The Microbial Regulation Of Global Biogeochemical Cycles

Author : Johannes Rousk,Per Bengtson
Publisher : Frontiers E-books
Page : 242 pages
File Size : 41,7 Mb
Release : 2014-10-17
Category : Biogeochemical cycles
ISBN : 9782889192977

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The Microbial Regulation of Global Biogeochemical Cycles by Johannes Rousk,Per Bengtson Pdf

Global biogeochemical cycles of carbon and nutrients are increasingly affected by human activities. So far, modeling has been central for our understanding of how this will affect ecosystem functioning and the biogeochemical cycling of carbon and nutrients. These models have been forced to adopt a reductive approach built on the flow of carbon and nutrients between pools that are difficult or even impossible to verify with empirical evidence. Furthermore, while some of these models include the response in physiology, ecology and biogeography of primary producers to environmental change, the microbial part of the ecosystem is generally poorly represented or lacking altogether. The principal pool of carbon and nutrients in soil is the organic matter. The turnover of this reservoir is governed by microorganisms that act as catalytic converters of environmental conditions into biogeochemical cycling of carbon and nutrients. The dependency of this conversion activity on individual environmental conditions such as pH, moisture and temperature has been frequently studied. On the contrary, only rarely have the microorganisms involved in carrying out the processes been identified, and one of the biggest challenges for advancing our understanding of biogeochemical processes is to identify the microorganisms carrying out a specific set of metabolic processes and how they partition their carbon and nutrient use. We also need to identify the factors governing these activities and if they result in feedback mechanisms that alter the growth, activity and interaction between primary producers and microorganisms. By determining how different groups of microorganisms respond to individual environmental conditions by allocating carbon and nutrients to production of biomass, CO2 and other products, a mechanistic as well as quantitative understanding of formation and decomposition of organic matter, and the production and consumption of greenhouse gases, can be achieved. In this Research Topic, supported by the Swedish research councils' programme "Biodiversity and Ecosystem Services in a Changing Landscape" (BECC), we intend to promote this alternative framework to address how cycling of carbon and nutrients will be altered in a changing environment from the first-principle mechanisms that drive them – namely the ecology, physiology and biogeography of microorganisms – and on up to emerging global biogeochemical patterns. This novel and unconventional approach has the potential to generate fresh insights that can open up new horizons and stimulate rapid conceptual development in our basic understanding of the regulating factors for global biogeochemical cycles. The vision for the research topic is to facilitate such progress by bringing together leading scientists as proponents of several disciplines. By bridging Microbial Ecology and Biogeochemistry, connecting microbial activities at the micro-scale to carbon fluxes at the ecosystem-scale, and linking above- and belowground ecosystem functioning, we can leap forward from the current understanding of the global biogeochemical cycles.

Author : Butcher
Publisher : Academic Press
Page : 376 pages
File Size : 48,7 Mb
Release : 1992-08-12
Category : Science
ISBN : 9780080954707

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Global biogeochemical cycles by Butcher Pdf

Global biogeochemical cycles

Author : Ernst-Detlef Schulze,Martin Heimann,Sandy Harrison,Elisabeth Holland,Jonathan Lloyd,Ian Colin Prentice,David S. Schimel
Publisher : Elsevier
Page : 350 pages
File Size : 55,5 Mb
Release : 2001-08-10
Category : Science
ISBN : 0080507409

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Global Biogeochemical Cycles in the Climate System by Ernst-Detlef Schulze,Martin Heimann,Sandy Harrison,Elisabeth Holland,Jonathan Lloyd,Ian Colin Prentice,David S. Schimel Pdf

The interactions of biogeochemical cycles influence and maintain our climate system. Land use and fossil fuel emissions are currently impacting the biogeochemical cycles of carbon, nitrogen and sulfur on land, in the atmosphere, and in the oceans. This edited volume brings together 27 scholarly contributions on the state of our knowledge of earth system interactions among the oceans, land, and atmosphere. A unique feature of this treatment is the focus on the paleoclimatic and paleobiotic context for investigating these complex interrelationships. * Eight-page colour insert to highlight the latest research * A unique feature of this treatment is the focus on the paleoclimatic context for investigating these complex interrelationships.

Author : Hui Li,Yu Luo,Mikhail Semenov ,Ye Deng,Yakov Kuzyakov
Publisher : Frontiers Media SA
Page : 154 pages
File Size : 47,6 Mb
Release : 2023-11-15
Category : Science
ISBN : 9782832539118

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Microbial Regulation of Soil Carbon Cycling in Terrestrial Ecosystems by Hui Li,Yu Luo,Mikhail Semenov ,Ye Deng,Yakov Kuzyakov Pdf

Author : Tom Fenchel,Gary M. King,Thomas Henry Blackburn
Publisher : Academic Press
Page : 319 pages
File Size : 51,6 Mb
Release : 2012-07-27
Category : Science
ISBN : 9780124158368

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Bacterial Biogeochemistry by Tom Fenchel,Gary M. King,Thomas Henry Blackburn Pdf

Bacterial Biogeochemistry, Third Edition focuses on bacterial metabolism and its relevance to the environment, including the decomposition of soil, food chains, nitrogen fixation, assimilation and reduction of carbon nitrogen and sulfur, and microbial symbiosis. The scope of the new edition has broadened to provide a historical perspective, and covers in greater depth topics such as bioenergetic processes, characteristics of microbial communities, spatial heterogeneity, transport mechanisms, microbial biofilms, extreme environments and evolution of biogeochemical cycles. Provides up-to-date coverage with an enlarged scope, a new historical perspective, and coverage in greater depth of topics of special interest Covers interactions between microbial processes, atmospheric composition and the earth's greenhouse properties Completely rewritten to incorporate all the advances and discoveries of the last 20 years such as applications in the exploration for ore deposits and oil and in remediation of environmental pollution

Author : Pabulo H. Rampelotto
Publisher : Springer
Page : 448 pages
File Size : 48,5 Mb
Release : 2018-10-12
Category : Science
ISBN : 9783319690780

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Molecular Mechanisms of Microbial Evolution by Pabulo H. Rampelotto Pdf

One of the most profound paradigms that have transformed our understanding about life over the last decades was the acknowledgement that microorganisms play a central role in shaping the past and present environments on Earth and the nature of all life forms. Each organism is the product of its history and all extant life traces back to common ancestors, which were microorganisms. Nowadays, microorganisms represent the vast majority of biodiversity on Earth and have survived nearly 4 billion years of evolutionary change. Microbial evolution occurred and continues to take place in a great variety of environmental conditions. However, we still know little about the processes of evolution as applied to microorganisms and microbial populations. In addition, the molecular mechanisms by which microorganisms communicate/interact with each other and with multicellular organisms remains poorly understood. Such patterns of microbe-host interaction are essential to understand the evolution of microbial symbiosis and pathogenesis.Recent advances in DNA sequencing, high-throughput technologies, and genetic manipulation systems have enabled studies that directly characterize the molecular and genomic bases of evolution, producing data that are making us change our view of the microbial world. The notion that mutations in the coding regions of genomes are, in combination with selective forces, the main contributors to biodiversity needs to be re-examined as evidence accumulates, indicating that many non-coding regions that contain regulatory signals show a high rate of variation even among closely related organisms. Comparative analyses of an increasing number of closely related microbial genomes have yielded exciting insight into the sources of microbial genome variability with respect to gene content, gene order and evolution of genes with unknown functions. Furthermore, laboratory studies (i.e. experimental microbial evolution) are providing fundamental biological insight through direct observation of the evolution process. They not only enable testing evolutionary theory and principles, but also have applications to metabolic engineering and human health. Overall, these studies ranging from viruses to Bacteria to microbial Eukaryotes are illuminating the mechanisms of evolution at a resolution that Darwin, Delbruck and Dobzhansky could barely have imagined. Consequently, it is timely to review and highlight the progress so far as well as discuss what remains unknown and requires future research. This book explores the current state of knowledge on the molecular mechanisms of microbial evolution with a collection of papers written by authors who are leading experts in the field.

Author : S. Snigdha,Sabu Thomas,E. K. Radhakrishnan,Nandakumar Kalarikkal
Publisher : Springer Nature
Page : 170 pages
File Size : 48,8 Mb
Release : 2020-05-11
Category : Technology & Engineering
ISBN : 9789811546303

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Engineered Antimicrobial Surfaces by S. Snigdha,Sabu Thomas,E. K. Radhakrishnan,Nandakumar Kalarikkal Pdf

This volume looks at the different aspects involved in controlling microbial growth and the techniques employed in obtaining sterile surfaces. It covers research on coatings, nano-materials, herbal materials, naturally occurring antimicrobials in designing antimicrobial surfaces. It discusses issues of antibiotic resistance, synthesis techniques, toxicity, and current and potential applications of antimicrobial surfaces, and this book will serve as a useful reference to a broad range of scientists, industrial practitioners, graduate and undergraduate students, and other professionals in the fields of polymer science and engineering, materials science, surface science, bioengineering and chemical engineering.

Author : Raghvendra Pratap Singh,Geetanjali Manchanda,Kaushik Bhattacharjee,Hovik Panosyan
Publisher : Springer Nature
Page : 375 pages
File Size : 50,6 Mb
Release : 2022-01-01
Category : Science
ISBN : 9789811656170

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Microbes in Microbial Communities by Raghvendra Pratap Singh,Geetanjali Manchanda,Kaushik Bhattacharjee,Hovik Panosyan Pdf

The book overviews the complex interactions amongst the microbes and their possible applications. Emphasis has been made to include a wide spectrum of experimental and theoretical contributions from eminent researchers in the field. Microbial communities are the assemblages of microorganisms of various species which live together in the same environment and continuously interact with each other. The microbial cells in communities display unique phenotypes that affect the survival and reproduction of other cells present around them. These phenotypes constitute the social adaptations that drive the interactions between microbial cells. The interactions, further determine the productivity, stability and the ability of community to resist the environmental perturbations. These microbial communities live with extremely competitive niche and fight for their survival and genetic persistence. But they frequently appear in niche with multifaceted and interactive webs rather than the planktonic nature. This can be within the same species or with different species, or even with diverse genera and families. It either a competitive winner community whereas the “weaker” strain goes extinct or a competitor that coexist with their metabolic secretory potentials or a separator that assigned their own community territorial niches. Sometimes, it can be neutral or tritagonist. These microbial associations within the microbiome provides the foundation for diverse forms of microbial ecology and determined the applied perspectives for agriculture, clinical and industrial sectors. This book will be useful to postgraduate students, researchers from academic as well as industry working in the field of microbial exploration with keen interest in survival factors and mechanism of their survival by various ecological and functional strategies.

Author : D. K. Choudhary,Arti Mishra,Ajit Varma
Publisher : Springer Nature
Page : 737 pages
File Size : 49,8 Mb
Release : 2021-10-13
Category : Science
ISBN : 9783030768638

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Climate Change and the Microbiome by D. K. Choudhary,Arti Mishra,Ajit Varma Pdf

This book highlights the impact of climate change on the soil microbiome and its subsequent effects on plant health, soil-plant dynamics, and the ecosphere. It also discusses emerging ideas to counteract these effects, e.g., through agricultural applications of functional microbes, to ensure a sustainable ecosystem. Climate change is altering the soil microbiome distributions and thus the interactions in microbiome and plant‐soil microorganism. Improvement of our understanding of microbe-microbe and plant-microbe interaction under changing climatic conditions is essential, because the overall impact of these interactions under varying adverse environmental conditions is lacking. This book has been designed to understand the impact of climate change, i.e., mainly salt and drought stress, on the soil microbiome and its impact on plant, yield, and the ecosphere. The book is organized into four parts: The first part reviews the impact of climate change on the diversity and richness of the soil microbiome. The second part addresses effects of climate change on plant health. The third part discusses effects on soil-plant dynamics and functionality, e.g., soil productivity. The final part deals with the effects of climate change on ecosystem functioning and also discusses potential solutions. The book will appeal to students and researchers working in the area of soil science, agriculture, molecular biology, plant physiology, and biotechnology.

Author : Magalí Martí Genero
Publisher : Linköping University Electronic Press
Page : 60 pages
File Size : 43,9 Mb
Release : 2017-05-17
Category : Electronic
ISBN : 9789176855331

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Microbial Communities in Boreal Peatlands by Magalí Martí Genero Pdf

Myrmarker har en stor roll i regleringen av den globala kolbalansen och koncentrationerna av koldioxid och metan i atmosfären, vilket gör dem till speciellt viktiga ekosystem ur ett klimatförandringsperspektiv. Förändringar av myrmarker genom naturlig utveckling eller antropogen påverkan kan därför få långtgående störningar av myrars klimatreglerande funktion. Mikroorganismer har en avgörande roll i biogeokemiska processer genom att t ex bryta ned organisk material i mark och därmed styra kolets kretslopp. För att förstå hur myrsystemen reagerar på störningar är det därför väsentligt att veta hur mikroorganismsamhällena reagerar genom förändringar i sammansättning och biogeokemisk aktivitet. Målet för studierna, som ligger till grund för denna avhandling, var att undersöka hur mikroorganismsamhällen i myrar reagerar på uppvärmning genom klimatförändring och ökade kväve- (N) och svavel- (S) halter i nederbörd. High through-put sekvensering användes för att studera taxonomiska och funktionella egenskaper hos mikroorganismerna i myrar och quantative PCR användes för att mer specifikt studera de metanbildande arkeorna. Två fältkampanjer vardera omfattande tre ombrotrofa myrar med olika klimatförhållanden och olika mängder N och S inederbörden användes för att undersöka lokala och storskaliga effekter på myrars mikrobiella samhällen. Resultaten visade att latudinell variation i geoklimatologiska förhållanden (temperatur ochnederbördsmängd) och deposition av näringsämnen hade en påverkan på sammansättningen av de mikrobiella samhällena och aktiva metanbildare förr än variationen i den kemiska miljön inom varje specifik myr. Myrväxtsamhällenas sammansättning för en specifik myr visades sig i stor utsträckning styra sammansättningen av motsvarande mikrobiella samhälle i torvprofilen. Detta framgick klart av i en analys av samexisterande nätverk av mikroorganismsamhällen och motsvarande växtsamhällen i en studie av tre geografiskt skilda myrar med olika kvävedeposition. Effekterna av klimatförändring och nederbörd med olika mängder av N och S studerades mer specifikt genom att analysera de mikrobiellasamhällena i ett långliggande (18 år) försök. Påverkan av var och en av dessa manipulationer antingen förstärktes eller minskades, när de förekom i kombinationer. Ökad kvävedeposition var den faktor som hade starkast effekt. De långvariga störningarna medförde stora förändringar i den mikrobiella taxonomin inom samhällena. Detta återspeglades dock inte i den fysiologiska kapaciteten, vilket visar att det finns en stark buffring i myrarnas mikrobiella funktion. Detta tyder på att framtida utveckling av myrar i relation till olika störningar sannolikt inte kommer att påverka myrarnas roll för kolbalans och växthusgasutbyte med atmosfären. Peatlands play a substantial role in regulating the global carbon balance and concentrations of the greenhouse gases CO2 and CH4 in the atmosphere, and are thus of utmost importance from a climate change perspective. Any changes of peatland functions due to natural or anthropogenic perturbations may result in changes in these ecosystem services. Soil microbial communities are essential drivers of biogeochemical processes, including the carbon cycle. In order to fully understand the effect of environmental perturbations on peatland functions, it is essential to understand how microbial communities are affected. The aim of the research presented in this thesis was to investigate the responses of the peat microbial communities to climate change and increased precipitation of nitrogen(N) and sulfur (S) compounds. High-throughput sequencing approaches were used to investigate the taxonomic and functional composition of microbial communities, and quantitative PCR was used to specifically target the methanogen community. Two field studies including three ombrotrophic peatlands each that differed in climatological conditions and atmospheric N and S depositions, were used to investigate and compare the effect of large- and local-scale environmental conditions on microbial communities. The results show that the variation in geo-climatological (temperature and precipitation) and atmospheric deposition conditions along the latitudinal gradient modulate the peat microbial community composition and the abundance of active methanogens to a greater extent thansite-related microhabitats. Furthermore, a tight coupling between the plant community composition of a site and the composition of its microbial community was observed, and was found to be mainly driven by plants rather than microorganisms. These co-occurrence networks are strongly affected by seasonal climate variability and the interactions between species in colder areas are more sensitive to climate change. The long-term effects of warming and increased N and S depositions on the peat microbial communities were further investigated using an 18-year in-situ peatland experiment simulating these perturbations. The impacts of each of these perturbations on the microbial community were found to either multiply or counteract one another, with enhanced N deposition being the most important factor. While the long-term perturbations resulted in a substantial shift in the taxonomic composition of microbial communities, only minor changes occurred in genome-encoded functional traits, indicating a functional redundancy. This could act as a buffer maintaining ecosystem functioning when challenged by multiple stressors, and could limit future changes in greenhouse gases and carbonexchange.

Author : Rahul Datta,Ram Swaroop Meena,Shamina Imran Pathan,Maria Teresa Ceccherini
Publisher : Springer Nature
Page : 498 pages
File Size : 44,6 Mb
Release : 2019-08-24
Category : Nature
ISBN : 9789811372643

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Carbon and Nitrogen Cycling in Soil by Rahul Datta,Ram Swaroop Meena,Shamina Imran Pathan,Maria Teresa Ceccherini Pdf

Several textbooks and edited volumes are currently available on general soil fertility but‚ to date‚ none have been dedicated to the study of “Sustainable Carbon and Nitrogen Cycling in Soil.” Yet this aspect is extremely important, considering the fact that the soil, as the ‘epidermis of the Earth’ (geodermis)‚ is a major component of the terrestrial biosphere. This book addresses virtually every aspect of C and N cycling, including: general concepts on the diversity of microorganisms and management practices for soil, the function of soil’s structure-function-ecosystem, the evolving role of C and N, cutting-edge methods used in soil microbial ecological studies, rhizosphere microflora, the role of organic matter (OM) in agricultural productivity, C and N transformation in soil, biological nitrogen fixation (BNF) and its genetics, plant-growth-promoting rhizobacteria (PGPRs), PGPRs and their role in sustainable agriculture, organic agriculture, etc. The book’s main objectives are: (1) to explain in detail the role of C and N cycling in sustaining agricultural productivity and its importance to sustainable soil management; (2) to show readers how to restore soil health with C and N; and (3) to help them understand the matching of C and N cycling rules from a climatic perspective. Given its scope, the book offers a valuable resource for educators, researchers, and policymakers, as well as undergraduate and graduate students of soil science, soil microbiology, agronomy, ecology, and the environmental sciences. Gathering cutting-edge contributions from internationally respected researchers, it offers authoritative content on a broad range of topics, which is supplemented by a wealth of data, tables, figures, and photographs. Moreover, it provides a roadmap for sustainable approaches to food and nutritional security, and to soil sustainability in agricultural systems, based on C and N cycling in soil systems.

Author : Jay Shankar Singh,Gamini Seneviratne
Publisher : Springer
Page : 316 pages
File Size : 46,8 Mb
Release : 2017-02-14
Category : Nature
ISBN : 9783319497242

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Agro-Environmental Sustainability by Jay Shankar Singh,Gamini Seneviratne Pdf

This two-volume work is a testament to the increasing interest in the role of microbes in sustainable agriculture and food security. Advances in microbial technologies are explored in chapters dealing with topics such as carbon sequestration, soil fertility management, sustainable crop production, and microbial signaling networks. Volume I is a collection of research findings that invites readers to examine the application of microbes in reinstating degraded ecosystems and also in establishing sustainable croplands. Highly readable entries attempt to close the knowledge gap between soil microbial associations and sustainable agriculture. An increase in the global population with changing climate is leading to environments of various abiotic and biotic stresses for agricultural crops. It therefore becomes important to identify the techniques to improve soil fertility and function using different microbial groups such as actinobacteria, microalgae, fluorescent pseudomonads and cyanobacterial systems. These are examined in this volume in greater detail. This work is a significant contribution to research in this increasingly important discipline, and will appeal to researchers in microbiology, agriculture, environmental sciences, and soil and crop sciences.

Author : Silvia Pajares,Brendan J.M. Bohannan,Valeria Souza
Publisher : Frontiers Media SA
Page : 175 pages
File Size : 49,9 Mb
Release : 2017-01-13
Category : Electronic book
ISBN : 9782889450671

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The Role of Microbial Communities in Tropical Ecosystems by Silvia Pajares,Brendan J.M. Bohannan,Valeria Souza Pdf

Tropical ecosystems are different in important ways from those of temperate regions. They are a major reservoir of plant and animal biodiversity and play important roles in global climate regulation and biogeochemical cycling. They are also under great threat due to the conversion of tropical ecosystems to other uses. Thus, in the context of global change, it is crucial to understand how environmental factors, biogeographic patterns, and land use changes interact to influence the structure and function of microbial communities in these ecosystems. The contributions to this Research Topic showcase the current knowledge regarding microbial ecology in tropical ecosystems, identify many challenges and questions that remain to be addressed and open up new horizons in our understanding of the environmental and anthropological factors controlling microbial communities in these important ecosystems.

Author : Anonim
Publisher : Unknown
Page : 0 pages
File Size : 54,5 Mb
Release : 2017
Category : Electronic
ISBN : OCLC:1368418934

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The Role of Microbial Communities in Tropical Ecosystems by Anonim Pdf

Tropical ecosystems are different in important ways from those of temperate regions. They are a major reservoir of plant and animal biodiversity and play important roles in global climate regulation and biogeochemical cycling. They are also under great threat due to the conversion of tropical ecosystems to other uses. Thus, in the context of global change, it is crucial to understand how environmental factors, biogeographic patterns, and land use changes interact to influence the structure and function of microbial communities in these ecosystems. The contributions to this Research Topic showcase the current knowledge regarding microbial ecology in tropical ecosystems, identify many challenges and questions that remain to be addressed and open up new horizons in our understanding of the environmental and anthropological factors controlling microbial communities in these important ecosystems.Tropical ecosystems are different in important ways from those of temperate regions. They are a major reservoir of plant and animal biodiversity and play important roles in global climate regulation and biogeochemical cycling. They are also under great threat due to the conversion of tropical ecosystems to other uses. Thus, in the context of global change, it is crucial to understand how environmental factors, biogeographic patterns, and land use changes interact to influence the structure and function of microbial communities in these ecosystems. The contributions to this Research Topic showcase the current knowledge regarding microbial ecology in tropical ecosystems, identify many challenges and questions that remain to be addressed and open up new horizons in our understanding of the environmental and anthropological factors controlling microbial communities in these important ecosystems.

Author : Pradeep Verma
Publisher : Springer Nature
Page : 728 pages
File Size : 51,9 Mb
Release : 2022-03-07
Category : Science
ISBN : 9789811652141

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Industrial Microbiology and Biotechnology by Pradeep Verma Pdf

Industrial microbiology utilizes microorganisms to produce industrially important products in a more sustainable way, as opposed to the traditional chemical and energy intensive processes. The present book is an attempt to provide its readers with compiled and updated information in the area of Industrial Microbiology and Biotechnology. This book provides the basics of microbiology and how it has been exploited at an industrial scale. The book focuses on the role of biotechnological advances that directly impact the industrial production of several bioactive compounds using microbes-based methods under a controlled and regulated environment. On one hand, this book presents detailed information on the basics of microbiology such as types of microbes and their applications, bioreactor design, fermentation techniques, strain improvement strategies, etc. At the same time it also provides recent and updated information on industrial production, recovery, and applications of enzymes, alcohols, organic acids, steroids as a drug precursor, etc., using microbial biotechnological approaches. The book presents an overview of modern technological advances for the generation of energy (biomethane, bioethanol, and bioelectricity) and resource recovery from waste. It also highlights the application of CRISPR-based technologies in the industrial microbiology sector. This book is developed with the motive to benefit students, academicians, as well as researchers. The book will also find interests among microbiologists, biotechnologists, environmentalists, and engineers working in the application of the microbes-based approach for the development of greener technologies.