Metagenomics Techniques Applications Challenges And Opportunities

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Metagenomics: Techniques, Applications, Challenges and Opportunities

Reena Singh Chopra,Chirag Chopra,Neeta Raj Sharma

Author : Reena Singh Chopra,Chirag Chopra,Neeta Raj Sharma
Publisher : Springer Nature
Page : 225 pages
File Size : 42,8 Mb
Release : 2020-09-08
Category : Science
ISBN : 9789811565298

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Metagenomics: Techniques, Applications, Challenges and Opportunities by Reena Singh Chopra,Chirag Chopra,Neeta Raj Sharma Pdf

This book summarizes the various areas of research in metagenomics and their potential applications in medicine, the environment and biotechnology. The book presents the recent advances in theoretical, methodological and applied aspects of metagenomics and highlights their applications in the fields of environmental microbial forensics, bioremediation, drug-discovery and agriculture. In addition, the book discusses various metagenomics approaches used for understanding the microbial physiology and biochemistry. Lastly the book describes a range of bioinformatics tools and computational methods for metagenomics analysis as well as the functional diversity and dynamics of microbial communities colonizing the human skin.

Metagenomics to Bioremediation

Vineet Kumar,Muhammad Bilal,Sushil Kumar Shahi,Vinod Kumar Garg

Author : Vineet Kumar,Muhammad Bilal,Sushil Kumar Shahi,Vinod Kumar Garg
Publisher : Academic Press
Page : 834 pages
File Size : 51,7 Mb
Release : 2022-08-30
Category : Science
ISBN : 9780323994804

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Metagenomics to Bioremediation by Vineet Kumar,Muhammad Bilal,Sushil Kumar Shahi,Vinod Kumar Garg Pdf

Metagenomics to Bioremediation: Applications, Cutting Edge Tools, and Future Outlook provides detailed insight into metagenomics approaches to bioremediation in a comprehensive manner, thus enabling the analysis of microbial behavior at a community level under different environmental stresses during degradation and detoxification of environmental pollutants. The book summarizes each and all aspects of metagenomics applications to bioremediation, helping readers overcome the lack of updated information on advancement in microbial ecology dealing with pollution abatement. Users will find insight not only on the fundamentals of metagenomics and bioremediation, but also on recent trends and future expectations. This book will appeal to readers from diverse backgrounds in biology, chemistry and life sciences. Reviews recently developed metagenomics approaches/strategies/ technologies to solve five major trends in environmental clean-up, including nutrient removal and resource recovery, organometallic compounds detoxification, energy-saving and production, sustainability and community involvement Compiles authoritative information on recent advances in microbial biotechnological approaches, including the latest descriptions of the relationship between microbes and the environment Describes the knowledge gaps and future directions in the field of bioremediation of environmental contaminants Covers underlying microbial mechanisms with metabolic pathways for degradation and detoxification of emerging organic and inorganic contaminants discharged in environment

The New Science of Metagenomics

National Research Council,Division on Earth and Life Studies,Board on Life Sciences,Committee on Metagenomics: Challenges and Functional Applications

Author : National Research Council,Division on Earth and Life Studies,Board on Life Sciences,Committee on Metagenomics: Challenges and Functional Applications
Publisher : National Academies Press
Page : 170 pages
File Size : 54,9 Mb
Release : 2007-06-24
Category : Science
ISBN : 9780309106764

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The New Science of Metagenomics by National Research Council,Division on Earth and Life Studies,Board on Life Sciences,Committee on Metagenomics: Challenges and Functional Applications Pdf

Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.

Microbial BioTechnology for Sustainable Agriculture Volume 1

Naveen Kumar Arora,Brahim Bouizgarne

Author : Naveen Kumar Arora,Brahim Bouizgarne
Publisher : Springer Nature
Page : 575 pages
File Size : 55,5 Mb
Release : 2022-05-03
Category : Science
ISBN : 9789811648434

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Microbial BioTechnology for Sustainable Agriculture Volume 1 by Naveen Kumar Arora,Brahim Bouizgarne Pdf

This volume explains the recent findings on the mutualistic plant–microbe interactions and how they can be utilized for sustainable agriculture practices including land reclamation. The book covers mainly plant growth promoting microorganisms (PGPMs) including both the symbiotic bacteria and fungi and their role in mobilization of nutrients, providing protection to the crops from phytopathogens and abiotic stresses. PGPMs play important roles in survival and health of the plant. These useful microorganisms provide plants with nutrients, protect them from pathogens and help them combat abiotic stresses. It is important that these mutualistic interactions between plant and soil microbes are well understood so as to develop reliable products in the form of biostimulants and biopesticides, as well as managing biotic and abiotic stresses in crops. Apart from enhancing crop productivity plant–microbe interactions can also perform activities such as reclamation of degraded lands, degradation of pollutants and remediation of saline or marginal lands. This book is of interest to teachers, researchers, plant scientists and microbiologists. Also, the book serves as additional reading material for undergraduate and graduate students of agriculture, microbiology, biotechnology, ecology, soil science and environmental sciences.

Current Developments in Biotechnology and Bioengineering

Swati Joshi,Ashok Pandey,Ranjna Sirohi,Sung Hoon Park

Author : Swati Joshi,Ashok Pandey,Ranjna Sirohi,Sung Hoon Park
Publisher : Elsevier
Page : 526 pages
File Size : 44,8 Mb
Release : 2022-04-29
Category : Technology & Engineering
ISBN : 9780323885126

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Current Developments in Biotechnology and Bioengineering by Swati Joshi,Ashok Pandey,Ranjna Sirohi,Sung Hoon Park Pdf

Designer Microbial Cell Factories: Metabolic Engineering and Applications, the latest release in the Current Developments in Biotechnology and Bioengineering series, provides a detailed overview of the biotechnological approaches and strategies used to generate engineered microbes and to facilitate the acceleration, modulation and diversion of metabolic pathways to get desired output such as production of value-added compound or biodegradation of xenobiotic pollutant. The book also highlights applied aspects of designer microbes in fields as diverse as agriculture, pharmaceuticals and bioremediation. Designer microbes generated through reprogramming the microbial cell factories (MCFs) provide an edge over their natural counterparts in terms of increased molecular diversity and selective chemistry. These bugs are becoming instrumental in several areas, including agriculture, environment and human health. Engineering microbes through directed evolution not only gives freedom from evolutionary constrains but also allow introduction of regulated and foreseeable functions into MCFs. Dedicated to the designing of microbes, covering state-of-the-art technological advancements in the field Includes applications of metabolic engineering in the field of agriculture, bioremediation, value-added products, therapeutics, and more Contains chapters dedicated to innovative approaches surrounding engineered microbial consortia Provides comprehensive details and helps users understand concepts

Omics for Environmental Engineering and Microbiology Systems

Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas

Author : Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas
Publisher : CRC Press
Page : 630 pages
File Size : 41,7 Mb
Release : 2022-11-07
Category : Medical
ISBN : 9781000737240

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Omics for Environmental Engineering and Microbiology Systems by Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas Pdf

Bioremediation using microbes is a sustainable technology for biodegradation of target compounds, and an omics approach gives more clarity on these microbial communities. This book provides insights into the complex behavior of microbial communities and identifies enzymes/metabolites and their degradation pathways. It describes the application of microbes and their derivatives for the bioremediation of potentially toxic and novel compounds. It highlights the existing technologies along with industrial practices and real-life case studies. Features: Includes recent research and development in the areas of omics and microbial bioremediation. Covers the broad environmental pollution control approaches such as metagenomics, metabolomics, fluxomics, bioremediation, and biodegradation of industrial wastes. Reviews metagenomics and waste management, and recycling for environmental cleanup. Describes the metagenomic methodologies and best practices, from sample collection to data analysis for taxonomies. Explores various microbial degradation pathways and detoxification mechanisms for organic and inorganic contaminants of wastewater with their gene expression. This book is aimed at graduate students and researchers in environmental engineering, soil remediation, hazardous waste management, environmental modeling, and wastewater treatment.

Microbial Community Studies in Industrial Wastewater Treatment

Maulin P. Shah

Author : Maulin P. Shah
Publisher : CRC Press
Page : 253 pages
File Size : 49,9 Mb
Release : 2022-12-30
Category : Technology & Engineering
ISBN : 9781000815078

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Microbial Community Studies in Industrial Wastewater Treatment by Maulin P. Shah Pdf

Describes the state-of-the-art techniques and the application of omics tools in wastewater treatment reactors (WWTRs) Includes both the theoretical and practical knowledge on the fundamental roles of microorganisms in WWTRs Discusses environmental microbial community proteomics Covers relating function and community structure of complex microbial systems using neural networks Reviews the economics of wastewater treatment and the development of suitable alternatives in terms of performance and cost effectiveness

Antimicrobial Resistance in Agriculture and its Consequences

Arti Gupta,Ram Prasad

Author : Arti Gupta,Ram Prasad
Publisher : CRC Press
Page : 318 pages
File Size : 48,7 Mb
Release : 2024-02-29
Category : Science
ISBN : 9781003847328

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Antimicrobial Resistance in Agriculture and its Consequences by Arti Gupta,Ram Prasad Pdf

This book offers comprehensive coverage of all manifestations of resistance in combating infectious diseases and explores advances in antimicrobial resistance in agriculture and their applications in the fight against microbes. It discusses and compares biological, biochemical, and structural aspects of resistance and its evolution. This is a comprehensive tool covering all manifestations of antimicrobial resistance and microbial resistance genes. In addition, it also provides a variety of photographs, diagrams, and tables to help illustrate the material. Novel strategies to combat antimicrobial resistance are also described, emphasizing collaborative measures of control. The underlining molecular mechanisms, which depend not only on the microbe but on the specific drug (target) molecule, are highly diverse and are covered in great detail. Students, researchers, scientists, practitioners, academics, computational biologists, stakeholders, and policymakers can benefit from using Antimicrobial Resistance in Agriculture and its Consequences as a resource that addresses microbial biotechnology, microbiology, ethnopharmacology, toxicology, medicinal plant products, and all disciplines related to antimicrobial research. Features of the book: Covers antimicrobial resistance in agriculture with up-to-date research Includes recent references on each plausible antimicrobial resistance in agriculture Details the possible spread of antibiotic resistance bacteria from animals to humans Provides several perspectives in the resistance flux with modern agricultural practices Describes the public health impact of the use of antibiotics in agriculture Presents cutting-edge research on epigenetics, nanotechnology, and emergent antimicrobial technologies Outlines recent laws and regulatory guidelines in the federal agency, responsibility, and authority

Omics Insights in Environmental Bioremediation

Vineet Kumar,Indu Shekhar Thakur

Author : Vineet Kumar,Indu Shekhar Thakur
Publisher : Springer Nature
Page : 706 pages
File Size : 41,7 Mb
Release : 2022-09-26
Category : Science
ISBN : 9789811943201

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Omics Insights in Environmental Bioremediation by Vineet Kumar,Indu Shekhar Thakur Pdf

Environmental pollution emanating from rapid industrialization, population growth, and urbanization has been considered a major problem in recent years that affects biodiversity, ecosystems, and human health by contaminating soil and water. This book brings out a comprehensive collection of information on valuable insights into different cutting-edge omics technologies, such as metagenomics, metatranscriptomics, metaproteomics, and metabolomics, along with advanced next-generation sequencing technologies as well as bioinformatic tools, which led to a better understanding of microbial communities and their adaptability to a wide range of contaminants and underlying their mechanisms in bioremediation and biodegradation of environmental pollutants. In addition, this edited volume provides critical insight into of potent microbial communities endowed with unique functional attributes through their unique metabolism catalyzed by ‘signature’ enzymes and degradation pathways. Step-by-step descriptions are provided of various microbial metabolic pathways of degradation and biotransformation of environmental contaminants by numerous illustrations which make the information easier to understand for the readers. Each chapter is devoted to selected examples of microbial bioremediation supported by tables, and an extensive list of references for readers interested in learning further details about the subject matter. This book is of interest to teachers, researchers to professionals, policymakers, stockholders, practitioners, environmental engineers, soil scientists, and policymakers. In addition, the book serves as additional comprehensive material for undergraduate, graduate, and doctoral students who require a working knowledge and knowhow of ‘Omics’ involved in and required for environmental remediation of legacy and emerging contaminants, will also find this to be a useful read.

Pesticides Bioremediation

Sazada Siddiqui,Mukesh Kumar Meghvansi,Kamal Kishore Chaudhary

Author : Sazada Siddiqui,Mukesh Kumar Meghvansi,Kamal Kishore Chaudhary
Publisher : Springer Nature
Page : 537 pages
File Size : 42,8 Mb
Release : 2022-06-08
Category : Science
ISBN : 9783030970000

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Pesticides Bioremediation by Sazada Siddiqui,Mukesh Kumar Meghvansi,Kamal Kishore Chaudhary Pdf

This volume offers the latest theory, procedures, techniques and applications pertaining to the bioremediation of pesticides, as well as current case studies. The book is composed of chapters written by global experts and is divided into three topical sections. Section A deals with concepts and mechanisms of pesticides bioremediation; Section B examines latest tools and techniques; Section C offers global case studies of pesticides bioremediation. The novel methods described here are timely, as traditional pesticide usage leads to high wastage via decay, vaporization and seepage. This of course leads to environmental contamination and has necessitated the development and use of novel technologies like bioremediation for minimizing the impact of pesticides on the environment. This volume will be of relevance to academics, researchers and students who are working in the realm of pesticide bioremediation, and will enable policy makers and managerial experts across the globe in drafting policies and strategies for the management and treatment of pesticides.

Metagenomics and Microbial Ecology

Surajit De Mandal,Amrita Kumari Panda,N. Senthil Kumar,Satpal Singh Bisht,Fengliang Jin

Author : Surajit De Mandal,Amrita Kumari Panda,N. Senthil Kumar,Satpal Singh Bisht,Fengliang Jin
Publisher : CRC Press
Page : 266 pages
File Size : 55,7 Mb
Release : 2021-11-29
Category : Nature
ISBN : 9781000482232

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Metagenomics and Microbial Ecology by Surajit De Mandal,Amrita Kumari Panda,N. Senthil Kumar,Satpal Singh Bisht,Fengliang Jin Pdf

Microorganisms comprise the greatest genetic diversity in the natural ecosystem, and characterization of these microbes is an essential step towards discovering novel products or understanding complex biological mechanisms. The advancement of metagenomics coupled with the introduction of high-throughput, cost-effective NGS technology has expanded the possibilities of microbial research in various biological systems. In addition to traditional culture and biochemical characteristics, omics approaches (metagenomics, metaproteomics, and metatranscriptomics) are useful for analyzing complete microbial communities and their functional attributes in various environments. Metagenomics and Microbial Ecology: Techniques and Applications explores the most recent advances in metagenomics research in the landscape of next-generation sequencing technologies. This book also describes how advances in sequencing technologies are used to study invisible microbes as well as the relationships between microorganisms in their respective environments. Features: Covers a wide range of concepts, investigations, and technological advancement in metagenomics at the global level. Highlights the novel and recent approaches to analyze microbial diversity and its functional attributes. Features a range of chapters that present an introduction to the field and functional insight into various ecosystems.

Advances in Plant Microbiome Research for Climate-Resilient Agriculture

Ashwani Kumar

Author : Ashwani Kumar
Publisher : CRC Press
Page : 302 pages
File Size : 54,5 Mb
Release : 2024-08-07
Category : Science
ISBN : 9781040098530

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Advances in Plant Microbiome Research for Climate-Resilient Agriculture by Ashwani Kumar Pdf

This new book, Advances in Plant Microbiome Research for Climate-Resilient Agriculture: Toward Sustainable Farming, covers important aspects of plant microbiome research through contributions from scientists with the latest information available in this area of research. The book provides an introduction to the concept of plant microbiome and its importance for climate-resistant crop plants and discusses the tools and techniques to analyze plant microbiome for sustainable agriculture productivity. It covers microbial endophytes as warriors for plant defense against abiotic and biotic stress. The book also highlights the importance of phyto-microbiomes and presents an overview of the role of metabolomics in bioremediation for sustainable crop production, introducing various metabolomics tools such as GC-MS, LC-MS, and NMR for the sustainable remediation of toxic pollutants from the environment. Web sources and software for metabolomics data interpretation are included as well. The book discusses abiotic and biotic stresses and their effects on crops, the concept and strategies of the rhizosphere microbiome manipulation in crop improvement, the microbial traits in plant stress tolerance and their importance for agriculture, exogenous applications of several compounds and phyto-microbiomes that mitigate the negative effects of salt stress on maize, and the beneficial plant microbial association for sustainable agriculture. With its coverage of the recent research on the current methods and technological advancements for increasing plant resilience to adverse climate scenarios, this volume will be a rich resource for botanists, plant specialists, and researchers concerned with crop science, plant physiology, and plant protection.

Molecular Advances in Insect Resistance of Field Crops

Amarjit S Tanda

Author : Amarjit S Tanda
Publisher : Springer Nature
Page : 432 pages
File Size : 51,7 Mb
Release : 2022-05-03
Category : Technology & Engineering
ISBN : 9783030921521

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Molecular Advances in Insect Resistance of Field Crops by Amarjit S Tanda Pdf

Based on the understanding that tolerance to pest pressure increases with less crop stress, this book covers all aspects of the molecular mechanisms underlying insect resistance in field crops. Detailed descriptions, accompanied by numerous photographs and schematic drawings, are available for “hot topics” such as genetically engineered crops, crispr/cas9 system, insect pest resistance technology, host plant resistance, and other major breakthroughs. Specific case studies include, but not limit to, the use of insect resistant cultivars in IPMT programs, utilization of glucosinolate-myrosinase processes in oilseed crops, and role of genetic in rice breeding technology.

Metagenomics

Wael N. Hozzein

Author : Wael N. Hozzein
Publisher : BoD – Books on Demand
Page : 164 pages
File Size : 54,5 Mb
Release : 2020-03-25
Category : Science
ISBN : 9781838800550

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Metagenomics by Wael N. Hozzein Pdf

This book is for the students starting their research projects in the field of metagenomics, for researchers interested in the new developments and applications in this field; and for teachers involved in teaching this subject. The book is divided into three sections as indicated from its title, namely; the basics of metagenomics, metagenomic analysis, and applications of metagenomics. It covers the basics of metagenomics from its history and background, to the analysis of metagenomic data as well as its recent applications in different fields. The book contains excellent texts at both the introductory and advanced levels, that describe the latest metagenomic approaches and applications, from sampling to data analysis for taxonomic, environmental, and medical studies. Finally, the publication of this book was an interesting journey for me and I hope the readers will enjoy reading it.

Metagenomics

Muniyandi Nagarajan

Author : Muniyandi Nagarajan
Publisher : Academic Press
Page : 398 pages
File Size : 51,8 Mb
Release : 2017-11-06
Category : Medical
ISBN : 9780128134030

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Metagenomics by Muniyandi Nagarajan Pdf

Metagenomics: Perspectives, Methods, and Applications provides thorough coverage of the growing field of metagenomics. A diverse range of chapters from international experts offer an introduction to the field and examine methods for metagenomic analysis of microbiota, metagenomic computational tools, and recent metagenomic studies in various environments. The emphasis on application makes this text particularly useful for applied researchers, practitioners, clinicians and students seeking to employ metagenomic approaches to advance knowledge in the biomedical and life sciences. Case-study based application chapters examine topics ranging from viral metagenome profiling, metagenomics in oral disease and health, metagenomic insights into the human gut microbiome and metabolic syndromes, and more. Additionally, perspectives on future potential at the end of each chapter provoke new thought and motivations for continued study in this exciting and fruitful research area. Provides thorough coverage of the rapidly growing field of metagenomics, with an emphasis on applications of relevance to translational researchers, practitioners, clinicians and students Features a diverse range of chapters from international experts that offer an introduction to the field and examine methods for metagenomic analysis of microbiota, metagenomic computational tools and research pipelines Highlights perspectives on future potential at the end of each chapter to provoke new thought and motivations for continued study in this exciting and fruitful research area

Metagenomics Techniques Applications Challenges And Opportunities

Metagenomics: Techniques, Applications, Challenges and Opportunities by Reena Singh Chopra,Chirag Chopra,Neeta Raj Sharma Pdf

Metagenomics to Bioremediation by Vineet Kumar,Muhammad Bilal,Sushil Kumar Shahi,Vinod Kumar Garg Pdf

The New Science of Metagenomics by National Research Council,Division on Earth and Life Studies,Board on Life Sciences,Committee on Metagenomics: Challenges and Functional Applications Pdf

Microbial BioTechnology for Sustainable Agriculture Volume 1 by Naveen Kumar Arora,Brahim Bouizgarne Pdf

Current Developments in Biotechnology and Bioengineering by Swati Joshi,Ashok Pandey,Ranjna Sirohi,Sung Hoon Park Pdf

Omics for Environmental Engineering and Microbiology Systems by Vineet Kumar,Vinod Kumar Garg,Sunil Kumar,Jayanta Kumar Biswas Pdf

Microbial Community Studies in Industrial Wastewater Treatment by Maulin P. Shah Pdf

Antimicrobial Resistance in Agriculture and its Consequences by Arti Gupta,Ram Prasad Pdf

Omics Insights in Environmental Bioremediation by Vineet Kumar,Indu Shekhar Thakur Pdf

Pesticides Bioremediation by Sazada Siddiqui,Mukesh Kumar Meghvansi,Kamal Kishore Chaudhary Pdf

Metagenomics and Microbial Ecology by Surajit De Mandal,Amrita Kumari Panda,N. Senthil Kumar,Satpal Singh Bisht,Fengliang Jin Pdf

Advances in Plant Microbiome Research for Climate-Resilient Agriculture by Ashwani Kumar Pdf

Molecular Advances in Insect Resistance of Field Crops by Amarjit S Tanda Pdf

Metagenomics by Wael N. Hozzein Pdf

Metagenomics by Muniyandi Nagarajan Pdf

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