Multi Omics For The Understanding Of Brain Diseases

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Integrative Multi-Omics for Diagnosis, Treatments, and Drug Discovery of Aging-Related Neuronal Diseases

Author : Min Tang,Tao Huang,Jialiang Yang,Cheng Guo
Publisher : Frontiers Media SA
Page : 224 pages
File Size : 52,6 Mb
Release : 2022-11-23
Category : Science
ISBN : 9782832506677

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Integrative Multi-Omics for Diagnosis, Treatments, and Drug Discovery of Aging-Related Neuronal Diseases by Min Tang,Tao Huang,Jialiang Yang,Cheng Guo Pdf

As the cost of high-throughput sequencing goes down, huge volumes of biological and medical data have been produced from various sequencing platforms at multiple molecular levels including genome, transcriptome, proteome, epigenome, metabolome, and so on. For a long time, data analysis on single molecular levels has paved the way to answer many important research questions. However, many Aging-Related Neuronal Diseases (ARNDs) and Central Nervous System (CNS) aging involve interactions of molecules from multiple molecular levels, in which conclusions based on single molecular levels are usually incomplete and sometimes misleading. In these scenarios, multi-omics data analysis has unprecedentedly helped capture much more useful information for the diagnosis, treatment, prognosis, and drug discovery of ARNDs. The first step towards a multi-omics analysis is to establish reliable and robust multi-omics datasets. In the past years, a few important ARNDs-associated multi-omics databases like Allen Brain have been constructed, which raised immediate needs like data curation, normalization, interpretation, and visualization for integrative multi-omics explorations. Though there have been several well-established multi-omics databases for ARNDs like Alzheimer’s disease, similar databases for other ARNDs are still in urgent need. After the databases establish, many computational tools and experiential strategies should be developed specifically for them. First, the multi-omics data are usually extremely noisy, complex, heterogeneous and in high dimension, which presents the need for appropriate denoising and dimension reduction methods. Second, since the multi-omics and non-omics data like pathological and clinical data are usually in different data spaces, a useful algorithm to mapping them into the same data space and integrate them is nontrivial. In the multi-omics era, there are numerous data-centric tools for the integration of multi-omics datasets, which could be generally divided into three categories: unsupervised, supervised, and semi-supervised methods. Commonly used algorithms include but not limited to Bayesian-based methods, Network-based methods, multi-step analysis methods, and multiple kernel learning methods. Third, methods are needed in studying and verifying the association between two or more levels of multi-omics data and non-omics data. For example, expression quantitative trait loci (eQTL) analysis is widely used to infer the association between a single nucleotide polymorphism (SNP) and the expression of a gene. Recently, the association between omics data and more complex data like pathological and clinical imaging data has been a hot research topic. The outcomes may reveal the underlying molecular mechanism and promote de novo drug design as well as drug repurposing for ARNDs. Here, we welcome investigators to share their Original Research, Review, Mini Review, Hypothesis and Theory, Perspective, Conceptual Analysis, Data Report, Brief Research Report, Code related to multi-omics studies of ARNDs, which can be applied for better diagnosis, treatment, prognosis and drug discovery of human diseases in the future era of precision medicine. Potential contents include but are not limited to the following: ▪ Methods for integrating, interpreting, or visualizing two or more omics data. ▪ Methods for identifying interactions between different data modalities. ▪ Methods for disease subtyping, biomarker prediction. ▪ Machine learning or deep learning methods on dimensional reduction and feature selection for big noisy data. ▪ Methods for studying the association among different omics data or between omics and non-omics data like clinical, pathological, and imaging data. ▪ Review of multi-omics resource about ARNDs and/or CNS aging. ▪ Experimental validation of biomarkers identified from multi-omics data analysis. ▪ Disease diagnosis and prognosis prediction from imaging and non-imaging data analysis, or both. ▪ Clinical applications or validations of findings from multi-omics data analysis.

Heterogeneity of Alzheimer’s Disease

Author : Francois Boller,F. Forette,Z.S. Khachaturian,Michel Poncet,Ives Christen
Publisher : Springer Science & Business Media
Page : 205 pages
File Size : 51,8 Mb
Release : 2013-03-08
Category : Medical
ISBN : 9783642467769

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Heterogeneity of Alzheimer’s Disease by Francois Boller,F. Forette,Z.S. Khachaturian,Michel Poncet,Ives Christen Pdf

The term "Alzheimer's disease" is currently used to refer to senile and also presenile dementia, but the heterogeneity of this disorder is demonstrated in many of its aspects. This is of great theoretical interest, and with the appearance of new therapeutic interventions, it may well also start to have very significant practical importance. To shed some light on the debate, the Fondation Ipsen organized an international symposium which took place on April 6, 1992. This volume contains the proceedings of this meeting, which was attended by researchers in epidemiology, clinical neurology and geriatrics, neuropsychology, neuropathology, molecular biology, and genetics.

The Neuronal Ceroid Lipofuscinoses (Batten Disease)

Author : Sara Mole,Ruth Williams,Hans Goebel
Publisher : OUP Oxford
Page : 480 pages
File Size : 40,7 Mb
Release : 2011-03-10
Category : Medical
ISBN : 9780191015588

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The Neuronal Ceroid Lipofuscinoses (Batten Disease) by Sara Mole,Ruth Williams,Hans Goebel Pdf

The neuronal ceroid lipofuscinoses are an extremely rare group of inherited neurodegenerative diseases that primarily affect children. Core symptoms of these conditions typically include epilepsy, cognitive decline and visual failure. These diseases are so rare that professionals who come into contact with them need a consultative reference work that enables them to become expert, or identify who to contact for more details. Fully updated and revised, this second edition continues to be the definitive volume on this devastating group of disorders. Written by an international collection of authorities in the field, it provides invaluable advice on their diagnosis, patient care, and new treatments that are available. This new edition of the definitive reference text on the neuronal ceroid lipofuscinoses will prove useful for clinicians, family physicians, research scientists, diagnostic laboratories, families affected by the disease as well as by workers in industry planning translational research.

Biological Insights of Multi-Omics Technologies in Human Diseases

Author : Aarif Ali,Muneeb U Rehman,Sheikh Bilal Ahmad,Azher Arafah
Publisher : Elsevier
Page : 420 pages
File Size : 41,5 Mb
Release : 2024-06-28
Category : Science
ISBN : 9780443239700

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Biological Insights of Multi-Omics Technologies in Human Diseases by Aarif Ali,Muneeb U Rehman,Sheikh Bilal Ahmad,Azher Arafah Pdf

"Biological Insights of Multi-Omics Technologies in Human Diseases ́ provides detailed information about the basics of multi-omic technologies including ethics, historical perspective, science, drug discovery, and development and metabolism. With a strong focus on the practical application of omics approaches in cancer, cardiovascular, neurology, respiratory, viral, gastroenterology, autoimmune diseases, PCOS and tuberculosis, this book also includes special topics related to COVID-19 and Machine learning approaches. In 13 chapters this book provides comprehensive coverage of the challenges and opportunities facing the therapeutic implications of multi-omics from academic, regulatory, pharmaceutical, socio-ethical, and economic perspectives. The chapters are designed in a well-defined chronology such that readers will intuitively understand the central idea. This book is an ideal resource for health professionals, scientists and researchers, nutritionists, health practitioners, students, and all those who wish to broaden their knowledge in the allied field. • Explains the in-depth role of multi-omics on drug discovery/metabolism, diseases, and highlights progress in both the research and clinical areas of computation, as well as relevant implementation experience and challenges. • Describes the practice of multi-omic technologies in the treatment of several diseases. • Includes practical application and machine learning approaches of multi-omics.

Bioinformatics analysis of single cell sequencing and multi-omics in the aging and age-associated diseases

Author : Shouneng Peng,Ailan Wang,Junjun Ding,Lilach Soreq
Publisher : Frontiers Media SA
Page : 139 pages
File Size : 44,5 Mb
Release : 2024-03-13
Category : Science
ISBN : 9782832546321

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Bioinformatics analysis of single cell sequencing and multi-omics in the aging and age-associated diseases by Shouneng Peng,Ailan Wang,Junjun Ding,Lilach Soreq Pdf

Multi-omics, Epigenomics and Computational Analysis of Neurodegenerative Disorders

Author : Manoj Kumar Jaiswal,Deepti Lall,Naveen Kumar Singhal
Publisher : Frontiers Media SA
Page : 133 pages
File Size : 54,6 Mb
Release : 2022-08-03
Category : Science
ISBN : 9782889766918

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Multi-omics, Epigenomics and Computational Analysis of Neurodegenerative Disorders by Manoj Kumar Jaiswal,Deepti Lall,Naveen Kumar Singhal Pdf

Calcific Aortic Valve Disease

Author : Elena Aikawa
Publisher : BoD – Books on Demand
Page : 544 pages
File Size : 50,7 Mb
Release : 2013-06-12
Category : Medical
ISBN : 9789535111504

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Calcific Aortic Valve Disease by Elena Aikawa Pdf

Due to population aging, calcific aortic valve disease (CAVD) has become the most common heart valve disease in Western countries. No therapies exist to slow this disease progression, and surgical valve replacement is the only effective treatment. Calcific Aortic Valve Disease covers the contemporary understanding of basic valve biology and the mechanisms of CAVD, provides novel insights into the genetics, proteomics, and metabolomics of CAVD, depicts new strategies in heart valve tissue engineering and regenerative medicine, and explores current treatment approaches. As we are on the verge of understanding the mechanisms of CAVD, we hope that this book will enable readers to comprehend our current knowledge and focus on the possibility of preventing disease progression in the future.

Frontiers in Psychiatry

Author : Yong-Ku Kim
Publisher : Springer Nature
Page : 641 pages
File Size : 50,7 Mb
Release : 2019-11-09
Category : Science
ISBN : 9789813297210

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Frontiers in Psychiatry by Yong-Ku Kim Pdf

This book reviews key recent advances and new frontiers within psychiatric research and clinical practice. These advances either represent or are enabling paradigm shifts in the discipline and are influencing how we observe, derive and test hypotheses, and intervene. Progress in information technology is allowing the collection of scattered, fragmented data and the discovery of hidden meanings from stored data, and the impacts on psychiatry are fully explored. Detailed attention is also paid to the applications of artificial intelligence, machine learning, and data science technology in psychiatry and to their role in the development of new hypotheses, which in turn promise to lead to new discoveries and treatments. Emerging research methods for precision medicine are discussed, as are a variety of novel theoretical frameworks for research, such as theoretical psychiatry, the developmental approach to the definition of psychopathology, and the theory of constructed emotion. The concluding section considers novel interventions and treatment avenues, including psychobiotics, the use of neuromodulation to augment cognitive control of emotion, and the role of the telomere-telomerase system in psychopharmacological interventions.

Methodologies of Multi-Omics Data Integration and Data Mining

Author : Kang Ning
Publisher : Springer Nature
Page : 173 pages
File Size : 53,6 Mb
Release : 2023-01-15
Category : Medical
ISBN : 9789811982101

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Methodologies of Multi-Omics Data Integration and Data Mining by Kang Ning Pdf

This book features multi-omics big-data integration and data-mining techniques. In the omics age, paramount of multi-omics data from various sources is the new challenge we are facing, but it also provides clues for several biomedical or clinical applications. This book focuses on data integration and data mining methods for multi-omics research, which explains in detail and with supportive examples the “What”, “Why” and “How” of the topic. The contents are organized into eight chapters, out of which one is for the introduction, followed by four chapters dedicated for omics integration techniques focusing on several omics data resources and data-mining methods, and three chapters dedicated for applications of multi-omics analyses with application being demonstrated by several data mining methods. This book is an attempt to bridge the gap between the biomedical multi-omics big data and the data-mining techniques for the best practice of contemporary bioinformatics and the in-depth insights for the biomedical questions. It would be of interests for the researchers and practitioners who want to conduct the multi-omics studies in cancer, inflammation disease, and microbiome researches.

Pulmonomics: Omics Approaches for Understanding Pulmonary Diseases

Author : Sudipto Saha,Sreyashi Majumdar,Parthasarathi Bhattacharyya
Publisher : Springer Nature
Page : 411 pages
File Size : 46,8 Mb
Release : 2023-12-03
Category : Medical
ISBN : 9789819935055

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Pulmonomics: Omics Approaches for Understanding Pulmonary Diseases by Sudipto Saha,Sreyashi Majumdar,Parthasarathi Bhattacharyya Pdf

This book comprehensively reviews various omics approaches like genomics, proteomics, transcriptomics, and metabolomics for understanding pulmonary disease at molecular and systems levels. The initial chapters present the pathogenesis of major pulmonary diseases, namely, obstructive diseases, restrictive diseases, vascular diseases, infectious diseases, and neoplastic carcinoma. The book chapters provide current information about the role of the microbiome and applications of medical imaging, bioinformatics tools, and databases for diagnosis and designing treatment strategies against complex lung diseases. Further, the book discusses omics technologies to identify biomarkers for the early diagnosis and prognosis of pulmonary diseases. Finally, the book elucidates the multi-omics approaches and data integration using mathematical modeling for insights into the disease etiology towards improving the prognostics and predictive accuracy of disease phenotypes. ​

Lipidomics in Health & Disease

Author : Xiangdong Wang,Duojiao Wu,Huali Shen
Publisher : Springer
Page : 204 pages
File Size : 41,9 Mb
Release : 2018-08-30
Category : Science
ISBN : 9789811306204

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Lipidomics in Health & Disease by Xiangdong Wang,Duojiao Wu,Huali Shen Pdf

This volume covers the emerging area of science, Clinical Lipidomics, which is the application of lipidology to the understanding of physiological and pathophysiological changes of lipidomes, with a special focus on lipidomic profiles in human diseases. Lipidomics is widely used to map lipid molecular species in a biological system. Clinical lipidomic analysis has demonstrated the comprehensive characterization of molecular lipids in various severities, durations, and therapies as a critical tool in identification and validation of disease-specific biomarkers. This volume on Clinical Lipidomics will add to the literature and help advance the knowledge of the pathogenesis, diagnosis, prevention and treatment of diseases.

Integrative Omics

Author : Manish Kumar Gupta,Pramod Katara,Sukanta Mondal,Ram Lakhan Singh
Publisher : Elsevier
Page : 434 pages
File Size : 43,6 Mb
Release : 2024-05-10
Category : Science
ISBN : 9780443160936

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Integrative Omics by Manish Kumar Gupta,Pramod Katara,Sukanta Mondal,Ram Lakhan Singh Pdf

Integrative Omics: Concepts, Methodology and Applications provides a holistic and integrated view of defining and applying network approaches, integrative tools, and methods to solve problems for the rationalization of genotype to phenotype relationships. The reference includes a range of chapters in a systemic ‘step by step’ manner, which begins with the basic concepts from Omic to Multi Integrative Omics approaches, followed by their full range of approaches, applications, emerging trends, and future trends. All key areas of Omics are covered including biological databases, sequence alignment, pharmacogenomics, nutrigenomics and microbial omics, integrated omics for Food Science and Identification of genes associated with disease, clinical data integration and data warehousing, translational omics as well as omics technology policy and society research. Integrative Omics: Concepts, Methodology and Applications highlights the recent concepts, methodologies, advancements in technologies and is also well-suited for researchers from both academic and industry background, undergraduate and graduate students who are mainly working in the area of computational systems biology, integrative omics and translational science. The book bridges the gap between biological sciences, physical sciences, computer science, statistics, data science, information technology and mathematics by presenting content specifically dedicated to mathematical models of biological systems. Provides a holistic, integrated view of a defining and applying network approach, integrative tools, and methods to solve problems for rationalization of genotype to phenotype relationships Offers an interdisciplinary approach to Databases, data analytics techniques, biological tools, network construction, analysis, modeling, prediction and simulation of biological systems leading to ‘translational research’, i.e., drug discovery, drug target prediction, and precision medicine Covers worldwide methods, concepts, databases, and tools used in the construction of integrated pathways