The Eggplant Genome

Author : Mark A. Chapman
Publisher : Springer
Page : 220 pages
File Size : 50,5 Mb
Release : 2019-05-30
Category : Science
ISBN : 9783319992082

Get Book

The Eggplant Genome by Mark A. Chapman Pdf

The book discusses the importance of eggplant (Solanum melongena L.) as a crop, highlighting the potential for eggplant to serve as a model for understanding several evolutionary and taxonomic questions. It also explores the genomic make-up, in particular in comparison to other Solanaceous crops, and examines the parallels between eggplant and tomato domestication as well as between the most common eggplant species and two related eggplants native to Africa (Ethiopian eggplant [Solanum aethiopicum L.] and African eggplant [Solanum macrocarpon L.]). The eggplant genome was first sequenced in 2014, and an improved version was due to be released in 2017. Further investigations have revealed the relationships between wild species, domesticated eggplant, and feral weedy eggplant (derived from the domesticate), as well as targets of selection during domestication. Parallels between eggplant and tomato domestication loci are well known and the molecular basis is currently being investigated. Eggplant is a source of nutrition for millions of people worldwide, especially in Southeast Asia where it is a staple food source. Domesticated in the old world, in contrast to its congeners tomato and potato, the eggplant is morphologically and nutritionally diverse. The spread of wild eggplants from Africa is particularly interesting from a cultural point of view. This book brings together diverse fields of research, from bioinformatics to taxonomy to nutrition to allow readers to fully understand eggplant’s importance and potential.

Author : Mark A. Chapman
Publisher : Unknown
Page : 128 pages
File Size : 55,7 Mb
Release : 2019
Category : Eggplant
ISBN : 3319992090

Get Book

The Eggplant Genome by Mark A. Chapman Pdf

The book discusses the importance of eggplant (Solanum melongena L.) as a crop, highlighting the potential for eggplant to serve as a model for understanding several evolutionary and taxonomic questions. It also explores the genomic make-up, in particular in comparison to other Solanaceous crops, and examines the parallels between eggplant and tomato domestication as well as between the most common eggplant species and two related eggplants native to Africa (Ethiopian eggplant [Solanum aethiopicum L.] and African eggplant [Solanum macrocarpon L.]). The eggplant genome was first sequenced in 2014, and an improved version was due to be released in 2017. Further investigations have revealed the relationships between wild species, domesticated eggplant, and feral weedy eggplant (derived from the domesticate), as well as targets of selection during domestication. Parallels between eggplant and tomato domestication loci are well known and the molecular basis is currently being investigated. Eggplant is a source of nutrition for millions of people worldwide, especially in Southeast Asia where it is a staple food source. Domesticated in the old world, in contrast to its congeners tomato and potato, the eggplant is morphologically and nutritionally diverse. The spread of wild eggplants from Africa is particularly interesting from a cultural point of view. This book brings together diverse fields of research, from bioinformatics to taxonomy to nutrition to allow readers to fully understand eggplant's importance and potential.

Author : Byoung-Cheorl Kang,Chittaranjan Kole
Publisher : CRC Press
Page : 180 pages
File Size : 54,7 Mb
Release : 2013-01-23
Category : Science
ISBN : 9781466577466

Get Book

Genetics, Genomics and Breeding of Peppers and Eggplants by Byoung-Cheorl Kang,Chittaranjan Kole Pdf

Peppers and eggplants are two leading vegetable crops produced and consumed worldwide. To facilitate the breeding for agronomical traits such as disease resistance and quality, diverse molecular genetic studies have been carried out. Recent achievements on pepper genome sequencing and trait-linked marker development have enabled the cloning of gene

Author : Domenico Carputo,Riccardo Aversano,Maria Raffaella Ercolano
Publisher : Springer Nature
Page : 250 pages
File Size : 44,9 Mb
Release : 2021-09-21
Category : Science
ISBN : 9783030303433

Get Book

The Wild Solanums Genomes by Domenico Carputo,Riccardo Aversano,Maria Raffaella Ercolano Pdf

This book gathers the latest information on the organization of genomes in wild Solanum species and emphasizes how this information is yielding direct outcomes in the fields of molecular breeding, as well as a better understanding of both the patterns and processes of evolution. Cultivated Solanums, such as potato, tomato, and pepper, possess a high number of wild relatives that are of great importance for practical breeding and evolutionary studies. Their germplasm is often characterized by allelic diversity, as well as genes that are lacking in the cultivated species. Wild Solanums have not been fully exploited by breeders. This is mainly due to the lack of information regarding their genetics and genomics. However, the genome of important cultivated Solanaceae such as potato, tomato, eggplant, and pepper has already been sequenced. On the heels of these recent developments, wild Solanum genomes are now becoming available, opening an exciting new era for both basic research and varietal development in the Solanaceae.

Author : Chittaranjan Kole
Publisher : Springer Science & Business Media
Page : 341 pages
File Size : 46,5 Mb
Release : 2011-02-24
Category : Science
ISBN : 9783642143878

Get Book

Wild Crop Relatives: Genomic and Breeding Resources by Chittaranjan Kole Pdf

Wild crop relatives are now playing a significant part in the elucidation and improvement of the genomes of their cultivated counterparts. This work includes comprehensive examinations of the status, origin, distribution, morphology, cytology, genetic diversity and available genetic and genomic resources of numerous wild crop relatives, as well as of their evolution and phylogenetic relationship. Further topics include their role as model plants, genetic erosion and conservation efforts, and their domestication for the purposes of bioenergy, phytomedicines, nutraceuticals and phytoremediation. Wild Crop Relatives: Genomic and Breeding Resources comprises 10 volumes on Cereals, Millets and Grasses, Oilseeds, Legume Crops and Forages, Vegetables, Temperate Fruits, Tropical and Subtropical Fruits, Industrial Crops, Plantation and Ornamental Crops, and Forest Trees. It contains 125 chapters written by nearly 400 well-known authors from about 40 countries.

Author : Byoung-Cheorl Kang,Chittaranjan Kole
Publisher : CRC Press
Page : 184 pages
File Size : 49,7 Mb
Release : 2013-01-23
Category : Science
ISBN : 9781466577459

Get Book

Genetics, Genomics and Breeding of Peppers and Eggplants by Byoung-Cheorl Kang,Chittaranjan Kole Pdf

Peppers and eggplants are two leading vegetable crops produced and consumed worldwide. To facilitate the breeding for agronomical traits such as disease resistance and quality, diverse molecular genetic studies have been carried out. Recent achievements on pepper genome sequencing and trait-linked marker development have enabled the cloning of genes involved in useful traits. This book explores the agronomical and evolutionary characteristics of peppers and eggplants and the results of molecular genetic studies. Topics include molecular linkage maps and candidate gene approaches in capsicum and the structure of the pepper genome.

Author : Mathilde Causse,Jim Giovannoni,Mondher Bouzayen,Mohamed Zouine
Publisher : Springer
Page : 259 pages
File Size : 49,6 Mb
Release : 2016-11-21
Category : Science
ISBN : 9783662533895

Get Book

The Tomato Genome by Mathilde Causse,Jim Giovannoni,Mondher Bouzayen,Mohamed Zouine Pdf

This book describes the strategy used for sequencing, assembling and annotating the tomato genome and presents the main characteristics of this sequence with a special focus on repeated sequences and the ancestral polyploidy events. It also includes the chloroplast and mitochondrial genomes. Tomato (Solanum lycopersicum) is a major crop plant as well as a model for fruit development, and the availability of the genome sequence has completely changed the paradigm of the species’ genetics and genomics. The book describes the numerous genetic and genomic resources available, the identified genes and quantitative trait locus (QTL) identified, as well as the strong synteny across Solanaceae species. Lastly, it discusses the consequences of the availability of a high-quality genome sequence of the cultivated species for the research community. It is a valuable resource for students and researchers interested in the genetics and genomics of tomato and Solanaceae.

Author : Chittaranjan Kole
Publisher : Springer Nature
Page : 392 pages
File Size : 51,5 Mb
Release : 2022-07-02
Category : Science
ISBN : 9783030977856

Get Book

Genomic Designing for Biotic Stress Resistant Vegetable Crops by Chittaranjan Kole Pdf

Biotic stresses cause yield loss of 31-42% in crops in addition to 6-20% during post-harvest stage. Understanding interaction of crop plants to the biotic stresses caused by insects, bacteria, fungi, viruses, and oomycetes, etc. is important to develop resistant crop varieties. Knowledge on the advanced genetic and genomic crop improvement strategies including molecular breeding, transgenics, genomics-assisted breeding and the recently emerging genome editing for developing resistant varieties in vegetable crops is imperative for addressing FPNEE (food, health, nutrition. energy and environment) security. Whole genome sequencing of these crops followed by genotyping-by-sequencing have facilitated precise information about the genes conferring resistance useful for gene discovery, allele mining and shuttle breeding which in turn opened up the scope for 'designing' crop genomes with resistance to biotic stresses. The nine chapters each dedicated to a vegetable crop or crop-group in this volume will deliberate on different types of biotic stress agents and their effects on and interaction with crop plants; will enumerate on the available genetic diversity with regard to biotic stress resistance among available cultivars; illuminate on the potential gene pools for utilization in interspecific gene transfer; will brief on the classical genetics of stress resistance and traditional breeding for transferring them to their cultivated counterparts; will enunciate the success stories of genetic engineering for developing biotic stress resistant varieties; will discuss on molecular mapping of genes and QTLs underlying biotic stress resistance and their marker-assisted introgression into elite varieties; will enunciate on different emerging genomics-aided techniques including genomic selection, allele mining, gene discovery and gene pyramiding for developing resistant crop varieties with higher quantity and better quality; and will also elaborate some case studies on genome editing focusing on specific genes for generating disease and insect resistant crops.

Author : Swarup Kumar Chakrabarti,Conghua Xie,Jagesh Kumar Tiwari
Publisher : Springer
Page : 326 pages
File Size : 47,7 Mb
Release : 2017-12-26
Category : Science
ISBN : 9783319661353

Get Book

The Potato Genome by Swarup Kumar Chakrabarti,Conghua Xie,Jagesh Kumar Tiwari Pdf

This book describes the historical importance of potato (Solanum tuberosum L.),potato genetic resources and stocks (including S. tuberosum group Phureja DM1-3 516 R44, a unique doubled monoploid homozygous line) used for potato genome sequencing. It also discusses strategies and tools for high-throughput sequencing, sequence assembly, annotation, analysis, repetitive sequences and genotyping-by-sequencing approaches. Potato (Solanum tuberosum L.; 2n = 4x = 48) is the fourth most important food crop of the world after rice, wheat and maize and holds great potential to ensure both food and nutritional security. It is an autotetraploid crop with complex genetics, acute inbreeding depression and a highly heterozygous nature. Further, the book examines the recent discovery of whole genome sequencing of a few wild potato species genomes, genomics in management and genetic enhancement of Solanum species, new strategies towards durable potato late blight resistance, structural analysis of resistance genes, genomics resources for abiotic stress management, as well as somatic cell genetics and modern approaches in true-potato-seed technology. The complete genome sequence provides a better understanding of potato biology, underpinning evolutionary process, genetics, breeding and molecular efforts to improve various important traits involved in potato growth and development.

Author : Chittaranjan Kole
Publisher : Springer Nature
Page : 340 pages
File Size : 48,7 Mb
Release : 2022-08-21
Category : Science
ISBN : 9783031039645

Get Book

Genomic Designing for Abiotic Stress Resistant Vegetable Crops by Chittaranjan Kole Pdf

This book presents deliberations on molecular and genomic mechanisms underlying the interactions of crop plants to the abiotic stresses caused by heat, cold, drought, flooding, submergence, salinity, acidity, etc., important to develop resistant crop varieties. Knowledge on the advanced genetic and genomic crop improvement strategies including molecular breeding, transgenics, genomic-assisted breeding, and the recently emerging genome editing for developing resistant varieties in vegetable crops is imperative for addressing FHNEE (food, health, nutrition, energy, and environment) security. Whole genome sequencing of these crops followed by genotyping-by-sequencing has provided precise information regarding the genes conferring resistance useful for gene discovery, allele mining, and shuttle breeding which in turn opened up the scope for 'designing' crop genomes with resistance to abiotic stresses. The nine chapters each dedicated to a vegetable crop or crop group in this volume elucidate on different types of abiotic stresses and their effects on and interaction with the crop; enumerate on the available genetic diversity with regard to abiotic stress resistance among available cultivars; illuminate on the potential gene pools for utilization in interspecific gene transfer; present brief on classical genetics of stress resistance and traditional breeding for transferring them to their cultivated counterparts; depict the success stories of genetic engineering for developing abiotic stress-resistant crop varieties; discuss on molecular mapping of genes and QTLs underlying stress resistance and their marker-assisted introgression into elite varieties; enunciate on different genomics-aided techniques including genomic selection, allele mining, gene discovery, and gene pyramiding for developing adaptive crop varieties with higher quantity and quality of yields, and also elaborate some case studies on genome editing focusing on specific genes for generating abiotic stress-resistant crops

Author : Siddharth Tiwari,Bhupendra Koul
Publisher : Springer Nature
Page : 465 pages
File Size : 45,7 Mb
Release : 2024-01-05
Category : Technology & Engineering
ISBN : 9789819950348

Get Book

Genetic Engineering of Crop Plants for Food and Health Security by Siddharth Tiwari,Bhupendra Koul Pdf

This edited book support Sustainable Development Goal 2 (SDG 2): Zero Hunger. This book summarizes the contribution of genetic engineering for sustainable crop improvement toward global food and health security, climate resilience and economic growth. The book acts as a compendium of research reports on recent developments in the arena of cisgenics or transgenics or genome editing of crop plants for tolerance to biotic or abiotic stresses, introgression of value-added traits, molecular pharming etc. Sustainable crop productivity, yield and nutrition are the major constrain for food and nutritional security for the human population especially, in developing countries where arable land per capita is shrinking while the human population is steadily increasing. Zero hunger and achieving food security is the top priority of the United Nations development goals. This book explains various methods of genetic transformation such as transgenic, cisgenic, and genome editing for crop improvement. It also encompasses the advantages of genetic engineering in plants and their scope for sustainable crop improvement. The importance, limitations, challenges, GM biosafety regulations, recent advancements and future prospects of GM crops are covered in various chapters. This book is of interest to teachers, researchers, plant tissue culturists, GM crop experts, research scholars, academicians, plant breeders, policymakers etc. Also, the book serves as additional reading material for undergraduate and graduate students of agriculture, forestry, ecology, soil science, and environmental sciences. National and international agricultural scientists and policymakers will also find this to be a useful read.

Author : Ezio Portis,Alberto Acquadro,Sergio Lanteri
Publisher : Springer
Page : 233 pages
File Size : 40,9 Mb
Release : 2019-06-08
Category : Science
ISBN : 9783030200121

Get Book

The Globe Artichoke Genome by Ezio Portis,Alberto Acquadro,Sergio Lanteri Pdf

This book presents the latest information on the genetics and genomics of the globe artichoke. It focuses on the latest findings, tools and strategies employed in genome sequencing, physical map development and QTL analyses, as well as genomic resources. The re-sequencing of four globe artichoke genotypes, representative of the core varietal types in cultivation, as well as the genotype of cultivated cardoon, has recently been completed. Here, the five genomes are reconstructed at the chromosome scale and annotated. Moreover, functional SNP analyses highlight numerous genetic variants, which represent key tools for dissecting the path from sequence variation to phenotype, as well as for designing effective diagnostic markers. The wealth of information provided here offers a valuable asset for scientists, plant breeders and students alike.

Author : Mark A. Chapman
Publisher : Springer Nature
Page : 460 pages
File Size : 40,5 Mb
Release : 2022-11-03
Category : Science
ISBN : 9783031008481

Get Book

Underutilised Crop Genomes by Mark A. Chapman Pdf

This book highlights the uses for underutilized crops, presenting the state-of-the-art in terms of genome sequencing for over 30 crops, previously understudied and under-researched. In a changing climate and with significant pressure on the land, it is the ideal time to be discussing novel crops, with significant biotic and abiotic tolerances and/or rich nutrient profiles for consumers. Previously, the only species with sequenced genomes were high-profile internationally recognized crops, but in the current era genomes are being sequenced for dozens of crops, including those previously classified as underutilized, now being investigated. This book covers food crops, from fruits to tubers, and from grasses to legumes, as well as crops with non-food applications. Some of these crops have draft genomes, and others have polished genomes with extensive resequencing panels. Each chapter tells the story of an individual crop or crop group, written by experts, focusing on the genome data available, revealing more about crop domestication and genetic variation, and the current and future prospects given that this data is now becoming available. It also highlights how even small sequencing projects can provide draft genome sequences suitable for gene discovery, comparative genomics, and identification of molecular markers for understanding these crops further.

Author : Chittaranjan Kole
Publisher : Springer Nature
Page : 1630 pages
File Size : 47,6 Mb
Release : 2024-01-15
Category : Technology & Engineering
ISBN : 9789811941696

Get Book

Compendium of Crop Genome Designing for Nutraceuticals by Chittaranjan Kole Pdf

The crop plants cater not only to our basic F5 (food, feed, fiber, fuel, and furniture) needs but also provide a number of nutraceuticals with potential nutritional, safety and therapeutic properties. Many crop plants provide an array of minerals, vitamins, and antioxidant-rich bioactive phytochemicals. Increasing incidences of chronic diseases such as cancer, diabetes and HIV, and malnutrition necessitate global attention to health and nutrition security with equal emphasis to food security. This compendium compiles results of researches on biochemical, physiological and genetic mechanisms underlying biosynthesis of the health and nutrition related nutraceuticals. It also explores the precise breeding strategies for augmentation of their content and amelioration of their quality in crop plants under all commodity categories including cereals and millets, oilseeds, pulses, fruits and nuts, and vegetables. The compendium comprise 5 sections dedicated to these 5 commodity groups and presents enumeration on the concepts, strategies, tools and techniques of nutraceutomics. These sections include 50 chapters devoted to even number of major crop plants. These chapters present deliberations on the biochemistry and medicinal properties of the nutracuticals contained; genetic variation in their contents; classical genetics and breeding for their quantitative and qualitative improvement; tissue culture and genetic engineering for augmentation of productivity and quality; and sources of genes underlying their biosynthesis. They also include comprehensive enumeration on genetic mapping of the genes and QTLs controlling the contents and profile of the nutraceuticals and molecular breeding for their further improvement through marker assisted selection and backcross breeding tools. Prospects of post-genomic precise breeding strategies including genome-wide association mapping, genomic selection, allele mining, and genome editing are also discussed. This compendium fills the gap in academia, and research and development wings of the private sector industries interested in an array of subjects including genetics, genomics, tissue culture, genetic engineering, molecular breeding, genomics-assisted breeding, bioinformatics, biochemistry, physiology, pathology, entomology, pharmacognosy, IPR, etc., and will also facilitate understanding of the policy making agencies and people in the socio-economic domain and research sponsoring agencies.

Author : Yin Li,Chuang Ma,Ray Ming,Wenqin Wang
Publisher : Frontiers Media SA
Page : 218 pages
File Size : 41,9 Mb
Release : 2021-06-24
Category : Science
ISBN : 9782889668939

Get Book

Genomics-Enabled Crop Genetics by Yin Li,Chuang Ma,Ray Ming,Wenqin Wang Pdf