of morphological origination, this book points the way to a more comprehensive theory of evolution.

Molecular Evolutionary Genetics

Author : Ross J. MacIntyre
Publisher : Springer
Page : 640 pages
File Size : 42,5 Mb
Release : 1985-12-31
Category : Medical
ISBN : UOM:39015010655614

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Molecular Evolutionary Genetics by Ross J. MacIntyre Pdf

This volume in the Monographs in Evolutionary Biology series addresses issues that are part of an emerging area of research loosely called "mo lecular evolution. " Its practitioners include both molecular biologists cu rious about the evolutionary implications of their data and evolutionary biologists pushing their analyses to the molecular level. The union of these fields of molecular and organismal biology has been turbulent at times, and, as shall be seen, this dialectic has led to some very serious challenges to long-held notions about the role of natural selection in evolution and the economy of genome organization in eukaryotes. As an inevitable outgrowth of molecular biology, molecular evolution is necessarily a young discipline, but it can already point proudly to two major discoveries. The first, is the molecular clock, a concept that has emerged from the analysis of at least four data sets-amino acid sequences, immunologic data, DNA renaturation studies, and, recently, analyses of DNA sequences. The reality of a strong stochastic component in the evolution of nucleotide sequences can no longer be doubted, although the accuracy of the clock with regard to particular sequences and within particular groups of or ganisms should be independently measured each time it is used. Never theless, molecular clocks will assume increasingly important roles in phy logenetic reconstructions, especially since the fossil record is so fragmentary. The second major discovery of molecular evolution has been the incredible complexity of the eukaryotic genome.

Integrative Organismal Biology

Author : Lynn B. Martin,Cameron K. Ghalambor,H. Arthur Woods
Publisher : John Wiley & Sons
Page : 344 pages
File Size : 41,8 Mb
Release : 2014-11-13
Category : Science
ISBN : 9781118398791

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Integrative Organismal Biology by Lynn B. Martin,Cameron K. Ghalambor,H. Arthur Woods Pdf

Integrative Organismal Biology synthesizes current understandings of the causes and consequences of individual variation at the physiological, behavioral and organismal levels. Emphasizing key topics such as phenotypic plasticity and flexibility, and summarizing emerging areas such as ecological immunology, oxidative stress biology and others, Integrative Organismal Biology pulls together information from diverse disciplines to provide a synthetic view of the role of the individual in evolution. Beginning with the role of the individual in evolutionary and ecological processes, the book covers theory and mechanism from both classic and modern perspectives. Chapters explore concepts such as phenotypic plasticity, genetic and epigenetic variation, physiological and phenotypic variation, homeostasis, and gene and physiological regulatory networks. A concluding section interweaves these concepts through a series of case studies of life processes such as aging, reproduction, and immune defense. Written and edited by leaders in the field, Integrative Organismal Biology will be an important advanced textbook for students and researchers across a variety of subdisciplines of integrative biology.

On Evolution

Author : John C. Avise
Publisher : JHU Press
Page : 204 pages
File Size : 55,9 Mb
Release : 2007-08-14
Category : Science
ISBN : 0801886899

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On Evolution by John C. Avise Pdf

John Avise is one of the most distinguished evolutionary biologists of our time. His groundbreaking work with mitochondrial DNA created the entire discipline of phylogeography and his work on the Pleistocene refugia hypothesis redirected scientific thinking about patterns of distribution. Spanning a remarkable thirty-five-year career, the essays gathered here were rewritten from his previously published articles and represent the first single-volume collection of Avise's work. Moving through various questions in evolutionary biology, these eclectic essays reveal Avise's unique perspectives on major topics in the field. From how to define a species to the folly of faulty applications of cladistics to connections between conservation and evolutionary biology, On Evolution takes the reader on a personal journey into the mind of one of the world's leading evolutionists. -- Danny Yee

Evolution

Author : Andrés Moya,Enrique Font
Publisher : Oxford University Press on Demand
Page : 333 pages
File Size : 46,9 Mb
Release : 2004
Category : Literary Criticism
ISBN : 019851543X

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Evolution by Andrés Moya,Enrique Font Pdf

Less than 150 years have elapsed since the publication of Darwin's seminal work on evolution by natural selection, yet in this short period of time evolutionary theory has transformed our thinking in all aspects of human endeavor. The rapid progress that has been made, particularly in the last decades, is reflected in this book, which illustrates many key advances in the field and provides a sampler of the diversity of questions and research approaches that constitute the modern study ofevolution. With contributions from leading experts, "Evolution: From Molecules to Ecosystems" addresses issues ranging from the fate of mutations to the origin of new genes, from mechanisms of speciation to patterns of radiation after mass extinctions, from recent migrations to ancient relationships, from symbiosis to virulent disease, and from the origin of play to perceptions of beauty. The book is designed to be advanced and up-to-date, but at the same time accessible and relevant to readers from the fields of genetics, ecology, animal behavior, anthropology and evolutionary biology. It will be particularly useful as a companion text for introductory and upper level courses in evolutionary biology.