Exact Design Of Digital Microfluidic Biochips

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Exact Design of Digital Microfluidic Biochips

Oliver Keszocze,Robert Wille,Rolf Drechsler
Exact Design of Digital Microfluidic Biochips Book PDF

Author : Oliver Keszocze,Robert Wille,Rolf Drechsler
Publisher : Springer
Page : 134 pages
File Size : 48,7 Mb
Release : 2018-06-11
Category : Technology & Engineering
ISBN : 9783319909363

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Exact Design of Digital Microfluidic Biochips by Oliver Keszocze,Robert Wille,Rolf Drechsler Pdf

This book presents exact, that is minimal, solutions to individual steps in the design process for Digital Microfluidic Biochips (DMFBs), as well as a one-pass approach that combines all these steps in a single process. All of the approaches discussed are based on a formal model that can easily be extended to cope with further design problems. In addition to the exact methods, heuristic approaches are provided and the complexity classes of various design problems are determined. Presents exact methods to tackle a variety of design problems for Digital Microfluidic Biochips (DMFBs); Describes an holistic, one-pass approach solving different design steps all at once; Based on a formal model of DMFBs that is easily adaptable to deal with further design tasks.

Design and Testing of Digital Microfluidic Biochips

Yang Zhao,Krishnendu Chakrabarty
Design and Testing of Digital Microfluidic Biochips Book PDF

Author : Yang Zhao,Krishnendu Chakrabarty
Publisher : Springer Science & Business Media
Page : 207 pages
File Size : 45,5 Mb
Release : 2012-07-25
Category : Technology & Engineering
ISBN : 9781461403708

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Design and Testing of Digital Microfluidic Biochips by Yang Zhao,Krishnendu Chakrabarty Pdf

This book provides a comprehensive methodology for automated design, test and diagnosis, and use of robust, low-cost, and manufacturable digital microfluidic systems. It focuses on the development of a comprehensive CAD optimization framework for digital microfluidic biochips that unifies different design problems. With the increase in system complexity and integration levels, biochip designers can utilize the design methods described in this book to evaluate different design alternatives, and carry out design-space exploration to obtain the best design point.

Design and Testing of Digital Microfluidic Biochips

Krishnendu Chakrabarty,Springer
Design and Testing of Digital Microfluidic Biochips Book PDF

Author : Krishnendu Chakrabarty,Springer
Publisher : Unknown
Page : 216 pages
File Size : 55,6 Mb
Release : 2012-08-31
Category : Electronic
ISBN : 1461403715

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Design and Testing of Digital Microfluidic Biochips by Krishnendu Chakrabarty,Springer Pdf

This book provides a comprehensive methodology for automated design, test and diagnosis, and use of robust, low-cost, and manufacturable digital microfluidic systems. It focuses on the development of a comprehensive CAD optimization framework for digital microfluidic biochips that unifies different design problems. With the increase in system complexity and integration levels, biochip designers can utilize the design methods described in this book to evaluate different design alternatives, and carry out design-space exploration to obtain the best design point.

Digital Microfluidic Biochips

Krishnendu Chakrabarty,Fei Su
Digital Microfluidic Biochips Book PDF

Author : Krishnendu Chakrabarty,Fei Su
Publisher : CRC Press
Page : 228 pages
File Size : 46,8 Mb
Release : 2018-10-03
Category : Technology & Engineering
ISBN : 9781420008302

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Digital Microfluidic Biochips by Krishnendu Chakrabarty,Fei Su Pdf

Digital Microfluidic Biochips focuses on the automated design and production of microfluidic-based biochips for large-scale bioassays and safety-critical applications. Bridging areas of electronic design automation with microfluidic biochip research, the authors present a system-level design automation framework that addresses key issues in the design, analysis, and testing of digital microfluidic biochips. The book describes a new generation of microfluidic biochips with more complex designs that offer dynamic reconfigurability, system scalability, system integration, and defect tolerance. Part I describes a unified design methodology that targets design optimization under resource constraints. Part II investigates cost-effective testing techniques for digital microfluidic biochips that include test resource optimization and fault detection while running normal bioassays. Part III focuses on different reconfiguration-based defect tolerance techniques designed to increase the yield and dependability of digital microfluidic biochips. Expanding upon results from ongoing research on CAD for biochips at Duke University, this book presents new design methodologies that address some of the limitations in current full-custom design techniques. Digital Microfluidic Biochips is an essential resource for achieving the integration of microfluidic components in the next generation of system-on-chip and system-in-package designs.

Digital Microfluidic Biochips

Krishnendu Chakrabarty,Tao Xu
Digital Microfluidic Biochips Book PDF

Author : Krishnendu Chakrabarty,Tao Xu
Publisher : CRC Press
Page : 377 pages
File Size : 48,5 Mb
Release : 2010-05-03
Category : Medical
ISBN : 9781439858738

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Digital Microfluidic Biochips by Krishnendu Chakrabarty,Tao Xu Pdf

Microfluidics-based biochips combine electronics with biochemistry, providing access to new application areas in a wide variety of fields. Continued technological innovations are essential to assuring the future role of these chips in functional diversification in biotech, pharmaceuticals, and other industries.Revolutionary guidance on design, opti

Micro-Electrode-Dot-Array Digital Microfluidic Biochips

Zipeng Li,Krishnendu Chakrabarty,Tsung-Yi Ho,Chen-Yi Lee
Micro Electrode Dot Array Digital Microfluidic Biochips Book PDF

Author : Zipeng Li,Krishnendu Chakrabarty,Tsung-Yi Ho,Chen-Yi Lee
Publisher : Springer
Page : 144 pages
File Size : 53,8 Mb
Release : 2018-12-14
Category : Technology & Engineering
ISBN : 9783030029647

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Micro-Electrode-Dot-Array Digital Microfluidic Biochips by Zipeng Li,Krishnendu Chakrabarty,Tsung-Yi Ho,Chen-Yi Lee Pdf

This book provides an insightful guide to the design, testing and optimization of micro-electrode-dot-array (MEDA) digital microfluidic biochips. The authors focus on the characteristics specific for MEDA biochips, e.g., real-time sensing and advanced microfluidic operations like lamination mixing and droplet shape morphing. Readers will be enabled to enhance the automated design and use of MEDA and to develop a set of solutions to facilitate the full exploitation of design complexities that are possible with standard CMOS fabrication techniques. The book provides the first set of design automation and test techniques for MEDA biochips. The methods described in this book have been validated using fabricated MEDA biochips in the laboratory. Readers will benefit from an in-depth look at the MEDA platform and how to combine microfluidics with software, e.g., applying biomolecular protocols to software-controlled and cyberphysical microfluidic biochips.

Languages, Design Methods, and Tools for Electronic System Design

Tom J. Kazmierski,Sebastian Steinhorst,Daniel Große
Languages Design Methods and Tools for Electronic System Design Book PDF

Author : Tom J. Kazmierski,Sebastian Steinhorst,Daniel Große
Publisher : Springer Nature
Page : 197 pages
File Size : 54,5 Mb
Release : 2019-12-20
Category : Technology & Engineering
ISBN : 9783030315856

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Languages, Design Methods, and Tools for Electronic System Design by Tom J. Kazmierski,Sebastian Steinhorst,Daniel Große Pdf

This book brings together a selection of the best papers from the twenty-first edition of the Forum on specification and Design Languages Conference (FDL), which took place on September 10-12, 2018, in Munich, Germany. FDL is a well-established international forum devoted to dissemination of research results, practical experiences and new ideas in the application of specification, design and verification languages to the design, modeling and verification of integrated circuits, complex hardware/software embedded systems, and mixed-technology systems. Covers Assertion Based Design, Verification & Debug; Includes language-based modeling and design techniques for embedded systems; Covers design, modeling and verification of mixed physical domain and mixed signal systems that include significant analog parts in electrical and non-electrical domains; Includes formal and semi-formal system level design methods for complex embedded systems based on the Unified Modelling Language (UML) and Model Driven Engineering (MDE).

Fault-Tolerant Digital Microfluidic Biochips

Paul Pop,Mirela Alistar,Elena Stuart,Jan Madsen
Fault Tolerant Digital Microfluidic Biochips Book PDF

Author : Paul Pop,Mirela Alistar,Elena Stuart,Jan Madsen
Publisher : Springer
Page : 234 pages
File Size : 50,8 Mb
Release : 2015-09-07
Category : Technology & Engineering
ISBN : 9783319230726

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Fault-Tolerant Digital Microfluidic Biochips by Paul Pop,Mirela Alistar,Elena Stuart,Jan Madsen Pdf

This book describes for researchers in the fields of compiler technology, design and test, and electronic design automation the new area of digital microfluidic biochips (DMBs), and thus offers a new application area for their methods. The authors present a routing-based model of operation execution, along with several associated compilation approaches, which progressively relax the assumption that operations execute inside fixed rectangular modules. Since operations can experience transient faults during the execution of a bioassay, the authors show how to use both offline (design time) and online (runtime) recovery strategies. The book also presents methods for the synthesis of fault-tolerant application-specific DMB architectures. · Presents the current models used for the research on compilation and synthesis techniques of DMBs in a tutorial fashion; · Includes a set of “benchmarks”, which are presented in great detail and includes the source code of most of the techniques presented, including solutions to the basic compilation and synthesis problems; · Discusses several new research problems in detail, using numerous examples.

Hardware/Software Co-Design and Optimization for Cyberphysical Integration in Digital Microfluidic Biochips

Yan Luo,Krishnendu Chakrabarty,Tsung-Yi Ho
Hardware Software Co Design and Optimization for Cyberphysical Integration in Digital Microfluidic Biochips Book PDF

Author : Yan Luo,Krishnendu Chakrabarty,Tsung-Yi Ho
Publisher : Springer
Page : 197 pages
File Size : 55,9 Mb
Release : 2014-08-06
Category : Technology & Engineering
ISBN : 9783319090061

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Hardware/Software Co-Design and Optimization for Cyberphysical Integration in Digital Microfluidic Biochips by Yan Luo,Krishnendu Chakrabarty,Tsung-Yi Ho Pdf

This book describes a comprehensive framework for hardware/software co-design, optimization, and use of robust, low-cost, and cyberphysical digital microfluidic systems. Readers with a background in electronic design automation will find this book to be a valuable reference for leveraging conventional VLSI CAD techniques for emerging technologies, e.g., biochips or bioMEMS. Readers from the circuit/system design community will benefit from methods presented to extend design and testing techniques from microelectronics to mixed-technology microsystems. For readers from the microfluidics domain, this book presents a new design and development strategy for cyberphysical microfluidics-based biochips suitable for large-scale bioassay applications. • Takes a transformative, “cyberphysical” approach towards achieving closed-loop and sensor feedback-driven biochip operation under program control; • Presents a “physically-aware” system reconfiguration technique that uses sensor data at intermediate checkpoints to dynamically reconfigure biochips; • Enables readers to simplify the structure of biochips, while facilitating the “general-purpose” use of digital microfluidic biochips for a wider range of applications.

Applied Computing for Software and Smart Systems

Rituparna Chaki,Nabendu Chaki,Agostino Cortesi,Khalid Saeed
Applied Computing for Software and Smart Systems Book PDF

Author : Rituparna Chaki,Nabendu Chaki,Agostino Cortesi,Khalid Saeed
Publisher : Springer Nature
Page : 232 pages
File Size : 41,8 Mb
Release : 2024-01-27
Category : Technology & Engineering
ISBN : 9789819977833

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Applied Computing for Software and Smart Systems by Rituparna Chaki,Nabendu Chaki,Agostino Cortesi,Khalid Saeed Pdf

This book features a collection of high-quality research papers presented at the 10th International Symposium on Applied Computing for Software and Smart systems (ACSS 2023), to be held during September 15–16, 2023, in Kolkata, India. The book presents innovative works by undergraduate, graduate students as well as Ph.D. scholars. The emphasis of the workshop is on software and smart systems and research outcomes on other relevant areas pertaining to advancement of computing.

Designing Droplet Microfluidic Networks

Andreas Grimmer,Robert Wille
Designing Droplet Microfluidic Networks Book PDF

Author : Andreas Grimmer,Robert Wille
Publisher : Springer
Page : 145 pages
File Size : 55,7 Mb
Release : 2019-07-04
Category : Technology & Engineering
ISBN : 9783030207137

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Designing Droplet Microfluidic Networks by Andreas Grimmer,Robert Wille Pdf

This book describes automatic methods for the design of droplet microfluidic networks. The authors discuss simulation and design methods which support the design process of droplet microfluidics in general, as well as design methods for a dedicated droplet routing mechanism, namely passive droplet routing. The methods discussed allow for simulating a microfluidic design on a high-abstraction level, which facilitates early validation of whether a design works as intended, automatically dimensioning a microfluidic design, so that constraints like flow conditions are satisfied, and automatically generating meander designs for the respective needs and fabrication settings. Dedicated methods for passive droplet routing are discussed and allow for designing application-specific architectures for a given set of experiments, as well as generating droplet sequences realizing the respective experiments. Together, these methods provide a comprehensive “toolbox" for designers working on droplet microfluidic networks in general and an integrated design flow for the passive droplet routing mechanism in particular. Provides both a comprehensive “toolbox" for designers working on droplet microfluidic networks in general and an integrated design flow for the passive droplet routing mechanism in particular; Describes for the first time CAD methods for droplet microfluidic networks, along with the first integrated design process; Includes open source implementations, in order to reach the largest possible user group within the domain of microfluidics.

Secure and Trustworthy Cyberphysical Microfluidic Biochips

Jack Tang,Mohamed Ibrahim,Krishnendu Chakrabarty,Ramesh Karri
Secure and Trustworthy Cyberphysical Microfluidic Biochips Book PDF

Author : Jack Tang,Mohamed Ibrahim,Krishnendu Chakrabarty,Ramesh Karri
Publisher : Springer
Page : 144 pages
File Size : 40,8 Mb
Release : 2019-05-28
Category : Technology & Engineering
ISBN : 9783030181635

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Secure and Trustworthy Cyberphysical Microfluidic Biochips by Jack Tang,Mohamed Ibrahim,Krishnendu Chakrabarty,Ramesh Karri Pdf

This book describes novel hardware security and microfluidic biochip design methodologies to protect against tampering attacks in cyberphysical microfluidic biochips (CPMBs). It also provides a general overview of this nascent area of research, which will prove to be a vital resource for practitioners in the field.This book shows how hardware-based countermeasures and design innovations can be a simple and effective last line of defense, demonstrating that it is no longer justifiable to ignore security and trust in the design phase of biochips.

Advanced Logic Synthesis

André Inácio Reis,Rolf Drechsler
Advanced Logic Synthesis Book PDF

Author : André Inácio Reis,Rolf Drechsler
Publisher : Springer
Page : 232 pages
File Size : 52,8 Mb
Release : 2017-11-15
Category : Technology & Engineering
ISBN : 9783319672953

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Advanced Logic Synthesis by André Inácio Reis,Rolf Drechsler Pdf

This book provides a single-source reference to the state-of-the-art in logic synthesis. Readers will benefit from the authors’ expert perspectives on new technologies and logic synthesis, new data structures, big data and logic synthesis, and convergent logic synthesis. The authors describe techniques that will enable readers to take advantage of recent advances in big data techniques and frameworks in order to have better logic synthesis algorithms.

Design Automation Methods and Tools for Microfluidics-Based Biochips

Jun Zeng
Design Automation Methods and Tools for Microfluidics Based Biochips Book PDF

Author : Jun Zeng
Publisher : Springer Science & Business Media
Page : 407 pages
File Size : 50,8 Mb
Release : 2006-11-08
Category : Technology & Engineering
ISBN : 9781402051234

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Design Automation Methods and Tools for Microfluidics-Based Biochips by Jun Zeng Pdf

Design Automation Methods and Tools for Microfluidics-Based Biochips deals with all aspects of design automation for microfluidics-based biochips. Experts have contributed chapters on many aspects of biochip design automation. Topics covered include: device modeling; adaptation of bioassays for on-chip implementations; numerical methods and simulation tools; architectural synthesis, scheduling and binding of assay operations; physical design and module placement; fault modeling and testing; and reconfiguration methods.

Transactions on Computational Science XXXV

Marina L. Gavrilova,C. J. Kenneth Tan,Khalid Saeed,Nabendu Chaki
Transactions on Computational Science XXXV Book PDF

Author : Marina L. Gavrilova,C. J. Kenneth Tan,Khalid Saeed,Nabendu Chaki
Publisher : Springer Nature
Page : 167 pages
File Size : 42,8 Mb
Release : 2020-02-17
Category : Computers
ISBN : 9783662610923

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Transactions on Computational Science XXXV by Marina L. Gavrilova,C. J. Kenneth Tan,Khalid Saeed,Nabendu Chaki Pdf

The LNCS journal Transactions on Computational Science reflects recent developments in the field of Computational Science, conceiving the field not as a mere ancillary science but rather as an innovative approach supporting many other scientific disciplines. The journal focuses on original high-quality research in the realm of computational science in parallel and distributed environments, encompassing the facilitating theoretical foundations and the applications of large-scale computations and massive data processing. It addresses researchers and practitioners in areas ranging from aerospace to biochemistry, from electronics to geosciences, from mathematics to software architecture, presenting verifiable computational methods, findings, and solutions, and enabling industrial users to apply techniques of leading-edge, large-scale, high performance computational methods. This, the 35th issue of the Transactions on Computational Science, focusses on signal processing and security in distributed systems. The topics covered include classification of visual attention levels using microsaccades; analysis of textual content using Eyegaze; automatic car-accident detection and passenger counting; face recognition; secure data fusion in IoT; business compliance using goal models; and microfluidic executions.