The Role Of Synaptic Tagging And Capture For Memory Dynamics In Spiking Neural Networks

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The Role of Synaptic Tagging and Capture for Memory Dynamics in Spiking Neural Networks

Author : Jannik Luboeinski
Publisher : Unknown
Page : 201 pages
File Size : 51,9 Mb
Release : 2021-09-02
Category : Science
ISBN : 8210379456XXX

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The Role of Synaptic Tagging and Capture for Memory Dynamics in Spiking Neural Networks by Jannik Luboeinski Pdf

Memory serves to process and store information about experiences such that this information can be used in future situations. The transfer from transient storage into long-term memory, which retains information for hours, days, and even years, is called consolidation. In brains, information is primarily stored via alteration of synapses, so-called synaptic plasticity. While these changes are at first in a transient early phase, they can be transferred to a late phase, meaning that they become stabilized over the course of several hours. This stabilization has been explained by so-called synaptic tagging and capture (STC) mechanisms. To store and recall memory representations, emergent dynamics arise from the synaptic structure of recurrent networks of neurons. This happens through so-called cell assemblies, which feature particularly strong synapses. It has been proposed that the stabilization of such cell assemblies by STC corresponds to so-called synaptic consolidation, which is observed in humans and other animals in the first hours after acquiring a new memory. The exact connection between the physiological mechanisms of STC and memory consolidation remains, however, unclear. It is equally unknown which influence STC mechanisms exert on further cognitive functions that guide behavior. On timescales of minutes to hours (that means, the timescales of STC) such functions include memory improvement, modification of memories, interference and enhancement of similar memories, and transient priming of certain memories. Thus, diverse memory dynamics may be linked to STC, which can be investigated by employing theoretical methods based on experimental data from the neuronal and the behavioral level. In this thesis, we present a theoretical model of STC-based memory consolidation in recurrent networks of spiking neurons, which are particularly suited to reproduce biologically realistic dynamics. Furthermore, we combine the STC mechanisms with calcium dynamics, which have been found to guide the major processes of early-phase synaptic plasticity in vivo. In three included research articles as well as additional sections, we develop this model and investigate how it can account for a variety of behavioral effects. We find that the model enables the robust implementation of the cognitive memory functions mentioned above. The main steps to this are: 1. demonstrating the formation, consolidation, and improvement of memories represented by cell assemblies, 2. showing that neuromodulator-dependent STC can retroactively control whether information is stored in a temporal or rate-based neural code, and 3. examining interaction of multiple cell assemblies with transient and attractor dynamics in different organizational paradigms. In summary, we demonstrate several ways by which STC controls the late-phase synaptic structure of cell assemblies. Linking these structures to functional dynamics, we show that our STC-based model implements functionality that can be related to long-term memory. Thereby, we provide a basis for the mechanistic explanation of various neuropsychological effects. Keywords: synaptic plasticity; synaptic tagging and capture; spiking recurrent neural networks; memory consolidation; long-term memory

The Role of Synaptic Tagging and Capture for Memory Dynamics in Spiking Neural Networks

Author : Jannik Luboeinski
Publisher : Unknown
Page : 0 pages
File Size : 50,5 Mb
Release : 2021
Category : Electronic
ISBN : OCLC:1266548342

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The Role of Synaptic Tagging and Capture for Memory Dynamics in Spiking Neural Networks by Jannik Luboeinski Pdf

Memory serves to process and store information about experiences such that this information can be used in future situations. The transfer from transient storage into long-term memory, which retains information for hours, days, and even years, is called consolidation. In brains, information is primarily stored via alteration of synapses, so-called synaptic plasticity. While these changes are at first in a transient early phase, they can be transferred to a late phase, meaning that they become stabilized over the course of several hours. This stabilization has been explained by so-called syn...

Synaptic Tagging and Capture

Author : Sreedharan Sajikumar
Publisher : Springer Nature
Page : 507 pages
File Size : 49,7 Mb
Release : 2024-06-28
Category : Electronic
ISBN : 9783031548642

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Synaptic Tagging and Capture by Sreedharan Sajikumar Pdf

Spike-timing dependent plasticity

Author : Henry Markram,Wulfram Gerstner,Per Jesper Sjöström
Publisher : Frontiers E-books
Page : 575 pages
File Size : 49,7 Mb
Release : 2024-06-28
Category : Electronic
ISBN : 9782889190430

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Spike-timing dependent plasticity by Henry Markram,Wulfram Gerstner,Per Jesper Sjöström Pdf

Hebb's postulate provided a crucial framework to understand synaptic alterations underlying learning and memory. Hebb's theory proposed that neurons that fire together, also wire together, which provided the logical framework for the strengthening of synapses. Weakening of synapses was however addressed by "not being strengthened", and it was only later that the active decrease of synaptic strength was introduced through the discovery of long-term depression caused by low frequency stimulation of the presynaptic neuron. In 1994, it was found that the precise relative timing of pre and postynaptic spikes determined not only the magnitude, but also the direction of synaptic alterations when two neurons are active together. Neurons that fire together may therefore not necessarily wire together if the precise timing of the spikes involved are not tighly correlated. In the subsequent 15 years, Spike Timing Dependent Plasticity (STDP) has been found in multiple brain brain regions and in many different species. The size and shape of the time windows in which positive and negative changes can be made vary for different brain regions, but the core principle of spike timing dependent changes remain. A large number of theoretical studies have also been conducted during this period that explore the computational function of this driving principle and STDP algorithms have become the main learning algorithm when modeling neural networks. This Research Topic will bring together all the key experimental and theoretical research on STDP.

Value and Reward Based Learning in Neurobots

Author : Jeffrey L Krichmar,Florian Röhrbein
Publisher : Frontiers Media SA
Page : 159 pages
File Size : 53,7 Mb
Release : 2015-03-05
Category : Neurosciences. Biological psychiatry. Neuropsychiatry
ISBN : 9782889194315

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Value and Reward Based Learning in Neurobots by Jeffrey L Krichmar,Florian Röhrbein Pdf

Organisms are equipped with value systems that signal the salience of environmental cues to their nervous system, causing a change in the nervous system that results in modification of their behavior. These systems are necessary for an organism to adapt its behavior when an important environmental event occurs. A value system constitutes a basic assumption of what is good and bad for an agent. These value systems have been effectively used in robotic systems to shape behavior. For example, many robots have used models of the dopaminergic system to reinforce behavior that leads to rewards. Other modulatory systems that shape behavior are acetylcholine’s effect on attention, norepinephrine’s effect on vigilance, and serotonin’s effect on impulsiveness, mood, and risk. Moreover, hormonal systems such as oxytocin and its effect on trust constitute as a value system. This book presents current research involving neurobiologically inspired robots whose behavior is: 1) Shaped by value and reward learning, 2) adapted through interaction with the environment, and 3) shaped by extracting value from the environment.

From Neuron to Cognition via Computational Neuroscience

Author : Michael A. Arbib,James J. Bonaiuto
Publisher : MIT Press
Page : 808 pages
File Size : 55,8 Mb
Release : 2016-11-04
Category : Science
ISBN : 9780262335270

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From Neuron to Cognition via Computational Neuroscience by Michael A. Arbib,James J. Bonaiuto Pdf

A comprehensive, integrated, and accessible textbook presenting core neuroscientific topics from a computational perspective, tracing a path from cells and circuits to behavior and cognition. This textbook presents a wide range of subjects in neuroscience from a computational perspective. It offers a comprehensive, integrated introduction to core topics, using computational tools to trace a path from neurons and circuits to behavior and cognition. Moreover, the chapters show how computational neuroscience—methods for modeling the causal interactions underlying neural systems—complements empirical research in advancing the understanding of brain and behavior. The chapters—all by leaders in the field, and carefully integrated by the editors—cover such subjects as action and motor control; neuroplasticity, neuromodulation, and reinforcement learning; vision; and language—the core of human cognition. The book can be used for advanced undergraduate or graduate level courses. It presents all necessary background in neuroscience beyond basic facts about neurons and synapses and general ideas about the structure and function of the human brain. Students should be familiar with differential equations and probability theory, and be able to pick up the basics of programming in MATLAB and/or Python. Slides, exercises, and other ancillary materials are freely available online, and many of the models described in the chapters are documented in the brain operation database, BODB (which is also described in a book chapter). Contributors Michael A. Arbib, Joseph Ayers, James Bednar, Andrej Bicanski, James J. Bonaiuto, Nicolas Brunel, Jean-Marie Cabelguen, Carmen Canavier, Angelo Cangelosi, Richard P. Cooper, Carlos R. Cortes, Nathaniel Daw, Paul Dean, Peter Ford Dominey, Pierre Enel, Jean-Marc Fellous, Stefano Fusi, Wulfram Gerstner, Frank Grasso, Jacqueline A. Griego, Ziad M. Hafed, Michael E. Hasselmo, Auke Ijspeert, Stephanie Jones, Daniel Kersten, Jeremie Knuesel, Owen Lewis, William W. Lytton, Tomaso Poggio, John Porrill, Tony J. Prescott, John Rinzel, Edmund Rolls, Jonathan Rubin, Nicolas Schweighofer, Mohamed A. Sherif, Malle A. Tagamets, Paul F. M. J. Verschure, Nathan Vierling-Claasen, Xiao-Jing Wang, Christopher Williams, Ransom Winder, Alan L. Yuille

Inhibitory Synaptic Plasticity

Author : Melanie A. Woodin,Arianna Maffei
Publisher : Springer Science & Business Media
Page : 191 pages
File Size : 45,7 Mb
Release : 2010-11-02
Category : Medical
ISBN : 9781441969781

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Inhibitory Synaptic Plasticity by Melanie A. Woodin,Arianna Maffei Pdf

This volume will explore the most recent findings on cellular mechanisms of inhibitory plasticity and its functional role in shaping neuronal circuits, their rewiring in response to experience, drug addiction and in neuropathology. Inhibitory Synaptic Plasticity will be of particular interest to neuroscientists and neurophysiologists.

Local Cortical Circuits

Author : Moshe Abeles
Publisher : Springer Science & Business Media
Page : 105 pages
File Size : 40,8 Mb
Release : 2012-12-06
Category : Medical
ISBN : 9783642817083

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Local Cortical Circuits by Moshe Abeles Pdf

Neurophysiologists are often accused by colleagues in the physical sci ences of designing experiments without any underlying hypothesis. This impression is attributable to the ease of getting lost in the ever-increasing sea of professional publications which do not state explicitly the ultimate goal of the research. On the other hand, many of the explicit models for brain function in the past were so far removed from experimental reality that they had very little impact on further research. It seems that one needs much intimate experience with the real nerv-. ous system before a reasonable model can be suggested. It would have been impossible for Copernicus to suggest his model of the solar system without the detailed observations and tabulations of star and planet motion accu mulated by the preceeding generations. This need for intimate experience with the nervous system before daring to put forward some hypothesis about its mechanism of action is especially apparent when theorizing about cerebral cortex function. There is widespread agreement that processing of information in the cor tex is associated with complex spatio-temporal patterns of activity. Yet the vast majority of experimental work is based on single neuron recordings or on recordings made with gross electrodes to which tens of thousands of neurons contribute in an unknown fashion. Although these experiments have taught us a great deal about the organization and function of the cor tex, they have not enabled us to examine the spatio-temporal organization of neuronal activity in any detail.

Spiking Neuron Models

Author : Wulfram Gerstner,Werner M. Kistler
Publisher : Cambridge University Press
Page : 498 pages
File Size : 43,7 Mb
Release : 2002-08-15
Category : Computers
ISBN : 0521890799

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Spiking Neuron Models by Wulfram Gerstner,Werner M. Kistler Pdf

Neurons in the brain communicate by short electrical pulses, the so-called action potentials or spikes. How can we understand the process of spike generation? How can we understand information transmission by neurons? What happens if thousands of neurons are coupled together in a seemingly random network? How does the network connectivity determine the activity patterns? And, vice versa, how does the spike activity influence the connectivity pattern? These questions are addressed in this 2002 introduction to spiking neurons aimed at those taking courses in computational neuroscience, theoretical biology, biophysics, or neural networks. The approach will suit students of physics, mathematics, or computer science; it will also be useful for biologists who are interested in mathematical modelling. The text is enhanced by many worked examples and illustrations. There are no mathematical prerequisites beyond what the audience would meet as undergraduates: more advanced techniques are introduced in an elementary, concrete fashion when needed.

Synaptic Plasticity in the Hippocampus

Author : Helmut L. Haas,György Buzsaki
Publisher : Springer Science & Business Media
Page : 219 pages
File Size : 54,9 Mb
Release : 2012-12-06
Category : Medical
ISBN : 9783642732027

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Synaptic Plasticity in the Hippocampus by Helmut L. Haas,György Buzsaki Pdf

This is the second time that I have had the honor of opening an interna tional symposium dedicated to the functions of the hippocampus here in Pecs. It was a pleasure to greet the participants in the hope that their valuable contributions will make this meeting a tradition in this town. As one of the hosts of the symposium, I had the sorrowful duty to remind you of the absence of a dear colleague, Professor Graham God dard. His tragic and untimely death represents the irreparable loss of both a friend and an excellent researcher. This symposium is dedicated to his memory. If I compare the topics of the lectures of this symposium with those of the previous one, a striking difference becomes apparent. A dominating tendency of the previous symposium was to attempt to define hippocam pal function or to offer data relevant to supporting or rejecting existing theoretical positions. No such tendency is reflected in the titles of the present symposium, in which most of the contributions deal with hip pocampal phenomena at the most elementary level. Electrical, biochemi cal, biophysical, and pharmacological events at the synaptic, membrane, or intracellular level are analyzed without raising the question of what kind of integral functions these elementary phenomena are a part of.

Cortex: Statistics and Geometry of Neuronal Connectivity

Author : Valentino Braitenberg,Almut Schüz
Publisher : Springer Science & Business Media
Page : 243 pages
File Size : 53,5 Mb
Release : 2013-03-14
Category : Medical
ISBN : 9783662037331

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Cortex: Statistics and Geometry of Neuronal Connectivity by Valentino Braitenberg,Almut Schüz Pdf

By means of quantitative analysis of the tissue components in the cortex of the mouse, this book presents an overall picture of the cortical network which is then related to various theories on cortical function. Centering around the idea of a diffuse network in a fairly homogeneous population of excitatory neurons, that of the pyramidal cells, it shows that the whole organisation in the cortical skeleton of pryramidal cells corresponds well with the idea of an associative memory and with the theory of cell assemblies. Provides the reader with information on quantitative neuroanatomy and also on the methods used, in particular those that vary from the norm.

Foundations of Human Memory

Author : Michael Jacob Kahana
Publisher : Oxford University Press
Page : 368 pages
File Size : 55,5 Mb
Release : 2014-05-01
Category : Psychology
ISBN : 9780199715527

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Foundations of Human Memory by Michael Jacob Kahana Pdf

Foundations of Human Memory provides an introduction to the scientific study of human memory with an emphasis on both the major theories of memory and the laboratory studies that have been used to test those theories and inspire their further development. Written with the undergraduate student in mind, the text assumes no specific background in the subject, but a general familiarity with scientific method and quantitative approaches to the treatment of data. Foundations of human memory is organized around the major empirical paradigms used to study memory in the laboratory and the theories used to explain data obtained using those paradigms. The text begins with a focus on memory for individual items, building up to memory for associations between items, and finally to memory for entire sequences of items and the problem of memory search. Several major theories of memory are considered in detail, including strength theory, summed-similarity theory, neural network based theories, retrieved-context theory, and theories based on the division of memory into separate short-term and long-term storage systems. The text emphasizes basic research over applied problems, but brings in real-world examples and neuroscientific evidence as appropriate.

Neural Engineering

Author : Chris Eliasmith,Charles H. Anderson
Publisher : MIT Press
Page : 384 pages
File Size : 41,8 Mb
Release : 2003
Category : Bioinformatics
ISBN : 0262550601

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Neural Engineering by Chris Eliasmith,Charles H. Anderson Pdf

A synthesis of current approaches to adapting engineering tools to the study of neurobiological systems.

Neurotrophic Factors

Author : Gary R. Lewin,Bruce D. Carter
Publisher : Springer Science & Business Media
Page : 514 pages
File Size : 50,5 Mb
Release : 2014-03-25
Category : Medical
ISBN : 9783642451065

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Neurotrophic Factors by Gary R. Lewin,Bruce D. Carter Pdf

This book provides critical reviews of the role of neurotrophins and their receptors in a wide variety of diseases including neurodegenerative diseases like Huntington’s syndrome, cognitive function, psychiatric disorders such as clinical depression, Rett syndrome, motoneurone disease, spinal cord injury, pain, metabolic disease and cardiovascular disease. It also contains contributions from leaders in the field dealing with the basic biology, transcriptional and post-translational regulation of the neurotrophins and their receptors. The present book will review all recent areas of progress in the study of neurotrophins and their biological roles.

Working Memory Capacity

Author : Nelson Cowan
Publisher : Psychology Press
Page : 238 pages
File Size : 43,7 Mb
Release : 2016-04-14
Category : Psychology
ISBN : 9781317232384

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Working Memory Capacity by Nelson Cowan Pdf

The idea of one's memory "filling up" is a humorous misconception of how memory in general is thought to work; it actually has no capacity limit. However, the idea of a "full brain" makes more sense with reference to working memory, which is the limited amount of information a person can hold temporarily in an especially accessible form for use in the completion of almost any challenging cognitive task. This groundbreaking book explains the evidence supporting Cowan's theoretical proposal about working memory capacity, and compares it to competing perspectives. Cognitive psychologists profoundly disagree on how working memory is limited: whether by the number of units that can be retained (and, if so, what kind of units and how many), the types of interfering material, the time that has elapsed, some combination of these mechanisms, or none of them. The book assesses these hypotheses and examines explanations of why capacity limits occur, including vivid biological, cognitive, and evolutionary accounts. The book concludes with a discussion of the practical importance of capacity limits in daily life. This 10th anniversary Classic Edition will continue to be accessible to a wide range of readers and serve as an invaluable reference for all memory researchers.