Statistical Methods For Environmental Epidemiology With R

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Statistical Methods for Environmental Epidemiology with R

Roger D. Peng,Francesca Dominici
Statistical Methods for Environmental Epidemiology with R Book PDF

Author : Roger D. Peng,Francesca Dominici
Publisher : Springer Science & Business Media
Page : 151 pages
File Size : 47,5 Mb
Release : 2008-12-15
Category : Medical
ISBN : 9780387781679

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Statistical Methods for Environmental Epidemiology with R by Roger D. Peng,Francesca Dominici Pdf

As an area of statistical application, environmental epidemiology and more speci cally, the estimation of health risk associated with the exposure to - vironmental agents, has led to the development of several statistical methods and software that can then be applied to other scienti c areas. The stat- tical analyses aimed at addressing questions in environmental epidemiology have the following characteristics. Often the signal-to-noise ratio in the data is low and the targets of inference are inherently small risks. These constraints typically lead to the development and use of more sophisticated (and pot- tially less transparent) statistical models and the integration of large hi- dimensional databases. New technologies and the widespread availability of powerful computing are also adding to the complexities of scienti c inves- gation by allowing researchers to t large numbers of models and search over many sets of variables. As the number of variables measured increases, so do the degrees of freedom for in uencing the association between a risk factor and an outcome of interest. We have written this book, in part, to describe our experiences developing and applying statistical methods for the estimation for air pollution health e ects. Our experience has convinced us that the application of modern s- tistical methodology in a reproducible manner can bring to bear subst- tial bene ts to policy-makers and scientists in this area. We believe that the methods described in this book are applicable to other areas of environmental epidemiology, particularly those areas involving spatial{temporal exposures.

Statistical Methods in Environmental Epidemiology

Duncan C. Thomas
Statistical Methods in Environmental Epidemiology Book PDF

Author : Duncan C. Thomas
Publisher : Oxford University Press, USA
Page : 450 pages
File Size : 40,9 Mb
Release : 2009
Category : Medical
ISBN : 9780191552687

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Statistical Methods in Environmental Epidemiology by Duncan C. Thomas Pdf

A systematic treatment of the statistical challenges that arise in environmental health studies and the use epidemiologic data in formulating public policy, at a level suitable for graduate students and epidemiologic researchers.

Spatio-Temporal Methods in Environmental Epidemiology

Gavin Shaddick,James V. Zidek
Spatio Temporal Methods in Environmental Epidemiology Book PDF

Author : Gavin Shaddick,James V. Zidek
Publisher : CRC Press
Page : 395 pages
File Size : 47,6 Mb
Release : 2015-06-17
Category : Mathematics
ISBN : 9781482237047

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Spatio-Temporal Methods in Environmental Epidemiology by Gavin Shaddick,James V. Zidek Pdf

Teaches Students How to Perform Spatio-Temporal Analyses within Epidemiological Studies Spatio-Temporal Methods in Environmental Epidemiology is the first book of its kind to specifically address the interface between environmental epidemiology and spatio-temporal modeling. In response to the growing need for collaboration between statisticians and environmental epidemiologists, the book links recent developments in spatio-temporal methodology with epidemiological applications. Drawing on real-life problems, it provides the necessary tools to exploit advances in methodology when assessing the health risks associated with environmental hazards. The book’s clear guidelines enable the implementation of the methodology and estimation of risks in practice. Designed for graduate students in both epidemiology and statistics, the text covers a wide range of topics, from an introduction to epidemiological principles and the foundations of spatio-temporal modeling to new research directions. It describes traditional and Bayesian approaches and presents the theory of spatial, temporal, and spatio-temporal modeling in the context of its application to environmental epidemiology. The text includes practical examples together with embedded R code, details of specific R packages, and the use of other software, such as WinBUGS/OpenBUGS and integrated nested Laplace approximations (INLA). A supplementary website provides additional code, data, examples, exercises, lab projects, and more. Representing a major new direction in environmental epidemiology, this book—in full color throughout—underscores the increasing need to consider dependencies in both space and time when modeling epidemiological data. Students will learn how to identify and model patterns in spatio-temporal data as well as exploit dependencies over space and time to reduce bias and inefficiency.

Spatio–Temporal Methods in Environmental Epidemiology with R

Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt
Spatio Temporal Methods in Environmental Epidemiology with R Book PDF

Author : Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt
Publisher : CRC Press
Page : 458 pages
File Size : 40,5 Mb
Release : 2023-12-12
Category : Medical
ISBN : 9781003808022

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Spatio–Temporal Methods in Environmental Epidemiology with R by Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt Pdf

Spatio-Temporal Methods in Environmental Epidemiology with R, like its First Edition, explores the interface between environmental epidemiology and spatio-temporal modeling. It links recent developments in spatio-temporal theory with epidemiological applications. Drawing on real-life problems, it shows how recent advances in methodology can assess the health risks associated with environmental hazards. The book's clear guidelines enable the implementation of the methodology and estimation of risks in practice. New additions to the Second Edition include: a thorough exploration of the underlying concepts behind knowledge discovery through data; a new chapter on extracting information from data using R and the tidyverse; additional material on methods for Bayesian computation, including the use of NIMBLE and Stan; new methods for performing spatio-temporal analysis and an updated chapter containing further topics. Throughout the book there are new examples, and the presentation of R code for examples has been extended. Along with these additions, the book now has a GitHub site (https://spacetime-environ.github.io/stepi2) that contains data, code and further worked examples. Features: • Explores the interface between environmental epidemiology and spatio­-temporal modeling • Incorporates examples that show how spatio-temporal methodology can inform societal concerns about the effects of environmental hazards on health • Uses a Bayesian foundation on which to build an integrated approach to spatio-temporal modeling and environmental epidemiology • Discusses data analysis and topics such as data visualization, mapping, wrangling and analysis • Shows how to design networks for monitoring hazardous environmental processes and the ill effects of preferential sampling • Through the listing and application of code, shows the power of R, tidyverse, NIMBLE and Stan and other modern tools in performing complex data analysis and modeling Representing a continuing important direction in environmental epidemiology, this book – in full color throughout – underscores the increasing need to consider dependencies in both space and time when modeling epidemiological data. Readers will learn how to identify and model patterns in spatio-temporal data and how to exploit dependencies over space and time to reduce bias and inefficiency when estimating risks to health.

Statistical Methods in Environmental Epidemiology

Duncan C. Thomas
Statistical Methods in Environmental Epidemiology Book PDF

Author : Duncan C. Thomas
Publisher : OUP Oxford
Page : 448 pages
File Size : 47,8 Mb
Release : 2009-02-26
Category : Science
ISBN : 9780191552694

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Statistical Methods in Environmental Epidemiology by Duncan C. Thomas Pdf

Environmental epidemiology is the study of the environmental causes of disease in populations and how these risks vary in relation to intensity and duration of exposure and other factors like genetic susceptibility. As such, it is the basic science upon which governmental safety standards and compensation policies for environmental and occupational exposure are based. Profusely illustrated with examples from the epidemiologic literature on ionizing radiation and air pollution, this text provides a systematic treatment of the statistical challenges that arise in environmental health studies and the use epidemiologic data in formulating public policy, at a level suitable for graduate students and epidemiologic researchers. After a general overview of study design and statistical methods for epidemiology generally, the book goes on to address the problems that are unique to environmental health studies, special-purpose designs like two-phase case-control studies and countermatching, statistical methods for modeling exposure-time-response relationships, longitudinal and time-series studies, spatial and ecologic methods, exposure measurement error, interactions, and mechanistic models. It also discusses studies aimed at evaluating the public health benefits of interventions to improve the environment, the use of epidemiologic data to establish environmental safety standards and compensation policy, and concludes with emerging problems in reproductive epidemiology, natural and man-made disasters like global warming, and the global burden of environmentally caused disease. No other book provides such a broad perspective on the methodological challenges in this field at a level accessible to both epidemiologists and statisticians.

Spatio-temporal Methods in Environmental Epidemiology with R

Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt
Spatio temporal Methods in Environmental Epidemiology with R Book PDF

Author : Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt
Publisher : Unknown
Page : 0 pages
File Size : 48,6 Mb
Release : 2024
Category : Environmental health
ISBN : 1032403519

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Spatio-temporal Methods in Environmental Epidemiology with R by Gavin Shaddick,James V. Zidek,Alexandra M. Schmidt Pdf

"Spatio-Temporal Methods in Environmental Epidemiology with R, Second Edition is the first book of its kind to specifically address the interface between environmental epidemiology and spatio-temporal modeling. In response to the growing need for collaboration between statisticians and environmental epidemiologists. The book links recent developments in spatio-temporal methodology with epidemiological applications. Drawing on real-life problems, it provides the necessary tools to exploit advances in methodology when assessing the health risks associated with environmental hazards. The book's clear guidelines enable the implementation of the methodology and estimation of risks in practice. Designed for graduate students in both epidemiology and statistics, the text covers a wide range of topics, from an introduction to epidemiological principles and the foundations of spatio-temporal MED, to new research directions. It describes traditional and Bayesian approaches and presents the theory of spatial, temporal, and spatio-temporal modeling in the context of its application to environmental epidemiology. The text includes practical examples, together with embedded R code, details of specific R packages, and the use of other software, such as WinBUGS/OpenBUGS and integrated nested Laplace approximations (INLA). A supplementary website provides additional code, data, examples, exercises, lab projects, and more. New to this edition: Includes a new chapter on data science Updated material on measurement error, deterministic modeling, infectious diseases, and preferential sampling Introduces modern computational methods, including INLA, together with code for implementation Represents a major new direction in environmental epidemiology, this book-in full color throughout-underscoring the increasing need to consider dependencies in both space and time when modeling epidemiological data. Students will learn how to identify and model patterns in spatio-temporal data as well as exploit dependencies over space and time to reduce bias and inefficiency"--

Statistical Data Analysis Explained

Clemens Reimann,Peter Filzmoser,Robert Garrett,Rudolf Dutter
Statistical Data Analysis Explained Book PDF

Author : Clemens Reimann,Peter Filzmoser,Robert Garrett,Rudolf Dutter
Publisher : John Wiley & Sons
Page : 380 pages
File Size : 54,6 Mb
Release : 2011-08-31
Category : Science
ISBN : 9781119965282

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Statistical Data Analysis Explained by Clemens Reimann,Peter Filzmoser,Robert Garrett,Rudolf Dutter Pdf

Few books on statistical data analysis in the natural sciences are written at a level that a non-statistician will easily understand. This is a book written in colloquial language, avoiding mathematical formulae as much as possible, trying to explain statistical methods using examples and graphics instead. To use the book efficiently, readers should have some computer experience. The book starts with the simplest of statistical concepts and carries readers forward to a deeper and more extensive understanding of the use of statistics in environmental sciences. The book concerns the application of statistical and other computer methods to the management, analysis and display of spatial data. These data are characterised by including locations (geographic coordinates), which leads to the necessity of using maps to display the data and the results of the statistical methods. Although the book uses examples from applied geochemistry, and a large geochemical survey in particular, the principles and ideas equally well apply to other natural sciences, e.g., environmental sciences, pedology, hydrology, geography, forestry, ecology, and health sciences/epidemiology. The book is unique because it supplies direct access to software solutions (based on R, the Open Source version of the S-language for statistics) for applied environmental statistics. For all graphics and tables presented in the book, the R-scripts are provided in the form of executable R-scripts. In addition, a graphical user interface for R, called DAS+R, was developed for convenient, fast and interactive data analysis. Statistical Data Analysis Explained: Applied Environmental Statistics with R provides, on an accompanying website, the software to undertake all the procedures discussed, and the data employed for their description in the book.

Statistical Methods for Global Health and Epidemiology

Xinguang Chen,(Din) Ding-Geng Chen
Statistical Methods for Global Health and Epidemiology Book PDF

Author : Xinguang Chen,(Din) Ding-Geng Chen
Publisher : Springer Nature
Page : 420 pages
File Size : 54,8 Mb
Release : 2020-04-13
Category : Medical
ISBN : 9783030352608

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Statistical Methods for Global Health and Epidemiology by Xinguang Chen,(Din) Ding-Geng Chen Pdf

This book examines statistical methods and models used in the fields of global health and epidemiology. It includes methods such as innovative probability sampling, data harmonization and encryption, and advanced descriptive, analytical and monitory methods. Program codes using R are included as well as real data examples. Contemporary global health and epidemiology involves a myriad of medical and health challenges, including inequality of treatment, the HIV/AIDS epidemic and its subsequent control, the flu, cancer, tobacco control, drug use, and environmental pollution. In addition to its vast scales and telescopic perspective; addressing global health concerns often involves examining resource-limited populations with large geographic, socioeconomic diversities. Therefore, advancing global health requires new epidemiological design, new data, and new methods for sampling, data processing, and statistical analysis. This book provides global health researchers with methods that will enable access to and utilization of existing data. Featuring contributions from both epidemiological and biostatistical scholars, this book is a practical resource for researchers, practitioners, and students in solving global health problems in research, education, training, and consultation.

Handbook of Environmental and Ecological Statistics

Alan E. Gelfand,Montserrat Fuentes,Jennifer A. Hoeting,Richard Lyttleton Smith
Handbook of Environmental and Ecological Statistics Book PDF

Author : Alan E. Gelfand,Montserrat Fuentes,Jennifer A. Hoeting,Richard Lyttleton Smith
Publisher : CRC Press
Page : 679 pages
File Size : 44,8 Mb
Release : 2019-01-15
Category : Mathematics
ISBN : 9781351648547

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Handbook of Environmental and Ecological Statistics by Alan E. Gelfand,Montserrat Fuentes,Jennifer A. Hoeting,Richard Lyttleton Smith Pdf

This handbook focuses on the enormous literature applying statistical methodology and modelling to environmental and ecological processes. The 21st century statistics community has become increasingly interdisciplinary, bringing a large collection of modern tools to all areas of application in environmental processes. In addition, the environmental community has substantially increased its scope of data collection including observational data, satellite-derived data, and computer model output. The resultant impact in this latter community has been substantial; no longer are simple regression and analysis of variance methods adequate. The contribution of this handbook is to assemble a state-of-the-art view of this interface. Features: An internationally regarded editorial team. A distinguished collection of contributors. A thoroughly contemporary treatment of a substantial interdisciplinary interface. Written to engage both statisticians as well as quantitative environmental researchers. 34 chapters covering methodology, ecological processes, environmental exposure, and statistical methods in climate science.

Applied Statistics for Environmental Science with R

Abbas F. M. Al-Karkhi,Wasin A. A. Alqaraghuli
Applied Statistics for Environmental Science with R Book PDF

Author : Abbas F. M. Al-Karkhi,Wasin A. A. Alqaraghuli
Publisher : Elsevier
Page : 240 pages
File Size : 50,7 Mb
Release : 2019-09-13
Category : Computers
ISBN : 9780128186237

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Applied Statistics for Environmental Science with R by Abbas F. M. Al-Karkhi,Wasin A. A. Alqaraghuli Pdf

Applied Statistics for Environmental Science with R presents the theory and application of statistical techniques in environmental science and aids researchers in choosing the appropriate statistical technique for analyzing their data. Focusing on the use of univariate and multivariate statistical methods, this book acts as a step-by-step resource to facilitate understanding in the use of R statistical software for interpreting data in the field of environmental science. Researchers utilizing statistical analysis in environmental science and engineering will find this book to be essential in solving their day-to-day research problems. Includes step-by-step tutorials to aid in understanding the process and implementation of unique data Presents statistical theory in a simple way without complex mathematical proofs Shows how to analyze data using R software and provides R scripts for all examples and figures

Statistical Methods for Disease Clustering

Toshiro Tango
Statistical Methods for Disease Clustering Book PDF

Author : Toshiro Tango
Publisher : Springer Science & Business Media
Page : 240 pages
File Size : 51,8 Mb
Release : 2010-01-09
Category : Mathematics
ISBN : 9781441915726

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Statistical Methods for Disease Clustering by Toshiro Tango Pdf

This book is intended to provide a text on statistical methods for detecting clus ters and/or clustering of health events that is of interest to ?nal year undergraduate and graduate level statistics, biostatistics, epidemiology, and geography students but will also be of relevance to public health practitioners, statisticians, biostatisticians, epidemiologists, medical geographers, human geographers, environmental scien tists, and ecologists. Prerequisites are introductory biostatistics and epidemiology courses. With increasing public health concerns about environmental risks, the need for sophisticated methods for analyzing spatial health events is immediate. Further more, the research area of statistical tests for disease clustering now attracts a wide audience due to the perceived need to implement wide ranging monitoring systems to detect possible health related bioterrorism activity. With this background and the development of the geographical information system (GIS), the analysis of disease clustering of health events has seen considerable development over the last decade. Therefore, several excellent books on spatial epidemiology and statistics have re cently been published. However, it seems to me that there is no other book solely focusing on statistical methods for disease clustering. I hope that readers will ?nd this book useful and interesting as an introduction to the subject.

EnvStats

Steven P. Millard
EnvStats Book PDF

Author : Steven P. Millard
Publisher : Springer Science & Business Media
Page : 305 pages
File Size : 42,6 Mb
Release : 2013-10-16
Category : Computers
ISBN : 9781461484561

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EnvStats by Steven P. Millard Pdf

This book describes EnvStats, a new comprehensive R package for environmental statistics and the successor to the S-PLUS module EnvironmentalStats for S-PLUS (first released in 1997). EnvStats and R provide an open-source set of powerful functions for performing graphical and statistical analyses of environmental data, bringing major environmental statistical methods found in the literature and regulatory guidance documents into one statistical package, along with an extensive hypertext help system that explains what these methods do, how to use these methods, and where to find them in the environmental statistics literature. EnvStats also includes numerous built-in data sets from regulatory guidance documents and the environmental statistics literature. This book shows how to use EnvStats and R to easily: * graphically display environmental data * plot probability distributions * estimate distribution parameters and construct confidence intervals on the original scale for commonly used distributions such as the lognormal and gamma, as well as do this nonparametrically * estimate and construct confidence intervals for distribution percentiles or do this nonparametrically (e.g., to compare to an environmental protection standard) * perform and plot the results of goodness-of-fit tests * compute optimal Box-Cox data transformations * compute prediction limits and simultaneous prediction limits (e.g., to assess compliance at multiple sites for multiple constituents) * perform nonparametric estimation and test for seasonal trend (even in the presence of correlated observations) * perform power and sample size computations and create companion plots for sampling designs based on confidence intervals, hypothesis tests, prediction intervals, and tolerance intervals * deal with non-detect (censored) data * perform Monte Carlo simulation and probabilistic risk assessment * reproduce specific examples in EPA guidance documents EnvStats combined with other R packages (e.g., for spatial analysis) provides the environmental scientist, statistician, researcher, and technician with tools to “get the job done!”

Geospatial Health Data

Paula Moraga
Geospatial Health Data Book PDF

Author : Paula Moraga
Publisher : CRC Press
Page : 217 pages
File Size : 40,5 Mb
Release : 2019-11-26
Category : Medical
ISBN : 9781000732153

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Geospatial Health Data by Paula Moraga Pdf

Geospatial health data are essential to inform public health and policy. These data can be used to quantify disease burden, understand geographic and temporal patterns, identify risk factors, and measure inequalities. Geospatial Health Data: Modeling and Visualization with R-INLA and Shiny describes spatial and spatio-temporal statistical methods and visualization techniques to analyze georeferenced health data in R. The book covers the following topics: Manipulate and transform point, areal, and raster data, Bayesian hierarchical models for disease mapping using areal and geostatistical data, Fit and interpret spatial and spatio-temporal models with the Integrated Nested Laplace Approximations (INLA) and the Stochastic Partial Differential Equation (SPDE) approaches, Create interactive and static visualizations such as disease maps and time plots, Reproducible R Markdown reports, interactive dashboards, and Shiny web applications that facilitate the communication of insights to collaborators and policy makers. The book features fully reproducible examples of several disease and environmental applications using real-world data such as malaria in The Gambia, cancer in Scotland and USA, and air pollution in Spain. Examples in the book focus on health applications, but the approaches covered are also applicable to other fields that use georeferenced data including epidemiology, ecology, demography or criminology. The book provides clear descriptions of the R code for data importing, manipulation, modeling and visualization, as well as the interpretation of the results. This ensures contents are fully reproducible and accessible for students, researchers and practitioners.

Biostatistics for Epidemiology and Public Health Using R

Bertram K.C. Chan, PhD
Biostatistics for Epidemiology and Public Health Using R Book PDF

Author : Bertram K.C. Chan, PhD
Publisher : Springer Publishing Company
Page : 500 pages
File Size : 47,8 Mb
Release : 2015-11-05
Category : Medical
ISBN : 9780826110268

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Biostatistics for Epidemiology and Public Health Using R by Bertram K.C. Chan, PhD Pdf

Since it first appeared in 1996, the open-source programming language R has become increasingly popular as an environment for statistical analysis and graphical output. This is the first textbook to present classical biostatistical analysis for epidemiology and related public health sciences to students using the R language. Based on the assumption that readers have minimal familiarity with statistical concepts, the author uses a step-by-step approach to building skills. The text encompasses biostatistics from basic descriptive and quantitative statistics to survival analysis and missing data analysis in epidemiology. Illustrative examples, including real-life research problems drawn from such areas as nutrition, environmental health, and behavioral health, engage students and reinforce the understanding of R. These examples illustrate the replication of R for biostatistical calculations and graphical display of results. The text covers both essential and advanced techniques and applications in biostatistics that are relevant to epidemiology. Also included are an instructor's guide, student solutions manual, and downloadable data sets. Key Features: First overview biostatistics textbook for epidemiology and public health that uses the open-source R program Covers essential and advanced techniques and applications in biostatistics as relevant to epidemiology Features abundant examples to illustrate the application of R language for biostatistical calculations and graphical displays of results Includes instructor's guide, student solutions manual, and downloadable data sets.

Environmental Epidemiology

Ray M. Merrill
Environmental Epidemiology Book PDF

Author : Ray M. Merrill
Publisher : Jones & Bartlett Learning
Page : 495 pages
File Size : 49,6 Mb
Release : 2008
Category : Medical
ISBN : 9780763741525

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Environmental Epidemiology by Ray M. Merrill Pdf

Environmental epidemiology plays a critical role in public health, providing a scientific approach to understanding and describing the relationship between human health and the physical, chemical, biological, and psychosocial factors in the environment- information that is vitally important to public health planning, policy, and prevention strategies.