A Computer Scientist S Guide To Cell Biology

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A Computer Scientist's Guide to Cell Biology

William W. Cohen
A Computer Scientist s Guide to Cell Biology Book PDF

Author : William W. Cohen
Publisher : Springer Science & Business Media
Page : 104 pages
File Size : 52,8 Mb
Release : 2007-07-23
Category : Computers
ISBN : 9780387482781

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A Computer Scientist's Guide to Cell Biology by William W. Cohen Pdf

This book is designed specifically as a guide for Computer Scientists needing an introduction to Cell Biology. The text explores three different facets of biology: biological systems, experimental methods, and language and nomenclature. The author discusses what biologists are trying to determine from their experiments, how various experimental procedures are used and how they relate to accepted concepts in computer science, and the vocabulary necessary to read and understand current literature in biology. The book is an invaluable reference tool and an excellent starting point for a more comprehensive examination of cell biology.

A Computer Scientist's Guide to Cell Biology

William Cohen,Charles Cohen
A Computer Scientist s Guide to Cell Biology Book PDF

Author : William Cohen,Charles Cohen
Publisher : Springer
Page : 0 pages
File Size : 40,7 Mb
Release : 2024-08-17
Category : Science
ISBN : 3031559061

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A Computer Scientist's Guide to Cell Biology by William Cohen,Charles Cohen Pdf

Unlike the structured world of computer science, biology is complex, evolving, and often lacks clean abstract models. This book aims to serve as a guide for computer scientists who need to understand cell biology, breaking the field into three parts: biological mechanics, experimental methods, and language/nomenclature. While biological mechanics, which investigates cellular-level details, is covered by many texts, this book also focuses on experimental methods – how biologists conduct experiments and gather data - and on helping the reader understand the language and terminology of biology, which is rich but challenging for non-biologists. A Computer Scientist's Guide to Cell Biology uses a metaphor of biology as a strange land with an unfamiliar language and customs. The goal of the book is to provide a high-level introduction to cell biology, simplifying concepts and relating them to familiar ideas from computer science, so that working computer scientists can more effectively understand read recent research papers and results. This Second Edition contains a number of updates, including discussions of CRISPR, advances in DNA Sequencing, and mRNA vaccines. It serves as an easy-to-read travel guide for computer scientists navigating the intricate and sometimes perplexing terrain of cell biology, offering insights into experimental methods and helping bridge the gap between the structured world of computer science and the complexities of biological systems.

A Computer Scientist's Guide to Cell Biology

William W. Cohen
A Computer Scientist s Guide to Cell Biology Book PDF

Author : William W. Cohen
Publisher : Springer
Page : 100 pages
File Size : 52,8 Mb
Release : 2007-06-25
Category : Computers
ISBN : 038748275X

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A Computer Scientist's Guide to Cell Biology by William W. Cohen Pdf

This book is designed specifically as a guide for Computer Scientists needing an introduction to Cell Biology. The text explores three different facets of biology: biological systems, experimental methods, and language and nomenclature. The author discusses what biologists are trying to determine from their experiments, how various experimental procedures are used and how they relate to accepted concepts in computer science, and the vocabulary necessary to read and understand current literature in biology. The book is an invaluable reference tool and an excellent starting point for a more comprehensive examination of cell biology.

Molecular Communication

Tadashi Nakano,Andrew W. Eckford,Tokuko Haraguchi
Molecular Communication Book PDF

Author : Tadashi Nakano,Andrew W. Eckford,Tokuko Haraguchi
Publisher : Cambridge University Press
Page : 192 pages
File Size : 44,9 Mb
Release : 2013-09-12
Category : Technology & Engineering
ISBN : 9781107292383

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Molecular Communication by Tadashi Nakano,Andrew W. Eckford,Tokuko Haraguchi Pdf

This comprehensive guide, by pioneers in the field, brings together, for the first time, everything a new researcher, graduate student or industry practitioner needs to get started in molecular communication. Written with accessibility in mind, it requires little background knowledge, and provides a detailed introduction to the relevant aspects of biology and information theory, as well as coverage of practical systems. The authors start by describing biological nanomachines, the basics of biological molecular communication and the microorganisms that use it. They then proceed to engineered molecular communication and the molecular communication paradigm, with mathematical models of various types of molecular communication and a description of the information and communication theory of molecular communication. Finally, the practical aspects of designing molecular communication systems are presented, including a review of the key applications. Ideal for engineers and biologists looking to get up to speed on the current practice in this growing field.

Using the Biological Literature

Diane Schmidt
Using the Biological Literature Book PDF

Author : Diane Schmidt
Publisher : CRC Press
Page : 414 pages
File Size : 40,9 Mb
Release : 2014-04-14
Category : Language Arts & Disciplines
ISBN : 9781466558571

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Using the Biological Literature by Diane Schmidt Pdf

The biological sciences cover a broad array of literature types, from younger fields like molecular biology with its reliance on recent journal articles, genomic databases, and protocol manuals to classic fields such as taxonomy with its scattered literature found in monographs and journals from the past three centuries. Using the Biological Literature: A Practical Guide, Fourth Edition is an annotated guide to selected resources in the biological sciences, presenting a wide-ranging list of important sources. This completely revised edition contains numerous new resources and descriptions of all entries including textbooks. The guide emphasizes current materials in the English language and includes retrospective references for historical perspective and to provide access to the taxonomic literature. It covers both print and electronic resources including monographs, journals, databases, indexes and abstracting tools, websites, and associations—providing users with listings of authoritative informational resources of both classical and recently published works. With chapters devoted to each of the main fields in the basic biological sciences, this book offers a guide to the best and most up-to-date resources in biology. It is appropriate for anyone interested in searching the biological literature, from undergraduate students to faculty, researchers, and librarians. The guide includes a supplementary website dedicated to keeping URLs of electronic and web-based resources up to date, a popular feature continued from the third edition.

New Biology for Engineers and Computer Scientists

Aydin Tözeren,Stephen W. Byers
New Biology for Engineers and Computer Scientists Book PDF

Author : Aydin Tözeren,Stephen W. Byers
Publisher : Prentice Hall
Page : 0 pages
File Size : 45,9 Mb
Release : 2004
Category : Bioinformatics
ISBN : 0130664634

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New Biology for Engineers and Computer Scientists by Aydin Tözeren,Stephen W. Byers Pdf

"New Biology for Engineers and Computer Scientists focuses on the essentials of new biology, namely, genes and proteins, cells as the basic units of life, cell division, and animal development. The book introduces cells as robust complex networks of genes and proteins and adopts a systems view to discuss communication of cells with other cells and with the external environment. In keeping with the "hands on" approach common in engineering classes, assignment sections in each chapter illustrate the link between biology and engineering."--BOOK JACKET.

Quantum Biological Information Theory

Ivan B. Djordjevic
Quantum Biological Information Theory Book PDF

Author : Ivan B. Djordjevic
Publisher : Springer
Page : 278 pages
File Size : 41,7 Mb
Release : 2015-10-05
Category : Technology & Engineering
ISBN : 9783319228167

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Quantum Biological Information Theory by Ivan B. Djordjevic Pdf

This book is a self-contained, tutorial-based introduction to quantum information theory and quantum biology. It serves as a single-source reference to the topic for researchers in bioengineering, communications engineering, electrical engineering, applied mathematics, biology, computer science, and physics. The book provides all the essential principles of the quantum biological information theory required to describe the quantum information transfer from DNA to proteins, the sources of genetic noise and genetic errors as well as their effects. Integrates quantum information and quantum biology concepts; Assumes only knowledge of basic concepts of vector algebra at undergraduate level; Provides a thorough introduction to basic concepts of quantum information processing, quantum information theory, and quantum biology; Includes in-depth discussion of the quantum biological channel modelling, quantum biological channel capacity calculation, quantum models of aging, quantum models of evolution, quantum models on tumor and cancer development, quantum modeling of bird navigation compass, quantum aspects of photosynthesis, quantum biological error correction.

Software Tools and Algorithms for Biological Systems

Hamid Arabnia,Quoc-Nam Tran
Software Tools and Algorithms for Biological Systems Book PDF

Author : Hamid Arabnia,Quoc-Nam Tran
Publisher : Springer Science & Business Media
Page : 776 pages
File Size : 50,8 Mb
Release : 2011-03-23
Category : Science
ISBN : 9781441970466

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Software Tools and Algorithms for Biological Systems by Hamid Arabnia,Quoc-Nam Tran Pdf

“Software Tools and Algorithms for Biological Systems" is composed of a collection of papers received in response to an announcement that was widely distributed to academicians and practitioners in the broad area of computational biology and software tools. Also, selected authors of accepted papers of BIOCOMP’09 proceedings (International Conference on Bioinformatics and Computational Biology: July 13-16, 2009; Las Vegas, Nevada, USA) were invited to submit the extended versions of their papers for evaluation.

Catalyzing Inquiry at the Interface of Computing and Biology

National Research Council,Division on Engineering and Physical Sciences,Computer Science and Telecommunications Board,Committee on Frontiers at the Interface of Computing and Biology
Catalyzing Inquiry at the Interface of Computing and Biology Book PDF

Author : National Research Council,Division on Engineering and Physical Sciences,Computer Science and Telecommunications Board,Committee on Frontiers at the Interface of Computing and Biology
Publisher : National Academies Press
Page : 469 pages
File Size : 51,9 Mb
Release : 2006-01-01
Category : Science
ISBN : 9780309096126

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Catalyzing Inquiry at the Interface of Computing and Biology by National Research Council,Division on Engineering and Physical Sciences,Computer Science and Telecommunications Board,Committee on Frontiers at the Interface of Computing and Biology Pdf

Advances in computer science and technology and in biology over the last several years have opened up the possibility for computing to help answer fundamental questions in biology and for biology to help with new approaches to computing. Making the most of the research opportunities at the interface of computing and biology requires the active participation of people from both fields. While past attempts have been made in this direction, circumstances today appear to be much more favorable for progress. To help take advantage of these opportunities, this study was requested of the NRC by the National Science Foundation, the Department of Defense, the National Institutes of Health, and the Department of Energy. The report provides the basis for establishing cross-disciplinary collaboration between biology and computing including an analysis of potential impediments and strategies for overcoming them. The report also presents a wealth of examples that should encourage students in the biological sciences to look for ways to enable them to be more effective users of computing in their studies.

Biological Knowledge Discovery Handbook

Mourad Elloumi,Albert Y. Zomaya
Biological Knowledge Discovery Handbook Book PDF

Author : Mourad Elloumi,Albert Y. Zomaya
Publisher : John Wiley & Sons
Page : 1192 pages
File Size : 54,5 Mb
Release : 2015-02-04
Category : Computers
ISBN : 9781118853726

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Biological Knowledge Discovery Handbook by Mourad Elloumi,Albert Y. Zomaya Pdf

The first comprehensive overview of preprocessing, mining,and postprocessing of biological data Molecular biology is undergoing exponential growth in both thevolume and complexity of biological data—and knowledgediscovery offers the capacity to automate complex search and dataanalysis tasks. This book presents a vast overview of the mostrecent developments on techniques and approaches in the field ofbiological knowledge discovery and data mining (KDD)—providingin-depth fundamental and technical field information on the mostimportant topics encountered. Written by top experts, Biological Knowledge DiscoveryHandbook: Preprocessing, Mining, and Postprocessing of BiologicalData covers the three main phases of knowledge discovery (datapreprocessing, data processing—also known as datamining—and data postprocessing) and analyzes both verificationsystems and discovery systems. BIOLOGICAL DATA PREPROCESSING Part A: Biological Data Management Part B: Biological Data Modeling Part C: Biological Feature Extraction Part D Biological Feature Selection BIOLOGICAL DATA MINING Part E: Regression Analysis of Biological Data Part F Biological Data Clustering Part G: Biological Data Classification Part H: Association Rules Learning from Biological Data Part I: Text Mining and Application to Biological Data Part J: High-Performance Computing for Biological DataMining Combining sound theory with practical applications in molecularbiology, Biological Knowledge Discovery Handbook is idealfor courses in bioinformatics and biological KDD as well as forpractitioners and professional researchers in computer science,life science, and mathematics.

Wetware

Dennis Bray
Wetware Book PDF

Author : Dennis Bray
Publisher : Yale University Press
Page : 280 pages
File Size : 51,9 Mb
Release : 2009-05-26
Category : Science
ISBN : 9780300155440

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Wetware by Dennis Bray Pdf

“A beautifully written journey into the mechanics of the world of the cell, and even beyond, exploring the analogy with computers in a surprising way” (Denis Noble, author of Dance to the Tune of Life). How does a single-cell creature, such as an amoeba, lead such a sophisticated life? How does it hunt living prey, respond to lights, sounds, and smells, and display complex sequences of movements without the benefit of a nervous system? This book offers a startling and original answer. In clear, jargon-free language, Dennis Bray taps the findings from the discipline of systems biology to show that the internal chemistry of living cells is a form of computation. Cells are built out of molecular circuits that perform logical operations, as electronic devices do, but with unique properties. Bray argues that the computational juice of cells provides the basis for all distinctive properties of living systems: it allows organisms to embody in their internal structure an image of the world, and this accounts for their adaptability, responsiveness, and intelligence. In Wetware, Bray offers imaginative, wide-ranging, and perceptive critiques of robotics and complexity theory, as well as many entertaining and telling anecdotes. For the general reader, the practicing scientist, and all others with an interest in the nature of life, this book is an exciting portal to some of biology’s latest discoveries and ideas. “Drawing on the similarities between Pac-Man and an amoeba and efforts to model the human brain, this absorbing read shows that biologists and engineers have a lot to learn from working together.” —Discover magazine “Wetware will get the reader thinking.” —Science magazine

Guide to Teaching Computer Science

Orit Hazzan,Tami Lapidot,Noa Ragonis
Guide to Teaching Computer Science Book PDF

Author : Orit Hazzan,Tami Lapidot,Noa Ragonis
Publisher : Springer Science & Business Media
Page : 260 pages
File Size : 45,8 Mb
Release : 2011-04-23
Category : Education
ISBN : 9780857294432

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Guide to Teaching Computer Science by Orit Hazzan,Tami Lapidot,Noa Ragonis Pdf

This guide presents both a conceptual framework and detailed implementation guidelines for general computer science (CS) teaching. The content is clearly written and structured to be applicable to all levels of CS education and for any teaching organization, without limiting its focus to instruction for any specific curriculum, programming language or paradigm. Features: presents an overview of research in CS education; examines strategies for teaching problem-solving, evaluating pupils, and for dealing with pupils’ misunderstandings; provides learning activities throughout the book; proposes active-learning-based classroom teaching methods, as well as methods specifically for lab-based teaching; discusses various types of questions that a CS instructor, tutor, or trainer can use for a range of different teaching situations; investigates thoroughly issues of lesson planning and course design; describes frameworks by which prospective CS teachers gain their first teaching experience.

A Cell Biologist's Guide to Modeling and Bioinformatics

Raquell M. Holmes
A Cell Biologist s Guide to Modeling and Bioinformatics Book PDF

Author : Raquell M. Holmes
Publisher : John Wiley & Sons
Page : 224 pages
File Size : 44,8 Mb
Release : 2008-02-13
Category : Science
ISBN : 047013934X

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A Cell Biologist's Guide to Modeling and Bioinformatics by Raquell M. Holmes Pdf

A step-by-step guide to using computational tools to solve problems in cell biology Combining expert discussion with examples that can be reproduced by the reader, A Cell Biologist's Guide to Modeling and Bioinformatics introduces an array of informatics tools that are available for analyzing biological data and modeling cellular processes. You learn to fully leverage public databases and create your own computational models. All that you need is a working knowledge of algebra and cellular biology; the author provides all the other tools you need to understand the necessary statistical and mathematical methods. Coverage is divided into two main categories: Molecular sequence database chapters are dedicated to gaining an understanding of tools and strategies—including queries, alignment methods, and statistical significance measures—needed to improve searches for sequence similarity, protein families, and putative functional domains. Discussions of sequence alignments and biological database searching focus on publicly available resources used for background research and the characterization of novel gene products. Modeling chapters take you through all the steps involved in creating a computational model for such basic research areas as cell cycle, calcium dynamics, and glycolysis. Each chapter introduces a new simulation tooland is based on published research. The combination creates a rich context for ongoing skill and knowledge development in modeling biological research systems. Students and professional cell biologists can develop the basic skills needed to learn computational cell biology. This unique text, with its step-by-step instruction, enables you to test and develop your new bioinformatics and modeling skills. References are provided to help you take advantage of more advanced techniques, technologies, and training.

Statistical and Evolutionary Analysis of Biological Networks

Michael P. H. Stumpf,Carsten Wiuf
Statistical and Evolutionary Analysis of Biological Networks Book PDF

Author : Michael P. H. Stumpf,Carsten Wiuf
Publisher : World Scientific
Page : 179 pages
File Size : 47,8 Mb
Release : 2010
Category : Science
ISBN : 9781848164338

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Statistical and Evolutionary Analysis of Biological Networks by Michael P. H. Stumpf,Carsten Wiuf Pdf

Networks provide a very useful way to describe a wide range of different data types in biology, physics and elsewhere. Apart from providing a convenient tool to visualize highly dependent data, networks allow stringent mathematical and statistical analysis. In recent years, much progress has been achieved to interpret various types of biological network data such as transcriptomic, metabolomic and protein interaction data as well as epidemiological data. Of particular interest is to understand the organization, complexity and dynamics of biological networks and how these are influenced by network evolution and functionality. This book reviews and explores statistical, mathematical and evolutionary theory and tools in the understanding of biological networks. The book is divided into comprehensive and self-contained chapters, each of which focuses on an important biological network type, explains concepts and theory and illustrates how these can be used to obtain insight into biologically relevant processes and questions. There are chapters covering metabolic, transcriptomic, protein interaction and epidemiological networks as well as chapters that deal with theoretical and conceptual material. The authors, who contribute to the book, are active, highly regarded and well-known in the network community.

Micro and Nano Techniques for the Handling of Biological Samples

Jaime Castillo-León,Winnie Edith Svendsen,Maria Dimaki
Micro and Nano Techniques for the Handling of Biological Samples Book PDF

Author : Jaime Castillo-León,Winnie Edith Svendsen,Maria Dimaki
Publisher : CRC Press
Page : 258 pages
File Size : 48,9 Mb
Release : 2011-08-25
Category : Medical
ISBN : 9781439827437

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Micro and Nano Techniques for the Handling of Biological Samples by Jaime Castillo-León,Winnie Edith Svendsen,Maria Dimaki Pdf

Several micro- and nanomanipulation techniques have emerged in recent decades thanks to advances in micro- and nanofabrication. For instance, the atomic force microscope (AFM) uses a nano-sized tip to image, push, pull, cut, and indent biological material in air, liquid, or vacuum. Using micro- and nanofabrication techniques, scientists can make manipulation tools, such as microgrippers and nanotweezers, on the same length scale as the biological samples. Micro and Nano Techniques for the Handling of Biological Samples reviews the different techniques available to manipulate and integrate biological materials in a controlled manner, either by sliding them along a surface (2-D manipulation), or by gripping and moving them to a new position (3-D manipulation). The advantages and drawbacks are mentioned together with examples that reflect the state-of-the-art in manipulation techniques for biological samples. Thanks to the advances in micro- and nanomanipulation techniques, the integration of biomaterials with physical transducers has been possible, giving rise to new and highly sensitive biosensing devices. Although great progress has been made, challenges are still present. To understand the complex interactions between and inside biological samples, scientists will always be working on improving technologies to manipulate, transport, sort, and integrate samples in different environments. Balanced between simplicity for the beginner and hardcore theory for the more advanced readers, this book is the ideal launching point for sharpening the scientific tools required to address these challenges.