Statistical And Computational Methods In Brain Image Analysis
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Statistical and Computational Methods in Brain Image Analysis by Moo K. Chung Pdf
The massive amount of nonstandard high-dimensional brain imaging data being generated is often difficult to analyze using current techniques. This challenge in brain image analysis requires new computational approaches and solutions. But none of the research papers or books in the field describe the quantitative techniques with detailed illustratio
Statistical and Computational Methods in Brain Image Analysis by Moo K. Chung Pdf
The massive amount of nonstandard high-dimensional brain imaging data being generated is often difficult to analyze using current techniques. This challenge in brain image analysis requires new computational approaches and solutions. But none of the research papers or books in the field describe the quantitative techniques with detailed illustrations of actual imaging data and computer codes. Using MATLAB® and case study data sets, Statistical and Computational Methods in Brain Image Analysis is the first book to explicitly explain how to perform statistical analysis on brain imaging data. The book focuses on methodological issues in analyzing structural brain imaging modalities such as MRI and DTI. Real imaging applications and examples elucidate the concepts and methods. In addition, most of the brain imaging data sets and MATLAB codes are available on the author’s website. By supplying the data and codes, this book enables researchers to start their statistical analyses immediately. Also suitable for graduate students, it provides an understanding of the various statistical and computational methodologies used in the field as well as important and technically challenging topics.
Computational neuroanatomy is an emerging field that utilizes various non-invasive brain imaging modalities, such as MRI and DTI, in quantifying the spatiotemporal dynamics of the human brain structures in both normal and clinical populations. This discipline emerged about twenty years ago and has made substantial progress in the past decade. The main goals of this book are to provide an overview of various mathematical, statistical and computational methodologies used in the field to a wide range of researchers and students, and to address important yet technically challenging topics in further detail.
Author : Cornelius T. Leondes Publisher : World Scientific Publishing Company Incorporated Page : 387 pages File Size : 45,6 Mb Release : 2005 Category : Medical ISBN : 9812569936
Medical Imaging Systems Technology: Analysis and computational methods by Cornelius T. Leondes Pdf
Ch. 1. Modeling for medical image analysis : framework and applications / Marek Kretowski and Johanne Bézy-Wendling -- ch. 2. Biomechanical models for image analysis and simulation / M. Sermesant, H. Delingette and N. Ayache -- ch. 3. Techniques in fractal analysis and their applications in brain MRI / Khan M. Iftekharuddin -- ch. 4. Techniques in infrared microspectroscopy and advanced computational methods for colon cancer diagnosis / S. Mordechai ... [et al.] -- ch. 5. Advances in computerized image analysis methods on breast ultrasound / Anant Madabhushi and Dimitris N. Metaxas -- ch. 6. Techniques in blind deblurring of spiral computed tomography images and their applications / Ming Jiang and Jing Wang -- ch. 7. Model-based 3D encoding/2D decoding of medical imaging data / G. Menegaz -- ch. 8. Interpolation techniques in multimodality image registration and their application / Jeffrey Tsao, Jim Xiuquan Ji and Zhi-Pei Liang -- ch. 9. Automatic construction of cardiac statistical shape models : applications in SPECT and MR imaging / Sebastián Ordás and Alejandro F. Frangi -- ch. 10. Techniques for mutual information-based brain image. Registration and their applications / Hua-Mei Chen and Pramod K. Varshney -- ch. 11. Iterative algebraic algorithms for image reconstruction / Ming Jiang
Computational Methods for Molecular Imaging by Fei Gao,Kuangyu Shi,Shuo Li Pdf
This volume contains original submissions on the development and application of molecular imaging computing. The editors invited authors to submit high-quality contributions on a wide range of topics including, but not limited to: • Image Synthesis & Reconstruction of Emission Tomography (PET, SPECT) and other Molecular Imaging Modalities • Molecular Imaging Enhancement • Data Analysis of Clinical & Pre-clinical Molecular Imaging • Multi-Modal Image Processing (PET/CT, PET/MR, SPECT/CT, etc.) • Machine Learning and Data Mining in Molecular Imaging. Molecular imaging is an evolving clinical and research discipline enabling the visualization, characterization and quantification of biological processes taking place at the cellular and subcellular levels within intact living subjects. Computational methods play an important role in the development of molecular imaging, from image synthesis to data analysis and from clinical diagnosis to therapy individualization. This work will bring readers from academia and industry up to date on the most recent developments in this field.
The Statistical Analysis of Functional MRI Data by Nicole Lazar Pdf
The study of brain function is one of the most fascinating pursuits of m- ern science. Functional neuroimaging is an important component of much of the current research in cognitive, clinical, and social psychology. The exci- ment of studying the brain is recognized in both the popular press and the scienti?c community. In the pages of mainstream publications, including The New York Times and Wired, readers can learn about cutting-edge research into topics such as understanding how customers react to products and - vertisements (“If your brain has a ‘buy button,’ what pushes it?”, The New York Times,October19,2004),howviewersrespondtocampaignads(“Using M. R. I. ’s to see politics on the brain,” The New York Times, April 20, 2004; “This is your brain on Hillary: Political neuroscience hits new low,” Wired, November 12,2007),howmen and womenreactto sexualstimulation (“Brain scans arouse researchers,”Wired, April 19, 2004), distinguishing lies from the truth (“Duped,” The New Yorker, July 2, 2007; “Woman convicted of child abuse hopes fMRI can prove her innocence,” Wired, November 5, 2007), and even what separates “cool” people from “nerds” (“If you secretly like Michael Bolton, we’ll know,” Wired, October 2004). Reports on pathologies such as autism, in which neuroimaging plays a large role, are also common (for - stance, a Time magazine cover story from May 6, 2002, entitled “Inside the world of autism”).
Statistical and Computational Methods in Brain Image Analysis by Moo K. Chung Pdf
The massive amount of nonstandard high-dimensional brain imaging data being generated is often difficult to analyze using current techniques. This challenge in brain image analysis requires new computational approaches and solutions. But none of the research papers or books in the field describe the quantitative techniques with detailed illustrations of actual imaging data and computer codes. Using MATLAB® and case study data sets, Statistical and Computational Methods in Brain Image Analysis is the first book to explicitly explain how to perform statistical analysis on brain imaging data. The book focuses on methodological issues in analyzing structural brain imaging modalities such as MRI and DTI. Real imaging applications and examples elucidate the concepts and methods. In addition, most of the brain imaging data sets and MATLAB codes are available on the author’s website. By supplying the data and codes, this book enables researchers to start their statistical analyses immediately. Also suitable for graduate students, it provides an understanding of the various statistical and computational methodologies used in the field as well as important and technically challenging topics.
Medical Imaging Systems Technology by Cornelius T Leondes Pdf
Readership: Academics, researchers, industrialists, postgraduate and graduate students in databases, fuzzy logic, machine vision/pattern recognition, neural networks, bioengineering, electrical & electronic engineering, and bioinformatics.Key Features: Provides a significant and uniquely comprehensive reference source for research workers and practitioners Features 130 contributors from 27 countries, among the foremost authorities in industry, government and academia Institutions, laboratories and individuals involved in the area of medical imaging should possess this setKeywords:Medical Imaging;Systems Technology;Cardiovascular Systems;Brain Systems;General Anatomy;Modalities;Diagnosis Optimization Methods;Computational Methods
Functional Magnetic Resonance Imaging Processing by Xingfeng Li Pdf
With strong numerical and computational focus, this book serves as an essential resource on the methods for functional neuroimaging analysis, diffusion weighted image analysis, and longitudinal VBM analysis. It includes four MRI image modalities analysis methods. The first covers the PWI methods, which is the basis for understanding cerebral flow in human brain. The second part, the book’s core, covers fMRI methods in three specific domains: first level analysis, second level analysis, and effective connectivity study. The third part covers the analysis of Diffusion weighted image, i.e. DTI, QBI and DSI image analysis. Finally, the book covers (longitudinal) VBM methods and its application to Alzheimer’s disease study.
Natural Image Statistics by Aapo Hyvärinen,Jarmo Hurri,Patrick O. Hoyer Pdf
Aims and Scope This book is both an introductory textbook and a research monograph on modeling the statistical structure of natural images. In very simple terms, “natural images” are photographs of the typical environment where we live. In this book, their statistical structure is described using a number of statistical models whose parameters are estimated from image samples. Our main motivation for exploring natural image statistics is computational m- eling of biological visual systems. A theoretical framework which is gaining more and more support considers the properties of the visual system to be re?ections of the statistical structure of natural images because of evolutionary adaptation processes. Another motivation for natural image statistics research is in computer science and engineering, where it helps in development of better image processing and computer vision methods. While research on natural image statistics has been growing rapidly since the mid-1990s, no attempt has been made to cover the ?eld in a single book, providing a uni?ed view of the different models and approaches. This book attempts to do just that. Furthermore, our aim is to provide an accessible introduction to the ?eld for students in related disciplines.
Riemannian Geometric Statistics in Medical Image Analysis by Xavier Pennec,Stefan Sommer,Tom Fletcher Pdf
Over the past 15 years, there has been a growing need in the medical image computing community for principled methods to process nonlinear geometric data. Riemannian geometry has emerged as one of the most powerful mathematical and computational frameworks for analyzing such data. Riemannian Geometric Statistics in Medical Image Analysis is a complete reference on statistics on Riemannian manifolds and more general nonlinear spaces with applications in medical image analysis. It provides an introduction to the core methodology followed by a presentation of state-of-the-art methods. Beyond medical image computing, the methods described in this book may also apply to other domains such as signal processing, computer vision, geometric deep learning, and other domains where statistics on geometric features appear. As such, the presented core methodology takes its place in the field of geometric statistics, the statistical analysis of data being elements of nonlinear geometric spaces. The foundational material and the advanced techniques presented in the later parts of the book can be useful in domains outside medical imaging and present important applications of geometric statistics methodology Content includes: The foundations of Riemannian geometric methods for statistics on manifolds with emphasis on concepts rather than on proofs Applications of statistics on manifolds and shape spaces in medical image computing Diffeomorphic deformations and their applications As the methods described apply to domains such as signal processing (radar signal processing and brain computer interaction), computer vision (object and face recognition), and other domains where statistics of geometric features appear, this book is suitable for researchers and graduate students in medical imaging, engineering and computer science. A complete reference covering both the foundations and state-of-the-art methods Edited and authored by leading researchers in the field Contains theory, examples, applications, and algorithms Gives an overview of current research challenges and future applications
William D. Penny,Karl J. Friston,John T. Ashburner,Stefan J. Kiebel,Thomas E. Nichols
Author : William D. Penny,Karl J. Friston,John T. Ashburner,Stefan J. Kiebel,Thomas E. Nichols Publisher : Elsevier Page : 689 pages File Size : 54,9 Mb Release : 2011-04-28 Category : Psychology ISBN : 9780080466507
Statistical Parametric Mapping: The Analysis of Functional Brain Images by William D. Penny,Karl J. Friston,John T. Ashburner,Stefan J. Kiebel,Thomas E. Nichols Pdf
In an age where the amount of data collected from brain imaging is increasing constantly, it is of critical importance to analyse those data within an accepted framework to ensure proper integration and comparison of the information collected. This book describes the ideas and procedures that underlie the analysis of signals produced by the brain. The aim is to understand how the brain works, in terms of its functional architecture and dynamics. This book provides the background and methodology for the analysis of all types of brain imaging data, from functional magnetic resonance imaging to magnetoencephalography. Critically, Statistical Parametric Mapping provides a widely accepted conceptual framework which allows treatment of all these different modalities. This rests on an understanding of the brain's functional anatomy and the way that measured signals are caused experimentally. The book takes the reader from the basic concepts underlying the analysis of neuroimaging data to cutting edge approaches that would be difficult to find in any other source. Critically, the material is presented in an incremental way so that the reader can understand the precedents for each new development. This book will be particularly useful to neuroscientists engaged in any form of brain mapping; who have to contend with the real-world problems of data analysis and understanding the techniques they are using. It is primarily a scientific treatment and a didactic introduction to the analysis of brain imaging data. It can be used as both a textbook for students and scientists starting to use the techniques, as well as a reference for practicing neuroscientists. The book also serves as a companion to the software packages that have been developed for brain imaging data analysis. An essential reference and companion for users of the SPM software Provides a complete description of the concepts and procedures entailed by the analysis of brain images Offers full didactic treatment of the basic mathematics behind the analysis of brain imaging data Stands as a compendium of all the advances in neuroimaging data analysis over the past decade Adopts an easy to understand and incremental approach that takes the reader from basic statistics to state of the art approaches such as Variational Bayes Structured treatment of data analysis issues that links different modalities and models Includes a series of appendices and tutorial-style chapters that makes even the most sophisticated approaches accessible
Multivariate Analysis for Neuroimaging Data by Atsushi Kawaguchi Pdf
This book describes methods for statistical brain imaging data analysis from both the perspective of methodology and from the standpoint of application for software implementation in neuroscience research. These include those both commonly used (traditional established) and state of the art methods. The former is easier to do due to the availability of appropriate software. To understand the methods it is necessary to have some mathematical knowledge which is explained in the book with the help of figures and descriptions of the theory behind the software. In addition, the book includes numerical examples to guide readers on the working of existing popular software. The use of mathematics is reduced and simplified for non-experts using established methods, which also helps in avoiding mistakes in application and interpretation. Finally, the book enables the reader to understand and conceptualize the overall flow of brain imaging data analysis, particularly for statisticians and data-scientists unfamiliar with this area. The state of the art method described in the book has a multivariate approach developed by the authors’ team. Since brain imaging data, generally, has a highly correlated and complex structure with large amounts of data, categorized into big data, the multivariate approach can be used as dimension reduction by following the application of statistical methods. The R package for most of the methods described is provided in the book. Understanding the background theory is helpful in implementing the software for original and creative applications and for an unbiased interpretation of the output. The book also explains new methods in a conceptual manner. These methodologies and packages are commonly applied in life science data analysis. Advanced methods to obtain novel insights are introduced, thereby encouraging the development of new methods and applications for research into medicine as a neuroscience.
Multimodal Brain Image Analysis and Mathematical Foundations of Computational Anatomy by Dajiang Zhu,Jingwen Yan,Heng Huang,Li Shen,Paul M. Thompson,Carl-Fredrik Westin,Xavier Pennec,Sarang Joshi,Mads Nielsen,Tom Fletcher,Stanley Durrleman,Stefan Sommer Pdf
This book constitutes the refereed joint proceedings of the 4th International Workshop on Multimodal Brain Image Analysis, MBAI 2019, and the 7th International Workshop on Mathematical Foundations of Computational Anatomy, MFCA 2019, held in conjunction with the 22nd International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2019, in Shenzhen, China, in October 2019. The 16 full papers presented at MBAI 2019 and the 7 full papers presented at MFCA 2019 were carefully reviewed and selected. The MBAI papers intend to move forward the state of the art in multimodal brain image analysis, in terms of analysis methodologies, algorithms, software systems, validation approaches, benchmark datasets, neuroscience, and clinical applications. The MFCA papers are devoted to statistical and geometrical methods for modeling the variability of biological shapes. The goal is to foster the interactions between the mathematical community around shapes and the MICCAI community around computational anatomy applications.
