Spatiotemporal Patterns In Ecology And Epidemiology
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Spatiotemporal Patterns in Ecology and Epidemiology by Horst Malchow,Sergei V. Petrovskii,Ezio Venturino Pdf
Although the spatial dimension of ecosystem dynamics is now widely recognized, the specific mechanisms behind species patterning in space are still poorly understood and the corresponding theoretical framework is underdeveloped. Going beyond the classical Turing scenario of pattern formation, Spatiotemporal Patterns in Ecology and Epidemiology:
Spatio-Temporal Methods in Environmental Epidemiology by Gavin Shaddick,James V. Zidek Pdf
Teaches Students How to Perform Spatio-Temporal Analyses within Epidemiological Studies Spatio-Temporal Methods in Environmental Epidemiology is the first book of its kind to specifically address the interface between environmental epidemiology and spatio-temporal modeling. In response to the growing need for collaboration between statisticians and environmental epidemiologists, the book links recent developments in spatio-temporal methodology with epidemiological applications. Drawing on real-life problems, it provides the necessary tools to exploit advances in methodology when assessing the health risks associated with environmental hazards. The book’s clear guidelines enable the implementation of the methodology and estimation of risks in practice. Designed for graduate students in both epidemiology and statistics, the text covers a wide range of topics, from an introduction to epidemiological principles and the foundations of spatio-temporal modeling to new research directions. It describes traditional and Bayesian approaches and presents the theory of spatial, temporal, and spatio-temporal modeling in the context of its application to environmental epidemiology. The text includes practical examples together with embedded R code, details of specific R packages, and the use of other software, such as WinBUGS/OpenBUGS and integrated nested Laplace approximations (INLA). A supplementary website provides additional code, data, examples, exercises, lab projects, and more. Representing a major new direction in environmental epidemiology, this book—in full color throughout—underscores the increasing need to consider dependencies in both space and time when modeling epidemiological data. Students will learn how to identify and model patterns in spatio-temporal data as well as exploit dependencies over space and time to reduce bias and inefficiency.
Spatio–Temporal Methods in Environmental Epidemiology with R by Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt Pdf
Spatio-Temporal Methods in Environmental Epidemiology with R, like its First Edition, explores the interface between environmental epidemiology and spatio-temporal modeling. It links recent developments in spatio-temporal theory with epidemiological applications. Drawing on real-life problems, it shows how recent advances in methodology can assess the health risks associated with environmental hazards. The book's clear guidelines enable the implementation of the methodology and estimation of risks in practice. New additions to the Second Edition include: a thorough exploration of the underlying concepts behind knowledge discovery through data; a new chapter on extracting information from data using R and the tidyverse; additional material on methods for Bayesian computation, including the use of NIMBLE and Stan; new methods for performing spatio-temporal analysis and an updated chapter containing further topics. Throughout the book there are new examples, and the presentation of R code for examples has been extended. Along with these additions, the book now has a GitHub site (https://spacetime-environ.github.io/stepi2) that contains data, code and further worked examples. Features: • Explores the interface between environmental epidemiology and spatio-temporal modeling • Incorporates examples that show how spatio-temporal methodology can inform societal concerns about the effects of environmental hazards on health • Uses a Bayesian foundation on which to build an integrated approach to spatio-temporal modeling and environmental epidemiology • Discusses data analysis and topics such as data visualization, mapping, wrangling and analysis • Shows how to design networks for monitoring hazardous environmental processes and the ill effects of preferential sampling • Through the listing and application of code, shows the power of R, tidyverse, NIMBLE and Stan and other modern tools in performing complex data analysis and modeling Representing a continuing important direction in environmental epidemiology, this book – in full color throughout – underscores the increasing need to consider dependencies in both space and time when modeling epidemiological data. Readers will learn how to identify and model patterns in spatio-temporal data and how to exploit dependencies over space and time to reduce bias and inefficiency when estimating risks to health.
Spatio-temporal Methods in Environmental Epidemiology with R by Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt Pdf
"Spatio-Temporal Methods in Environmental Epidemiology with R, Second Edition is the first book of its kind to specifically address the interface between environmental epidemiology and spatio-temporal modeling. In response to the growing need for collaboration between statisticians and environmental epidemiologists. The book links recent developments in spatio-temporal methodology with epidemiological applications. Drawing on real-life problems, it provides the necessary tools to exploit advances in methodology when assessing the health risks associated with environmental hazards. The book's clear guidelines enable the implementation of the methodology and estimation of risks in practice. Designed for graduate students in both epidemiology and statistics, the text covers a wide range of topics, from an introduction to epidemiological principles and the foundations of spatio-temporal MED, to new research directions. It describes traditional and Bayesian approaches and presents the theory of spatial, temporal, and spatio-temporal modeling in the context of its application to environmental epidemiology. The text includes practical examples, together with embedded R code, details of specific R packages, and the use of other software, such as WinBUGS/OpenBUGS and integrated nested Laplace approximations (INLA). A supplementary website provides additional code, data, examples, exercises, lab projects, and more. New to this edition: Includes a new chapter on data science Updated material on measurement error, deterministic modeling, infectious diseases, and preferential sampling Introduces modern computational methods, including INLA, together with code for implementation Represents a major new direction in environmental epidemiology, this book-in full color throughout-underscoring the increasing need to consider dependencies in both space and time when modeling epidemiological data. Students will learn how to identify and model patterns in spatio-temporal data as well as exploit dependencies over space and time to reduce bias and inefficiency"--
Spatiotemporal Patterns in Models of Biological Invasion and Epidemic Spread by Frank Mathias Hilker Pdf
Biological invasions are a severe ecological problem threatening biodiversity and causing substantial economic damages. Mathematical models of spatiotemporal spread have proven to be powerful tools in identifying the underlying mechanisms, thus contributing to the understanding of the factors that determine invasion processes and to the assessment of possible control methods. In this thesis, classical models are extended to combine spatial spread, population growth, disease transmission and community interactions. Applications are exemplarily found in the circulation of the Feline Immunodeficiency Virus (FIV) - an HIV-similar lentivirus that induces AIDS in cat populations - and in viral infections in phytoplankton that forms the basis for all food chains and webs in the sea. The joint interplay of epidemics, predation and environmental stochasticity in invasion models is shown to generate rich and novel patterns of spatiotemporal spread such as the blocking and reversal of invasion fronts or the spatial `trapping' of infection as well as its noise-induced escape. The results of this thesis can explain real-world phenomena and have important implications for understanding and controlling invasion processes in ecosystems and epidemiology.
Modelling Complex Ecological Dynamics by Fred Jopp,Hauke Reuter,Broder Breckling Pdf
Model development is of vital importance for understanding and management of ecological processes. Identifying the complex relationships between ecological patterns and processes is a crucial task. Ecological modelling—both qualitatively and quantitatively—plays a vital role in analysing ecological phenomena and for ecological theory. This textbook provides a unique overview of modelling approaches. Representing the state-of-the-art in modern ecology, it shows how to construct and work with various different model types. It introduces the background of each approach and its application in ecology. Differential equations, matrix approaches, individual-based models and many other relevant modelling techniques are explained and demonstrated with their use. The authors provide links to software tools and course materials. With chapters written by leading specialists, “Modelling Complex Ecological Dynamics” is an essential contribution to expand the qualification of students, teachers and scientists alike.
Dispersal, Individual Movement and Spatial Ecology by Mark A. Lewis,Philip K. Maini,Sergei V. Petrovskii Pdf
Dispersal of plants and animals is one of the most fascinating subjects in ecology. It has long been recognized as an important factor affecting ecosystem dynamics. Dispersal is apparently a phenomenon of biological origin; however, because of its complexity, it cannot be studied comprehensively by biological methods alone. Deeper insights into dispersal properties and implications require interdisciplinary approaches involving biologists, ecologists and mathematicians. The purpose of this book is to provide a forum for researches with different backgrounds and expertise and to ensure further advances in the study of dispersal and spatial ecology. This book is unique in its attempt to give an overview of dispersal studies across different spatial scales, such as the scale of individual movement, the population scale and the scale of communities and ecosystems. It is written by top-level experts in the field of dispersal modeling and covers a wide range of problems ranging from the identification of Levy walks in animal movement to the implications of dispersal on an evolutionary timescale.
Mathematics in Engineering Sciences by Mangey Ram Pdf
This book includes research studies, novel theory, as well as new methodology and applications in mathematics and management sciences. The book will provide a comprehensive range of mathematics applied to engineering areas for different tasks. It will offer an international perspective and a bridge between classical theory and new methodology in many areas, along with real-life applications. Features Offers solutions to multi-objective transportation problem under cost reliability using utility function Presents optimization techniques to support eco-efficiency assessment in manufacturing processes Covers distance-based function approach for optimal design of engineering processes with multiple quality characteristics Provides discrete time sliding mode control for non-linear networked control systems Discusses second law of thermodynamics as instruments for optimizing fluid dynamic systems and aerodynamic systems
Applications of Chaos and Nonlinear Dynamics in Science and Engineering - Vol. 4 by Santo Banerjee,Lamberto Rondoni Pdf
Chaos and nonlinear dynamics initially developed as a new emergent field with its foundation in physics and applied mathematics. The highly generic, interdisciplinary quality of the insights gained in the last few decades has spawned myriad applications in almost all branches of science and technology—and even well beyond. Wherever quantitative modeling and analysis of complex, nonlinear phenomena is required, chaos theory and its methods can play a key role. his fourth volume concentrates on reviewing further relevant contemporary applications of chaotic and nonlinear dynamics as they apply to the various cuttingedge branches of science and engineering. This encompasses, but is not limited to, topics such as synchronization in complex networks and chaotic circuits, time series analysis, ecological and biological patterns, stochastic control theory and vibrations in mechanical systems. Featuring contributions from active and leading research groups, this collection is ideal both as a reference and as a ‘recipe book’ full of tried and tested, successful engineering applications.
Structured Population Models in Biology and Epidemiology by Pierre Magal,Shigui Ruan Pdf
In this new century mankind faces ever more challenging environmental and publichealthproblems,suchaspollution,invasionbyexoticspecies,theem- gence of new diseases or the emergence of diseases into new regions (West Nile virus,SARS,Anthrax,etc.),andtheresurgenceofexistingdiseases(in?uenza, malaria, TB, HIV/AIDS, etc.). Mathematical models have been successfully used to study many biological, epidemiological and medical problems, and nonlinear and complex dynamics have been observed in all of those contexts. Mathematical studies have helped us not only to better understand these problems but also to ?nd solutions in some cases, such as the prediction and control of SARS outbreaks, understanding HIV infection, and the investi- tion of antibiotic-resistant infections in hospitals. Structuredpopulationmodelsdistinguishindividualsfromoneanother- cording to characteristics such as age, size, location, status, and movement, to determine the birth, growth and death rates, interaction with each other and with environment, infectivity, etc. The goal of structured population models is to understand how these characteristics a?ect the dynamics of these models and thus the outcomes and consequences of the biological and epidemiolo- cal processes. There is a very large and growing body of literature on these topics. This book deals with the recent and important advances in the study of structured population models in biology and epidemiology. There are six chapters in this book, written by leading researchers in these areas.
Recent Advances in Mathematics for Engineering by Mangey Ram Pdf
In recent years, mathematics has experienced amazing growth in the engineering sciences. Mathematics forms the common foundation of all engineering disciplines. This book provides a comprehensive range of mathematics applied in various fields of engineering for different tasks such as civil engineering, structural engineering, computer science, and electrical engineering, among others. It offers chapters that develop the applications of mathematics in engineering sciences, conveys the innovative research ideas, offers real-world utility of mathematics, and has a significance in the life of academics, practitioners, researchers, and industry leaders. Features Focuses on the latest research in the field of engineering applications Includes recent findings from various institutions Identifies the gaps in the knowledge in the field and provides the latest approaches Presents international studies and findings in modeling and simulation Offers various mathematical tools, techniques, strategies, and methods across different engineering fields
Nonlinear Physics of Ecosystems introduces the concepts and tools of pattern formation theory and demonstrates their utility in ecological research using problems from spatial ecology. Written in language understandable to both physicists and ecologists in most parts, the book reveals the mechanisms of pattern formation and pattern dynamics. It also explores the implications of these mechanisms in important ecological problems. The first part of the book gives an overview of pattern formation and spatial ecology, showing how these disparate research fields are strongly related to one another. The next part presents an advanced account of pattern formation theory. The final part describes applications of pattern formation theory to ecological problems, including self-organized vegetation patchiness, desertification, and biodiversity in changing environments. Focusing on the emerging interface between spatial ecology and pattern formation, this book shows how pattern formation methods address a variety of ecological problems using water-limited ecosystems as a case study. Readers with basic knowledge of linear algebra and ordinary differential equations will develop a general understanding of pattern formation theory while more advanced readers who are familiar with partial differential equations will appreciate the descriptions of analytical tools used to study pattern formation and dynamics.
Introduction to Mathematical Modeling and Chaotic Dynamics by Ranjit Kumar Upadhyay,Satteluri R. K. Iyengar Pdf
Introduction to Mathematical Modeling and Chaotic Dynamics focuses on mathematical models in natural systems, particularly ecological systems. Most of the models presented are solved using MATLAB®. The book first covers the necessary mathematical preliminaries, including testing of stability. It then describes the modeling of systems from natural science, focusing on one- and two-dimensional continuous and discrete time models. Moving on to chaotic dynamics, the authors discuss ways to study chaos, types of chaos, and methods for detecting chaos. They also explore chaotic dynamics in single and multiple species systems. The text concludes with a brief discussion on models of mechanical systems and electronic circuits. Suitable for advanced undergraduate and graduate students, this book provides a practical understanding of how the models are used in current natural science and engineering applications. Along with a variety of exercises and solved examples, the text presents all the fundamental concepts and mathematical skills needed to build models and perform analyses.
Integrodifference Equations in Spatial Ecology by Frithjof Lutscher Pdf
This book is the first thorough introduction to and comprehensive treatment of the theory and applications of integrodifference equations in spatial ecology. Integrodifference equations are discrete-time continuous-space dynamical systems describing the spatio-temporal dynamics of one or more populations. The book contains step-by-step model construction, explicitly solvable models, abstract theory and numerical recipes for integrodifference equations. The theory in the book is motivated and illustrated by many examples from conservation biology, biological invasions, pattern formation and other areas. In this way, the book conveys the more general message that bringing mathematical approaches and ecological questions together can generate novel insights into applications and fruitful challenges that spur future theoretical developments. The book is suitable for graduate students and experienced researchers in mathematical ecology alike.