Quantum Bioinformatics Four

Author : Luigi Accardi
Publisher : World Scientific
Page : 503 pages
File Size : 53,7 Mb
Release : 2011
Category : Computers
ISBN : 9789814343763

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Quantum Bioinformatics Four by Luigi Accardi Pdf

The purpose of this proceedings volume is to return to the starting point of bio-informatics and quantum information, fields that are growing rapidly at present, and to seriously attempt mutual interaction between the two, with a view to enumerating and solving the many fundamental problems they entail. For such a purpose, we look for interdisciplinary bridges in mathematics, physics, information and life sciences, in particular, research for new paradigm for information science and life science on the basis of quantum theory.

Author : Alia Tadjer,Rossen Pavlov,Jean Maruani,Erkki J. Brändas,Gerardo Delgado-Barrio
Publisher : Springer
Page : 449 pages
File Size : 45,7 Mb
Release : 2017-05-30
Category : Science
ISBN : 9783319502557

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Quantum Systems in Physics, Chemistry, and Biology by Alia Tadjer,Rossen Pavlov,Jean Maruani,Erkki J. Brändas,Gerardo Delgado-Barrio Pdf

This book reviews the most significant developments in quantum methodology applied to a broad variety of problems in chemistry, physics, and biology. In particular, it discusses atomic and molecular structure, dynamics and spectroscopy as well as applications of quantum theory to biological and condensed matter systems. The volume contains twenty-four selected, peer-reviewed contributions based on the presentations given at the Twentieth International Workshop on Quantum Systems in Chemistry, Physics, and Biology (QSCP-XX), held in Varna, Bulgaria, in September 2015. It is divided into five sections containing the most relevant papers written by leading experts in the fields. This book will appeal to advanced graduate students, researchers, and academics involved in theoretical, quantum or statistical and computational chemical physics and physical chemistry.

Author : L. Accardi
Publisher : World Scientific
Page : 357 pages
File Size : 49,9 Mb
Release : 2009-02-12
Category : Computers
ISBN : 9789814273756

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Quantum Bio-Informatics II by L. Accardi Pdf

The purpose of this proceedings volume is to look for interdisciplinary bridges in mathematics, physics, information and life sciences, in particular, research for new paradigms for information and life sciences on the basis of quantum theory. The main areas in this volume are all related to one of the following subjects: (1) mathematical foundation of quantum mechanics, (2) quantum information, (3) quantum algorithm and computation, (4) quantum communication, (5) white noise analysis and quantum dynamics, (6) chaos dynamics and adaptive dynamics, (7) experimental studies of quantum computer, (8) bio-informatics and (9) genome analysis.

Author : Anonim
Publisher : Unknown
Page : 128 pages
File Size : 52,7 Mb
Release : 2024-06-16
Category : Electronic
ISBN : 9789814467780

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Quantum Bio-Informatics II by Anonim Pdf

Author : Alexander V. Glushkov,Olga Yu. Khetselius,Jean Maruani,Erkki Brändas
Publisher : Springer Nature
Page : 358 pages
File Size : 54,7 Mb
Release : 2021-06-29
Category : Science
ISBN : 9783030683146

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Advances in Methods and Applications of Quantum Systems in Chemistry, Physics, and Biology by Alexander V. Glushkov,Olga Yu. Khetselius,Jean Maruani,Erkki Brändas Pdf

This book reviews the most significant advances in concepts, methods, and applications of quantum systems in a broad variety of problems in modern chemistry, physics, and biology. In particular, it discusses atomic, molecular, and solid structure, dynamics and spectroscopy, relativistic and correlation effects in quantum chemistry, topics of computational chemistry, physics and biology, as well as applications of theoretical chemistry and physics in advanced molecular and nano-materials and biochemical systems. The book contains peer-reviewed contributions written by leading experts in the fields and based on the presentations given at the Twenty-Fourth International Workshop on Quantum Systems in Chemistry, Physics, and Biology held in Odessa, Ukraine, in August 2019. This book is aimed at advanced graduate students, academics, and researchers, both in university and corporation laboratories, interested in state-of-the-art and novel trends in quantum chemistry, physics, biology, and their applications.

Author : Adam Liwo
Publisher : Springer
Page : 851 pages
File Size : 51,8 Mb
Release : 2018-12-19
Category : Technology & Engineering
ISBN : 9783319958439

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Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes by Adam Liwo Pdf

This book provides a comprehensive overview of modern computer-based techniques for analyzing the structure, properties and dynamics of biomolecules and biomolecular processes. It is organized in four main parts; the first one deals with methodology of molecular simulations; the second one with applications of molecular simulations; the third one introduces bioinformatics methods and the use of experimental information in molecular simulations; the last part reports on selected applications of molecular quantum mechanics. This second edition has been thoroughly revised and updated to include the latest progresses made in the respective field of research.

Author : Petoukhov, Sergey,He, Matthew
Publisher : IGI Global
Page : 290 pages
File Size : 43,7 Mb
Release : 2009-10-31
Category : Computers
ISBN : 9781605661254

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Symmetrical Analysis Techniques for Genetic Systems and Bioinformatics: Advanced Patterns and Applications by Petoukhov, Sergey,He, Matthew Pdf

"This book compiles studies that demonstrate effective approaches to the structural analysis of genetic systems and bioinformatics"--Provided by publisher.

Author : Luigi Accardi,Wolfgang Freudenberg,Masanori Ohya
Publisher : World Scientific
Page : 469 pages
File Size : 55,8 Mb
Release : 2008
Category : Science
ISBN : 9789812793171

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Quantum Bio-informatics by Luigi Accardi,Wolfgang Freudenberg,Masanori Ohya Pdf

The purpose of this volume is examine bio-informatics and quantum information, which are growing rapidly at present, and to attempt to connect the two, with a view to enumerating and solving the many fundamental problems they entail. To this end, we look for interdisciplinary bridges in mathematics, physics, and information and life sciences. In particular, research into a new paradigm for information science and life science on the basis of quantum theory is emphasized. Sample Chapter(s). Markov Fields on Graphs (599 KB). Contents: Markov Fields on Graphs (L Accardi & H Ohno); Some Aspects of Time Operators (A Arai); Time Optimal Quantum Control of Mixed States (A Carlini et al.); On a Quantum Model of the Recognition Process (K-H Fichtner et al.); Perspectives of White Noise Analysis (T Hida); Review on Quantum Chaos Algorithm and Generalized Quantum Turing Machine (S Iriyama & M Ohya); Cauchy Problems for Some Biological Systems OCo Modelling by Stochastic Differential Equations (A Jamiolkowski); On Non-Markovian Time Evolution in Open Quantum Systems (A Kossakowski & R Rebolledo); Adaptive Dynamics and Its Applications to Chaos and NPC Problem (M Ohya); Micro-Macro Duality and Emergence of Macroscopic Levels (I Ojima); Josephson Flux Qubit (H Takayanagi); Note on Quantum Mutual Entropy Type Measures (N Watanabe); Toward in Silico Biology (From Sequence to Systems) (I Yamato et al.); and other papers. Readership: Physicists, researchers in quantum information and bioinformatics.

Author : Ivan B. Djordjevic
Publisher : Springer
Page : 278 pages
File Size : 43,5 Mb
Release : 2015-10-05
Category : Technology & Engineering
ISBN : 9783319228167

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Quantum Biological Information Theory by Ivan B. Djordjevic Pdf

This book is a self-contained, tutorial-based introduction to quantum information theory and quantum biology. It serves as a single-source reference to the topic for researchers in bioengineering, communications engineering, electrical engineering, applied mathematics, biology, computer science, and physics. The book provides all the essential principles of the quantum biological information theory required to describe the quantum information transfer from DNA to proteins, the sources of genetic noise and genetic errors as well as their effects. Integrates quantum information and quantum biology concepts; Assumes only knowledge of basic concepts of vector algebra at undergraduate level; Provides a thorough introduction to basic concepts of quantum information processing, quantum information theory, and quantum biology; Includes in-depth discussion of the quantum biological channel modelling, quantum biological channel capacity calculation, quantum models of aging, quantum models of evolution, quantum models on tumor and cancer development, quantum modeling of bird navigation compass, quantum aspects of photosynthesis, quantum biological error correction.

Author : Masanari Asano,Andrei Khrennikov,Masanori Ohya,Yoshiharu Tanaka,Ichiro Yamato
Publisher : Springer
Page : 173 pages
File Size : 49,7 Mb
Release : 2015-04-14
Category : Science
ISBN : 9789401798198

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Quantum Adaptivity in Biology: From Genetics to Cognition by Masanari Asano,Andrei Khrennikov,Masanori Ohya,Yoshiharu Tanaka,Ichiro Yamato Pdf

This book examines information processing performed by bio-systems at all scales: from genomes, cells and proteins to cognitive and even social systems. It introduces a theoretical/conceptual principle based on quantum information and non-Kolmogorov probability theory to explain information processing phenomena in biology as a whole. The book begins with an introduction followed by two chapters devoted to fundamentals, one covering classical and quantum probability, which also contains a brief introduction to quantum formalism, and another on an information approach to molecular biology, genetics and epigenetics. It then goes on to examine adaptive dynamics, including applications to biology, and non-Kolmogorov probability theory. Next, the book discusses the possibility to apply the quantum formalism to model biological evolution, especially at the cellular level: genetic and epigenetic evolutions. It also presents a model of the epigenetic cellular evolution based on the mathematical formalism of open quantum systems. The last two chapters of the book explore foundational problems of quantum mechanics and demonstrate the power of usage of positive operator valued measures (POVMs) in biological science. This book will appeal to a diverse group of readers including experts in biology, cognitive science, decision making, sociology, psychology, and physics; mathematicians working on problems of quantum probability and information and researchers in quantum foundations.

Author : Peter Markstein,Ying Xu
Publisher : World Scientific
Page : 355 pages
File Size : 45,6 Mb
Release : 2008
Category : Science
ISBN : 9781848162631

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Computational Systems Bioinformatics by Peter Markstein,Ying Xu Pdf

This proceedings volume contains 29 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field.

Author : Luigi Accardi,Wolfgang Freudenberg,Masanori Ohya
Publisher : World Scientific
Page : 512 pages
File Size : 46,5 Mb
Release : 2010
Category : Science
ISBN : 9789814304061

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Quantum Bio-informatics III by Luigi Accardi,Wolfgang Freudenberg,Masanori Ohya Pdf

Classical and quantum conditioning : mathematical and information theoretical aspects / L. Accardi -- Dynamics and potentials / F. Araki -- Kossakowski-Ohya teleportation scheme and its applications / M. Asano, M. Ohya and Y. Tanaka -- Utility and value of information in cognitive science, biology and quantum theory / R.V. Belavkin -- Spectral properties of entanglement witnesses and positive maps / D. Chruściński -- Quantum entanglement and multipartite symmetric states / D. Chruściński -- On a quantum model of brain activities / K.-H. Fichtner [und weitere] -- Some of the recent topics in white noise theory / T. Hida -- Note on generalized white noise functionals / T. Hida -- On estimation of the position distribution of the ideal Bose gas / K.-H. Fichtner, K. Inoue and M. Ohya -- On generalization of quantum mutual entropy by using liftings / S. Iriyama and M. Ohya -- A new approach to stroboscopic tomography of open systems / A. Jamiolkowski -- An introduction to frames and their applications to quantum optics / A. Jamiolkowski -- Memory in a nonlocally damped oscillator / D. Chruściński and J. Jurkowski -- An introduction to quantization of dissipative systems. The damped harmonic oscillator case / J. Jurkowski -- Classical and quantum probability for biologists - introduction / A. Khrennikov -- 2-adic degeneration of the genetic code and energy of binding of codons / A. Yu. Khrennikov and S.V. Kozyrev -- On positive maps; PPT states and entanglement / W.A. Majewski -- Detecting entanglement in spin lattice models / M. Michalski -- How to detect entanglement in quantum systems / M. Michalskii -- Tunneling study on high-T[symbol] superconductors / M. Minematsu, S. Kawashima and N. Miyakawa -- Quantum dynamics of superconducting qubit readout with a driven nonlinear Josephson oscillator / H. Nakano -- Roles of asymptotic condition and S-matrix as micro-macro duality in QFT / I. Ojima -- Gaussian Markov triplets / D. Petz and J. Pitrik -- pre-mRNA introns as a model for cryptographic algorithm : theory and experiments / M. Regoli -- Duality arising from multiple Markov Gaussian processes / Si Si and W.W. Htay -- Novel computational approaches to drug discovery / J. Skolnick and M. Brylinski -- Feynman type formulae for quantum evolution and diffusion on manifolds and graphs / O.G. Smolyanov -- Poisson noise and the dynamics of infinite particle systems / L. Streit -- Replica-exchange molecular dynamics simulations of Amyloid precursor protein dimer in membrane / N. Miyashita and Y. Sugita -- Comparison of square contingency tables using measure of departure from marginal homogeneity / K. Tahata [und weitere] -- On the statics for micro-array data analysis / T. Urushibara [und weitere] -- Functional mechanics and time irreversibility problem / I.V. Volovich -- Regulatory networks : inferring functional relationships through co-expression / D. Wanke [und weitere] -- On entropies of quantum dynamical systems / N. Watanabe -- Significant improvement of sequence alignment can be done by considering transition probability between two consecutive pairs of residues / T. Ham, K. Sato and M. Ohya -- A computational approach to explore protein translocation through Type III secretion apparatus / T. Rathinavelan and W. Im -- Carbon nanotubes for building blocks of quantum computing devices / K. Ishibashi [und weitere] -- In silico analysis for the study of botulinum toxin structure / T. Suzuki and S. Miyazaki -- Gene discovery methods from large-scale gene expression data / A. Shimizu and K. Yano

Author : Peter Markstein,Ying Xu
Publisher : World Scientific
Page : 356 pages
File Size : 40,7 Mb
Release : 2008-08-01
Category : Mathematics
ISBN : 9781908978707

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Computational Systems Bioinformatics by Peter Markstein,Ying Xu Pdf

This proceedings volume contains 29 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field. Contents: Voting Algorithms for the Motif Finding Problem (X-W Liu et al.)MSDash: Mass Spectrometry Database and Search (Z Wu et al.)GaborLocal: Peak Detection in Mass Spectrum by Gabor Filters and Gaussian Local Maxima (N Nguyen et al.)Designing Secondary Structure Profiles for Fast ncRNA Identification (Y Sun & J Buhler)Iterative Non-sequential Protein Structural Alignment (S Salem & M J Zaki)Consistent Alignment of Metabolic Pathways Without Abstraction (F Ay et al.)On the Accurate Construction of Consensus Genetic Maps (Y-H Wu et al.)Graph Wavelet Alignment Kernels for Drug Virtual Screening (A Smalter et al.)and other papers Readership: Graduate students, postdoctoral fellows, researchers, and practitioners in the field of bioinformatics and systems biology; biotech and pharmaceutical companies; computational scientists and engineers interested in biology. Keywords:Bioinformatics;Computational Systems Biology;Computational Techniques;Systems Biology ProblemsKey Features:The CSB meetings accept only the highest-quality research papers, with a paper-acceptance rate of below 20%The CSB meetings represent a unique bioinformatics conference in which papers blend bioinformatic tool development with in silico biologyCSB meetings have become one of the most well-attended bioinformatics conferencesCSB proceedings are indexed by Medline

Author : Florentin Smarandache,Muhammad Aslam
Publisher : Elsevier
Page : 495 pages
File Size : 45,6 Mb
Release : 2023-02-11
Category : Computers
ISBN : 9780323994576

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Cognitive Intelligence with Neutrosophic Statistics in Bioinformatics by Florentin Smarandache,Muhammad Aslam Pdf

Cognitive Intelligence with Neutrosophic Statistics in Bioinformatics investigates and presents the many applications that have arisen in the last ten years using neutrosophic statistics in bioinformatics, medicine, agriculture and cognitive science. This book will be very useful to the scientific community, appealing to audiences interested in fuzzy, vague concepts from which uncertain data are collected, including academic researchers, practicing engineers and graduate students. Neutrosophic statistics is a generalization of classical statistics. In classical statistics, the data is known, formed by crisp numbers. In comparison, data in neutrosophic statistics has some indeterminacy. This data may be ambiguous, vague, imprecise, incomplete, and even unknown. Neutrosophic statistics refers to a set of data, such that the data or a part of it are indeterminate in some degree, and to methods used to analyze the data. Introduces the field of neutrosophic statistics and how it can solve problems working with indeterminate (imprecise, ambiguous, vague, incomplete, unknown) data Presents various applications of neutrosophic statistics in the fields of bioinformatics, medicine, cognitive science and agriculture Provides practical examples and definitions of neutrosophic statistics in relation to the various types of indeterminacies

Author : Adam Liwo
Publisher : Unknown
Page : 128 pages
File Size : 53,7 Mb
Release : 2019
Category : SCIENCE
ISBN : 3319958445

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Computational Methods to Study the Structure and Dynamics of Biomolecules and Biomolecular Processes by Adam Liwo Pdf

This book provides a comprehensive overview of modern computer-based techniques for analyzing the structure, properties and dynamics of biomolecules and biomolecular processes. It is organized in four main parts; the first one deals with methodology of molecular simulations; the second one with applications of molecular simulations; the third one introduces bioinformatics methods and the use of experimental information in molecular simulations; the last part reports on selected applications of molecular quantum mechanics. This second edition has been thoroughly revised and updated to include the latest progresses made in the respective field of research.