Nuclear Genome Stability Dna Replication Telomere Maintenance And Dna Repair

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Nuclear Genome Stability: DNA Replication, Telomere Maintenance, and DNA Repair

Author : Maria Isabel Nogueira Cano,Richard McCulloch,Marcelo Santos Da Silva
Publisher : Frontiers Media SA
Page : 297 pages
File Size : 43,8 Mb
Release : 2022-03-09
Category : Science
ISBN : 9782889746309

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Nuclear Genome Stability: DNA Replication, Telomere Maintenance, and DNA Repair by Maria Isabel Nogueira Cano,Richard McCulloch,Marcelo Santos Da Silva Pdf

Telomeres and Telomerase

Author : Predrag Slijepcevic
Publisher : S. Karger AG (Switzerland)
Page : 0 pages
File Size : 43,8 Mb
Release : 2008
Category : Telomerase
ISBN : 3805590636

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Telomeres and Telomerase by Predrag Slijepcevic Pdf

Telomeres are essential functional elements of eukaryotic chromosomes. Their fundamental biological role as protectors of chromosome stability was identified for the first time in the 1930s by Hermann Muller and Barbara McClintock based on pioneering cytological experiments. Modern molecular research carried out more recently revealed that telomeres and telomerase play important roles in processes such as carcinogenesis and cellular senescence. This special issue presents the most recent developments in this highly active field of research. It is becoming increasingly clear that molecular pathways involved in regulation of telomere length and structure are functionally linked with pathways involved in DNA damage response, cellular stress response, chromatin organization and perhaps even pathways that regulate evolutionary chromosome rearrangements. The above functional link is explored by the leading experts in the field of telomere biology. Cell biologists, molecular biologists, oncologists, gerontologists, and radiobiologists with an interest in the role of telomeres/telomerase will appreciate the up-to-date information in this publication.

Maintenance of Genome Integrity: DNA Damage Sensing, Signaling, Repair and Replication in Plants

Author : Alma Balestrazzi,V. Mohan Murali Achary,Anca Macovei,Kaoru Okamoto Yoshiyama,Ayako N Sakamoto
Publisher : Frontiers Media SA
Page : 131 pages
File Size : 43,8 Mb
Release : 2016-05-06
Category : Botany
ISBN : 9782889198207

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Maintenance of Genome Integrity: DNA Damage Sensing, Signaling, Repair and Replication in Plants by Alma Balestrazzi,V. Mohan Murali Achary,Anca Macovei,Kaoru Okamoto Yoshiyama,Ayako N Sakamoto Pdf

Environmental stresses and metabolic by-products can severely affect the integrity of genetic information by inducing DNA damage and impairing genome stability. As a consequence, plant growth and productivity are irreversibly compromised. To overcome genotoxic injury, plants have evolved complex strategies relying on a highly efficient repair machinery that responds to sophisticated damage perception/signaling networks. The DNA damage signaling network contains several key components: DNA damage sensors, signal transducers, mediators, and effectors. Most of these components are common to other eukaryotes but some features are unique to the plant kingdom. ATM and ATR are well-conserved members of PIKK family, which amplify and transduce signals to downstream effectors. ATM primarily responds to DNA double strand breaks while ATR responds to various forms of DNA damage. The signals from the activated transducer kinases are transmitted to the downstream cell-cycle regulators, such as CHK1, CHK2, and p53 in many eukaryotes. However, plants have no homologue of CHK1, CHK2 nor p53. The finding of Arabidopsis transcription factor SOG1 that seems functionally but not structurally similar to p53 suggests that plants have developed unique cell cycle regulation mechanism. The double strand break repair, recombination repair, postreplication repair, and lesion bypass, have been investigated in several plants. The DNA double strand break, a most critical damage for organisms are repaired non-homologous end joining (NHEJ) or homologous recombination (HR) pathway. Damage on template DNA makes replication stall, which is processed by translesion synthesis (TLS) or error-free postreplication repair (PPR) pathway. Deletion of the error-prone TLS polymerase reduces mutation frequencies, suggesting PPR maintains the stalled replication fork when TLS is not available. Unveiling the regulation networks among these multiple pathways would be the next challenge to be completed. Some intriguing issues have been disclosed such as the cross-talk between DNA repair, senescence and pathogen response and the involvement of non-coding RNAs in global genome stability. Several studies have highlighted the essential contribution of chromatin remodeling in DNA repair DNA damage sensing, signaling and repair have been investigated in relation to environmental stresses, seed quality issues, mutation breeding in both model and crop plants and all these studies strengthen the idea that components of the plant response to genotoxic stress might represent tools to improve stress tolerance and field performance. This focus issue gives researchers the opportunity to gather and interact by providing Mini-Reviews, Commentaries, Opinions, Original Research and Method articles which describe the most recent advances and future perspectives in the field of DNA damage sensing, signaling and repair in plants. A comprehensive overview of the current progresses dealing with the genotoxic stress response in plants will be provided looking at cellular and molecular level with multidisciplinary approaches. This will hopefully bring together valuable information for both plant biotechnologists and breeders.

The Evolving Telomeres

Author : Arthur J. Lustig,Kurt Runge
Publisher : Frontiers Media SA
Page : 76 pages
File Size : 53,7 Mb
Release : 2016-07-19
Category : Genetics
ISBN : 9782889198818

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The Evolving Telomeres by Arthur J. Lustig,Kurt Runge Pdf

What controls the different rates of evolution to give rise to conserved and divergent proteins and RNAs? How many trials until evolution can adapt to physiological changes? Every organism has arisen through multiple molecular changes, and the mechanisms that are employed (mutagenesis, recombination, transposition) have been an issue left to the elegant discipline of evolutionary biology. But behind the theory are realities that we have yet to ascertain: How does an evolving cell accommodate its requirements for both conserving its essential functions, while also providing a selective advantage? In this volume, we focus on the evolution of the eukaryotic telomere, the ribo-nuclear protein complex at the end of a linear chromosome. The telomere is an example of a single chromosomal element that must function to maintain genomic stability. The telomeres of all species must provide a means to avoid the attrition from semi-conservative DNA replication and a means of telomere elongation (the telomere replication problem). For example, telomerase is the most well-studied mechanism to circumvent telomere attrition by adding the short repeats that constitutes most telomeres. The telomere must also guard against the multiple activities that can act on an unprotected double strand break requiring a window (or checkpoint) to compensate for telomere sequence loss as well as protection against non-specific processes (the telomere protection problem). This volume describes a range of methodologies including mechanistic studies, phylogenetic comparisons and data-based theoretical approaches to study telomere evolution over a broad spectrum of organisms that includes plants, animals and fungi. In telomeres that are elongated by telomerases, different components have widely different rates of evolution. Telomerases evolved from roots in archaebacteria including splicing factors and LTR-transposition. At the conserved level, the telomere is a rebel among double strand breaks (DSBs) and has altered the function of the highly conserved proteins of the ATM pathway into an elegant means of protecting the chromosome end and maintaining telomere size homeostasis through a competition of positive and negative factors. This homeostasis, coupled with highly conserved capping proteins, is sufficient for protection. However, far more proteins are present at the telomere to provide additional species-specific functions. Do these proteins provide insight into how the cell allows for rapid change without self-destruction?

Genome Stability

Author : Igor Kovalchuk,Olga Kovalchuk
Publisher : Academic Press
Page : 762 pages
File Size : 44,7 Mb
Release : 2021-07-17
Category : Science
ISBN : 9780323856805

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Genome Stability by Igor Kovalchuk,Olga Kovalchuk Pdf

Genome Stability: From Virus to Human Application, Second Edition, a volume in the Translational Epigenetics series, explores how various species maintain genome stability and genome diversification in response to environmental factors. Here, across thirty-eight chapters, leading researchers provide a deep analysis of genome stability in DNA/RNA viruses, prokaryotes, single cell eukaryotes, lower multicellular eukaryotes, and mammals, examining how epigenetic factors contribute to genome stability and how these species pass memories of encounters to progeny. Topics also include major DNA repair mechanisms, the role of chromatin in genome stability, human diseases associated with genome instability, and genome stability in response to aging. This second edition has been fully revised to address evolving research trends, including CRISPRs/Cas9 genome editing; conventional versus transgenic genome instability; breeding and genetic diseases associated with abnormal DNA repair; RNA and extrachromosomal DNA; cloning, stem cells, and embryo development; programmed genome instability; and conserved and divergent features of repair. This volume is an essential resource for geneticists, epigeneticists, and molecular biologists who are looking to gain a deeper understanding of this rapidly expanding field, and can also be of great use to advanced students who are looking to gain additional expertise in genome stability. A deep analysis of genome stability research from various kingdoms, including epigenetics and transgenerational effects Provides comprehensive coverage of mechanisms utilized by different organisms to maintain genomic stability Contains applications of genome instability research and outcomes for human disease Features all-new chapters on evolving areas of genome stability research, including CRISPRs/Cas9 genome editing, RNA and extrachromosomal DNA, programmed genome instability, and conserved and divergent features of repair

Origin and Evolution of Telomeres

Author : Jozef Nosek
Publisher : CRC Press
Page : 194 pages
File Size : 50,5 Mb
Release : 2008-05-26
Category : Science
ISBN : 9781498713498

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Origin and Evolution of Telomeres by Jozef Nosek Pdf

Linear chromosomes represent an evolutionary innovation associated with the origin of eukaryotic cells. This book describes how linear chromosomes and primordial pathways for maintaining their terminal structures, telomeres, emerged in early eukaryotes.Telomeres, derived from the Greek meaning terminal part, were first described by Hermann Muller i

New Research Directions in DNA Repair

Author : Clark Chen
Publisher : BoD – Books on Demand
Page : 676 pages
File Size : 41,6 Mb
Release : 2013-05-22
Category : Medical
ISBN : 9789535111146

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New Research Directions in DNA Repair by Clark Chen Pdf

This book is intended for students and scientists working in the field of DNA repair. Select topics are presented here to illustrate novel concepts in DNA repair, the cross-talks between DNA repair and other fundamental cellular processes, and clinical translational efforts based on paradigms established in DNA repair. The book should serve as a supplementary text in courses and seminars as well as a general reference for biologists with an interest in DNA repair.

Ubiquitination Governing DNA Repair

Author : Effrossyni Boutou,Horst-Werner Stürzbecher
Publisher : Unknown
Page : 0 pages
File Size : 52,9 Mb
Release : 2018
Category : Microbiology
ISBN : 1838812644

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Ubiquitination Governing DNA Repair by Effrossyni Boutou,Horst-Werner Stürzbecher Pdf

The DNA Damage Response: Implications on Cancer Formation and Treatment

Author : Kum Kum Khanna,Yosef Shiloh
Publisher : Springer Science & Business Media
Page : 450 pages
File Size : 48,7 Mb
Release : 2009-09-18
Category : Medical
ISBN : 9789048125616

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The DNA Damage Response: Implications on Cancer Formation and Treatment by Kum Kum Khanna,Yosef Shiloh Pdf

The ?eld of cellular responses to DNA damage has attained widespread recognition and interest in recent years commensurate with its fundamental role in the ma- tenance of genomic stability. These responses, which are essential to preventing cellular death or malignant transformation, are organized into a sophisticated s- tem designated the “DNA damage response”. This system operates in all living organisms to maintain genomic stability in the face of constant attacks on the DNA from a variety of endogenous by-products of normal metabolism, as well as exogenous agents such as radiation and toxic chemicals in the environment. The response repairs DNA damage via an intricate cellular signal transduction network that coordinates with various processes such as regulation of DNA replication, tr- scriptional responses, and temporary cell cycle arrest to allow the repair to take place. Defects in this system result in severe genetic disorders involving tissue degeneration, sensitivity to speci?c damaging agents, immunode?ciency, genomic instability, cancer predisposition and premature aging. The ?nding that many of the crucial players involved in DNA damage response are structurally and functionally conserved in different species spurred discoveries of new players through similar analyses in yeast and mammals. We now understand the chain of events that leads to instantaneous activation of the massive cellular responses to DNA lesions. This book summarizes several new concepts in this rapidly evolving ?eld, and the advances in our understanding of the complex network of processes that respond to DNA damage.

Conn's Handbook of Models for Human Aging

Author : Jeffrey L. Ram,P. Michael Conn
Publisher : Academic Press
Page : 1218 pages
File Size : 41,8 Mb
Release : 2018-04-05
Category : Medical
ISBN : 9780128113547

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Conn's Handbook of Models for Human Aging by Jeffrey L. Ram,P. Michael Conn Pdf

Conn's Handbook of Models for Human Aging, Second Edition, presents key aspects of biology, nutrition, factors affecting lifespan, methods of age determination, use in research and the disadvantages/advantages of use. Using a multidisciplinary approach, this updated edition is designed as the only comprehensive, current work that covers the diversity in aging models. Chapters on comparative models explore age-related diseases, including Alzheimer's, joint disease, cataracts, cancer and obesity. Also included are new tricks and approaches not available in primary publications. This must-have handbook is an indispensable resource for researchers interested in the mechanisms of aging, gerontologists, health professionals, allied health practitioners and students. Combines both the methods of study for human aging and animal models Provides a historical overview and discussion of model availability, key methods and ethical issues Contains over 200 full color illustrations

Telomeres and Telomerase in Cancer

Author : Keiko Hiyama
Publisher : Springer Science & Business Media
Page : 380 pages
File Size : 41,7 Mb
Release : 2009-03-18
Category : Medical
ISBN : 9781603278799

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Telomeres and Telomerase in Cancer by Keiko Hiyama Pdf

Telomerase, an enzyme that maintains telomeres and endows eukaryotic cells with immortality, was first discovered in tetrahymena in 1985. In 1990s, it was proven that this enzyme also plays a key role in the infinite proliferation of human cancer cells. Now telomere and telomerase are widely accepted as important factors involved in cancer biology, and as promising diagnostic tools and therapeutic targets. Recently, role of telomerase in “cancer stem cells” has become another attractive story. Until now, there are several good books on telomere and telomerase focusing on biology in ciliates, yeasts, and mouse or basic sciences in human, providing basic scientists or students with updated knowledge.

DNA Repair

Author : Maddalena Mognato
Publisher : BoD – Books on Demand
Page : 234 pages
File Size : 45,7 Mb
Release : 2019-06-05
Category : Medical
ISBN : 9781838807825

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DNA Repair by Maddalena Mognato Pdf

This book offers a collection of chapters addressing different studies on DNA repair from a cellular and molecular point of view. The various contributions highlight the vastness of DNA repair process and the need for a deeper understanding. To this end, the recent considerations here presented can be a cue for scientists and students working on, or interested in, the subject of DNA repair in human cells. This book may suggest to readers new avenues of interplay between different kinds of DNA damage and cellular response for maintaining nuclear and mitochondrial genomic stability.

Telomerase and non-Telomerase Mechanisms of Telomere Maintenance

Author : Tammy A. Morrish
Publisher : BoD – Books on Demand
Page : 132 pages
File Size : 44,5 Mb
Release : 2020-04-01
Category : Science
ISBN : 9781789845747

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Telomerase and non-Telomerase Mechanisms of Telomere Maintenance by Tammy A. Morrish Pdf

This book, Telomerase and non-Telomerase Mechanisms of Telomere Maintenance, is a collection of reviewed and relevant research chapters, offering a comprehensive overview of recent developments in the field of biochemistry, genetics, and molecular biology. The book comprises single chapters authored by various researchers and edited by an expert active in the molecular biology research area. All chapters are individually complete but united under a common research topic. This publication aims to provide a thorough overview of the latest research efforts by international authors on biochemistry, genetics,and molecular biology, and open new possible research paths for further novel developments. A note from the publisher: It is with great sadness and regret that we inform the contributing authors and readers of this book that the Editor, Dr Tammy A. Morrish, passed away during the publishing process of the book and before having a chance to see its publication. The book Telomerase and non-Telomerase Mechanisms of Telomere Maintenance was her first edited volume with us. Fruitful collaboration continued until her final days. We would like to acknowledge Dr Morrish's contribution to scientific publishing, which she made during years of dedicated work, and express our gratitude for her pleasant cooperation with us.

DNA Helicases and DNA Motor Proteins

Author : Maria Spies
Publisher : Springer Science & Business Media
Page : 308 pages
File Size : 51,6 Mb
Release : 2012-11-19
Category : Medical
ISBN : 9781461450375

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DNA Helicases and DNA Motor Proteins by Maria Spies Pdf

In recent years, a number of groundbreaking structural and mechanistic studies deepened our understanding of helicase mechanisms and established new approaches for their analyses. Many fundamental mechanistic questions ranging from the mechanism of force generation, mechanochemical coupling to distinct mechanisms by which the same enzyme translocates on DNA removing obstacles, unwinds DNA and/or remodels nucleoprotein complexes, however, remain to be answered. It is even less understood how the helicase motors are incorporated into a wide range of genome maintenance and repair machines. The field has reached a stage when the studies of molecular mechanisms and basic biology of helicases can and shall be integrated with the studies of development, cancer and longevity. The objective of this book is to provide the first systematic overview of structure, function and regulation of DNA helicases and related molecular motors. By integrating the knowledge obtained through the diverse technical approaches ranging from single-molecule biophysics to cellular and molecular biological studies the editors aim to provide a unified view on how helicases function in the cell, are regulated in response to different cellular stresses and are integrated into large macromolecular assemblies to form a complex and adaptive living system.

The Mechanisms of DNA Replication

Author : David Stuart
Publisher : BoD – Books on Demand
Page : 502 pages
File Size : 55,8 Mb
Release : 2013-02-20
Category : Medical
ISBN : 9789535109914

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The Mechanisms of DNA Replication by David Stuart Pdf

DNA replication is a fundamental part of the life cycle of all organisms. Not surprisingly many aspects of this process display profound conservation across organisms in all domains of life. The chapters in this volume outline and review the current state of knowledge on several key aspects of the DNA replication process. This is a critical process in both normal growth and development and in relation to a broad variety of pathological conditions including cancer. The reader will be provided with new insights into the initiation, regulation, and progression of DNA replication as well as a collection of thought provoking questions and summaries to direct future investigations.